RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CCDC174Q6PII3 467 aa15.92■□□□□ 0.14
SMPD4-219ENST00000491128 PDILTQ8N807 584 aa15.92■□□□□ 0.14
SMPD4-219ENST00000491128 PCDHA1Q9Y5I3 950 aa15.92■□□□□ 0.14
SMPD4-219ENST00000491128 EAPPQ56P03 285 aaPredicted RBP15.92■□□□□ 0.14
SMPD4-219ENST00000491128 CSRNP2Q9H175 543 aa15.92■□□□□ 0.14
SMPD4-219ENST00000491128 C6orf50Q9HD87 102 aa15.92■□□□□ 0.14
SMPD4-219ENST00000491128 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.92■□□□□ 0.14
SMPD4-219ENST00000491128 FBXO2Q9UK22 296 aaPredicted RBP15.92■□□□□ 0.14
SMPD4-219ENST00000491128 PRR12Q9ULL5 1215 aa15.92■□□□□ 0.14
SMPD4-219ENST00000491128 LETM2Q2VYF4 491 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 SYDE2Q5VT97 1194 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 FMR1NBQ8N0W7 255 aaPredicted RBP15.91■□□□□ 0.14
SMPD4-219ENST00000491128 RGS22Q8NE09 1264 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 GMCL1Q96IK5 515 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 VWA3AA6NCI4 1184 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 SBF1O95248 1867 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 SMARCA1P28370 1054 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 FAM160A1Q05DH4 1040 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 SPP2Q13103 211 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 MTMR2Q13614 643 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 PPP4R3BQ5MIZ7 849 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 MOB2Q70IA6 237 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 APOBEC3FQ8IUX4 373 aaKnown RBP15.91■□□□□ 0.14
SMPD4-219ENST00000491128 KRI1Q8N9T8 703 aaKnown RBP15.91■□□□□ 0.14
SMPD4-219ENST00000491128 EPSTI1Q96J88 318 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 CLSTN2Q9H4D0 955 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 VCPKMTQ9H867 229 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 GOPCQ9HD26 462 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 ADARB2Q9NS39 739 aaKnown RBP15.91■□□□□ 0.14
SMPD4-219ENST00000491128 NOL7Q9UMY1 257 aaKnown RBP15.91■□□□□ 0.14
SMPD4-219ENST00000491128 MYH15Q9Y2K3 1946 aa15.91■□□□□ 0.14
SMPD4-219ENST00000491128 PPP6R2O75170 966 aa15.9■□□□□ 0.14
SMPD4-219ENST00000491128 REXO1Q8N1G1 1221 aaKnown RBP15.9■□□□□ 0.14
SMPD4-219ENST00000491128 TBCKQ8TEA7 893 aa15.9■□□□□ 0.14
SMPD4-219ENST00000491128 KINO60870 393 aaKnown RBP15.9■□□□□ 0.14
SMPD4-219ENST00000491128 ZNF202O95125 648 aa15.9■□□□□ 0.14
SMPD4-219ENST00000491128 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
SMPD4-219ENST00000491128 POTEJP0CG39 1038 aa15.9■□□□□ 0.14
SMPD4-219ENST00000491128 ADCY7P51828 1080 aa15.9■□□□□ 0.14
SMPD4-219ENST00000491128 STAT2P52630 851 aa15.9■□□□□ 0.14
SMPD4-219ENST00000491128 IL17AQ16552 155 aa15.9■□□□□ 0.14
SMPD4-219ENST00000491128 DPY19L2Q6NUT2 758 aa15.9■□□□□ 0.14
SMPD4-219ENST00000491128 TMEM60Q9H2L4 133 aa15.9■□□□□ 0.14
SMPD4-219ENST00000491128 CCNT1O60563 726 aaKnown RBP15.89■□□□□ 0.13
SMPD4-219ENST00000491128 GNA11P29992 359 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 FMR1Q06787 632 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMPD4-219ENST00000491128 MAP3K11Q16584 847 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 ISM2Q6H9L7 571 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 GJA10Q969M2 543 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 MTMR8Q96EF0 704 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 SDF4Q9BRK5 362 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 TSPY26PQ9H489 355 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 ZHX2Q9Y6X8 837 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 A0A1W2PQ27 194 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 A0A1W2PQ64 194 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 A0A1W2PQD8 194 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 CTNND1O60716 968 aaKnown RBP15.89■□□□□ 0.13
SMPD4-219ENST00000491128 PTPREP23469 700 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 CMA1P23946 247 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 HOXA13P31271 388 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-219ENST00000491128 JMYQ8N9B5 988 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 CCDC12Q8WUD4 166 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-219ENST00000491128 TBC1D5Q92609 795 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 P2RX7Q99572 595 aaKnown RBP15.89■□□□□ 0.13
SMPD4-219ENST00000491128 PSTPIP2Q9H939 334 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 DDX19AQ9NUU7 478 aaKnown RBP15.89■□□□□ 0.13
SMPD4-219ENST00000491128 PCNTO95613 3336 aa15.89■□□□□ 0.13
SMPD4-219ENST00000491128 FOXN1O15353 648 aa15.88■□□□□ 0.13
SMPD4-219ENST00000491128 KRT26Q7Z3Y9 468 aa15.88■□□□□ 0.13
SMPD4-219ENST00000491128 DCPSQ96C86 337 aaKnown RBP15.88■□□□□ 0.13
SMPD4-219ENST00000491128 MMP14P50281 582 aa15.88■□□□□ 0.13
SMPD4-219ENST00000491128 LONRF3Q496Y0 759 aa15.88■□□□□ 0.13
SMPD4-219ENST00000491128 DAGLBQ8NCG7 672 aa15.88■□□□□ 0.13
SMPD4-219ENST00000491128 SSC5DA1L4H1 1573 aa15.88■□□□□ 0.13
SMPD4-219ENST00000491128 CUTAO60888 179 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 SYKP43405 635 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 RESP18Q5W5W9 173 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 SULF1Q8IWU6 871 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 GRAMD1CQ8IYS0 662 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 ZFP91Q96JP5 570 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-219ENST00000491128 TANGO6Q9C0B7 1094 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 SRPRBQ9Y5M8 271 aaKnown RBP15.87■□□□□ 0.13
SMPD4-219ENST00000491128 A0A087X0B3 334 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 PP2D1A8MPX8 630 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 BIN1O00499 593 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 EDIL3O43854 480 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 TDP2O95551 362 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 PTPRAP18433 802 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 EPHX2P34913 555 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 NONOQ15233 471 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMPD4-219ENST00000491128 DCAF15Q66K64 600 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 FBXO11Q86XK2 927 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 KLRG1Q96E93 195 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 KCNH3Q9ULD8 1083 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 CEP131Q9UPN4 1083 aa15.87■□□□□ 0.13
SMPD4-219ENST00000491128 POLR2AP24928 1970 aaKnown RBP15.87■□□□□ 0.13
SMPD4-219ENST00000491128 POLR2DO15514 142 aaKnown RBP15.86■□□□□ 0.13
SMPD4-219ENST00000491128 HMGCS2P54868 508 aa15.86■□□□□ 0.13
SMPD4-219ENST00000491128 ZRSR1Q15695 479 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms