RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SLC43A3	Q8NBI5	491 aa		23.14	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	DNAJC2	Q99543	621 aa	Known RBP	23.14	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	FBXO40	Q9UH90	709 aa		23.14	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	EXOC6B	Q9Y2D4	811 aa		23.14	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	TCF20	Q9UGU0	1960 aa	Known RBP	23.13	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	ERC2	O15083	957 aa		23.13	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	MBD4	O95243	580 aa		23.13	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	RABGGTB	P53611	331 aa		23.13	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	NOL8	Q76FK4	1167 aa	Known RBP	23.13	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	CTAGE5	O15320	804 aa		23.12	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	GTPBP6	O43824	516 aa	Predicted RBP	23.12	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	CCL23	P55773	120 aa		23.12	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	23.12	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	ARMCX2	Q7L311	632 aa		23.12	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	FTSJ3	Q8IY81	847 aa	Known RBP	23.12	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	NUP88	Q99567	741 aa	Predicted RBP	23.12	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	LRFN3	Q9BTN0	628 aa		23.12	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	IL1RAPL2	Q9NP60	686 aa		23.12	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334		F5H6K3	240 aa		23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	SMIM22	K7EJ46	135 aa		23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	POU3F3	P20264	500 aa	Predicted RBP	23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	KCNQ1	P51787	676 aa		23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	BEX3	Q00994	111 aa		23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	TNFAIP2	Q03169	654 aa		23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	KLRC3	Q07444	240 aa		23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	ITGA7	Q13683	1181 aa		23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	CXCL17	Q6UXB2	119 aa		23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	ITPRIP	Q8IWB1	547 aa		23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	CLASRP	Q8N2M8	674 aa	Known RBP	23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	CHST13	Q8NET6	341 aa		23.11	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	ZEB2	O60315	1214 aa		23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	ADD2	P35612	726 aa		23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	CEP85	Q6P2H3	762 aa		23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	CCDC144CP	Q8IYA2	1237 aa		23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	RHPN1	Q8TCX5	695 aa		23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	23.1	■■□□□ 1.29	5e-8	■■■□□ 16
CDK5RAP2-218	ENST00000491334	EPHX3	Q9H6B9	360 aa		23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	RAVER2	Q9HCJ3	691 aa	Known RBP	23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	NYAP2	Q9P242	653 aa		23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	COG5	Q9UP83	839 aa		23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	XIRP2	A4UGR9	3374 aa		23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	MYH8	P13535	1937 aa		23.1	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	UMODL1	Q5DID0	1318 aa		23.09	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	ZBBX	A8MT70	800 aa		23.09	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	MYOG	P15173	224 aa		23.09	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	ATP2A2	P16615	1042 aa	Known RBP	23.09	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	CTR9	Q6PD62	1173 aa		23.09	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	FGD4	Q96M96	766 aa		23.09	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	NOC4L	Q9BVI4	516 aa	Known RBP	23.09	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	23.09	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	AP5M1	Q9H0R1	490 aa		23.09	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	SLC4A4	Q9Y6R1	1079 aa		23.09	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	IFIT2	P09913	472 aa	Known RBP	23.08	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	TMEM67	Q5HYA8	995 aa		23.08	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	TMEM31	Q5JXX7	168 aa		23.08	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	KIFC2	Q96AC6	838 aa		23.08	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	KATNBL1	Q9H079	304 aa		23.08	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	TRPV6	Q9H1D0	765 aa		23.08	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	SLC38A10	Q9HBR0	1119 aa		23.08	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	PAG1	Q9NWQ8	432 aa		23.08	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	MTCH2	Q9Y6C9	303 aa		23.08	■■□□□ 1.29
CDK5RAP2-218	ENST00000491334	PIEZO1	Q92508	2521 aa		23.08	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	PRRC2B	Q5JSZ5	2229 aa	Known RBP	23.07	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	NDUFB10	O96000	172 aa		23.07	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	OAZ1	P54368	228 aa		23.07	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	FSCN1	Q16658	493 aa	Known RBP	23.07	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	MKNK2	Q9HBH9	465 aa		23.07	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	FEM1B	Q9UK73	627 aa		23.07	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	B4GALT4	O60513	344 aa		23.06	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	PFKM	P08237	780 aa		23.06	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	SLFNL1	Q499Z3	407 aa		23.06	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	WNT8A	Q9H1J5	351 aa		23.06	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	CLIP2	Q9UDT6	1046 aa		23.06	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	GNE	Q9Y223	722 aa	Known RBP	23.06	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	GRIN2D	O15399	1336 aa		23.06	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	TRANK1	O15050	2925 aa		23.05	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	23.05	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	ASB14	A6NK59	587 aa		23.05	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	DYNC1LI2	O43237	492 aa	Predicted RBP	23.05	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	CNTN2	Q02246	1040 aa		23.05	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	UBE3C	Q15386	1083 aa		23.05	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	TLK2	Q86UE8	772 aa		23.05	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	KIF1BP	Q96EK5	621 aa		23.05	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	REV3L	O60673	3130 aa		23.05	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	ASTN1	O14525	1302 aa		23.05	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	RFXAP	O00287	272 aa		23.04	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	TLL1	O43897	1013 aa		23.04	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	SUPT20HL2	P0C7V6	817 aa		23.04	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	FDX1	P10109	184 aa		23.04	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	ARPP21	Q9UBL0	812 aa	Predicted RBP	23.04	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334		Q9Y3F1	56 aa		23.04	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	BAZ2A	Q9UIF9	1905 aa	Known RBP	23.04	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	CA3	P07451	260 aa		23.03	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	RASA1	P20936	1047 aa		23.03	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	IQSEC1	Q6DN90	963 aa		23.03	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	FAM133A	Q8N9E0	248 aa		23.03	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	HLA-C	Q95604	372 aa		23.03	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	SCLY	Q96I15	445 aa		23.03	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	AGBL1	Q96MI9	1066 aa		23.03	■■□□□ 1.28
CDK5RAP2-218	ENST00000491334	BOLA2	Q9H3K6	86 aa		23.03	■■□□□ 1.28

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms