RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 OTUD7BQ6GQQ9 843 aa21.54■■□□□ 1.04
MCF2L-230ENST00000491028 FAM43AQ8N2R8 423 aa21.54■■□□□ 1.04
MCF2L-230ENST00000491028 ATG4CQ96DT6 458 aa21.54■■□□□ 1.04
MCF2L-230ENST00000491028 PTPN18Q99952 460 aa21.54■■□□□ 1.04
MCF2L-230ENST00000491028 SLC38A10Q9HBR0 1119 aa21.54■■□□□ 1.04
MCF2L-230ENST00000491028 VWA5AO00534 786 aa21.53■■□□□ 1.04
MCF2L-230ENST00000491028 PPFIA3O75145 1194 aa21.53■■□□□ 1.04
MCF2L-230ENST00000491028 TM4SF4P48230 202 aa21.53■■□□□ 1.04
MCF2L-230ENST00000491028 SLC4A3P48751 1232 aa21.53■■□□□ 1.04
MCF2L-230ENST00000491028 HERVK_113P62684 666 aa21.53■■□□□ 1.04
MCF2L-230ENST00000491028 PKN1Q16512 942 aa21.53■■□□□ 1.04
MCF2L-230ENST00000491028 QRICH1Q2TAL8 776 aa21.53■■□□□ 1.04
MCF2L-230ENST00000491028 SAMD1Q6SPF0 538 aaPredicted RBP21.53■■□□□ 1.04
MCF2L-230ENST00000491028 IFNL1Q8IU54 200 aa21.53■■□□□ 1.04
MCF2L-230ENST00000491028 MB21D1Q8N884 522 aa21.53■■□□□ 1.04
MCF2L-230ENST00000491028 PARK7Q99497 189 aaKnown RBP21.53■■□□□ 1.04
MCF2L-230ENST00000491028 CWC22Q9HCG8 908 aaKnown RBP21.53■■□□□ 1.04
MCF2L-230ENST00000491028 FOXD4L1Q9NU39 408 aa21.53■■□□□ 1.04
MCF2L-230ENST00000491028 CTDP1Q9Y5B0 961 aaPredicted RBP21.53■■□□□ 1.04
MCF2L-230ENST00000491028 WDR33Q9C0J8 1336 aaKnown RBP21.53■■□□□ 1.04
MCF2L-230ENST00000491028 IGF2BP3O00425 579 aaKnown RBP eCLIP21.52■■□□□ 1.04
MCF2L-230ENST00000491028 OAZ1P54368 228 aa21.52■■□□□ 1.04
MCF2L-230ENST00000491028 FAM177A1Q8N128 213 aaPredicted RBP21.52■■□□□ 1.04
MCF2L-230ENST00000491028 PIBF1Q8WXW3 757 aa21.52■■□□□ 1.04
MCF2L-230ENST00000491028 P2RX7Q99572 595 aaKnown RBP21.52■■□□□ 1.04
MCF2L-230ENST00000491028 hCG_1642624A0A1W2PR95 340 aa21.51■■□□□ 1.03
MCF2L-230ENST00000491028 PDCP20941 246 aa21.51■■□□□ 1.03
MCF2L-230ENST00000491028 MAP2K2P36507 400 aa21.51■■□□□ 1.03
MCF2L-230ENST00000491028 FBXO11Q86XK2 927 aa21.51■■□□□ 1.03
MCF2L-230ENST00000491028 SPRYD3Q8NCJ5 442 aa21.51■■□□□ 1.03
MCF2L-230ENST00000491028 RGS22Q8NE09 1264 aa21.51■■□□□ 1.03
MCF2L-230ENST00000491028 REPS2Q8NFH8 660 aa21.51■■□□□ 1.03
MCF2L-230ENST00000491028 ALG1Q9BT22 464 aa21.51■■□□□ 1.03
MCF2L-230ENST00000491028 AMNQ9BXJ7 453 aa21.51■■□□□ 1.03
MCF2L-230ENST00000491028 ATP2A1O14983 1001 aa21.5■■□□□ 1.03
MCF2L-230ENST00000491028 DTNBO60941 627 aa21.5■■□□□ 1.03
MCF2L-230ENST00000491028 AOC2O75106 756 aa21.5■■□□□ 1.03
MCF2L-230ENST00000491028 ICAM1P05362 532 aa21.5■■□□□ 1.03
MCF2L-230ENST00000491028 XBP1P17861 261 aa21.5■■□□□ 1.03
MCF2L-230ENST00000491028 PPP1R18Q6NYC8 613 aa21.5■■□□□ 1.03
MCF2L-230ENST00000491028 SMCR8Q8TEV9 937 aaPredicted RBP21.5■■□□□ 1.03
MCF2L-230ENST00000491028 SH3GLB2Q9NR46 395 aa21.5■■□□□ 1.03
MCF2L-230ENST00000491028 BARHL2Q9NY43 387 aa21.5■■□□□ 1.03
MCF2L-230ENST00000491028 PPP1R11O60927 126 aaPredicted RBP21.49■■□□□ 1.03
MCF2L-230ENST00000491028 ALDH1A1P00352 501 aa21.49■■□□□ 1.03
MCF2L-230ENST00000491028 GCLCP48506 637 aaPredicted RBP21.49■■□□□ 1.03
MCF2L-230ENST00000491028 VEGFBP49765 207 aa21.49■■□□□ 1.03
MCF2L-230ENST00000491028 SNAP25P60880 206 aa21.49■■□□□ 1.03
MCF2L-230ENST00000491028 HTRA3P83110 453 aa21.49■■□□□ 1.03
MCF2L-230ENST00000491028 WWC2Q6AWC2 1192 aa21.49■■□□□ 1.03
MCF2L-230ENST00000491028 CCDC174Q6PII3 467 aa21.49■■□□□ 1.03
MCF2L-230ENST00000491028 HEATR3Q7Z4Q2 680 aa21.49■■□□□ 1.03
MCF2L-230ENST00000491028 CCDC12Q8WUD4 166 aaPredicted RBP21.49■■□□□ 1.03
MCF2L-230ENST00000491028 ZIC5Q96T25 663 aa21.49■■□□□ 1.03
MCF2L-230ENST00000491028 ZNF214Q9UL59 606 aaPredicted RBP21.49■■□□□ 1.03
MCF2L-230ENST00000491028 RABGAP1Q9Y3P9 1069 aa21.49■■□□□ 1.03
MCF2L-230ENST00000491028 ZNF536O15090 1300 aa21.49■■□□□ 1.03
MCF2L-230ENST00000491028 CYP2C8P10632 490 aa21.48■■□□□ 1.03
MCF2L-230ENST00000491028 PDIA4P13667 645 aaKnown RBP21.48■■□□□ 1.03
MCF2L-230ENST00000491028 TAF1CQ15572 869 aaPredicted RBP21.48■■□□□ 1.03
MCF2L-230ENST00000491028 CCDC148Q8NFR7 591 aa21.48■■□□□ 1.03
MCF2L-230ENST00000491028 GPKOWQ92917 476 aaPredicted RBP eCLIP21.48■■□□□ 1.03
MCF2L-230ENST00000491028 C8orf76Q96K31 380 aa21.48■■□□□ 1.03
MCF2L-230ENST00000491028 TEX13BQ9BXU2 312 aa21.48■■□□□ 1.03
MCF2L-230ENST00000491028 ABCB11O95342 1321 aa21.48■■□□□ 1.03
MCF2L-230ENST00000491028 RBBP6Q7Z6E9 1792 aaKnown RBP21.48■■□□□ 1.03
MCF2L-230ENST00000491028 STXBP3O00186 592 aa21.47■■□□□ 1.03
MCF2L-230ENST00000491028 TRIM29Q14134 588 aa21.47■■□□□ 1.03
MCF2L-230ENST00000491028 TMEM132BQ14DG7 1078 aa21.47■■□□□ 1.03
MCF2L-230ENST00000491028 AIFM3Q96NN9 605 aa21.47■■□□□ 1.03
MCF2L-230ENST00000491028 RAVER2Q9HCJ3 691 aaKnown RBP21.47■■□□□ 1.03
MCF2L-230ENST00000491028 CCPG1Q9ULG6 757 aa21.47■■□□□ 1.03
MCF2L-230ENST00000491028 PCDHA1Q9Y5I3 950 aa21.47■■□□□ 1.03
MCF2L-230ENST00000491028 NAPAP54920 295 aa21.46■■□□□ 1.03
MCF2L-230ENST00000491028 TKFCQ3LXA3 575 aa21.46■■□□□ 1.03
MCF2L-230ENST00000491028 LARP1BQ659C4 914 aaKnown RBP21.46■■□□□ 1.03
MCF2L-230ENST00000491028 CPXCR1Q8N123 301 aa21.46■■□□□ 1.03
MCF2L-230ENST00000491028 VPS54Q9P1Q0 977 aa21.46■■□□□ 1.03
MCF2L-230ENST00000491028 BTBD7Q9P203 1132 aa21.46■■□□□ 1.03
MCF2L-230ENST00000491028 ADGRA2Q96PE1 1338 aa21.46■■□□□ 1.03
MCF2L-230ENST00000491028 ESYT2A0FGR8 921 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 CNMDO75829 334 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 COPB2P35606 906 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 STAT3P40763 770 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 USH1GQ495M9 461 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 SNRNP48Q6IEG0 339 aaKnown RBP21.45■■□□□ 1.02
MCF2L-230ENST00000491028 POTEEQ6S8J3 1075 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 TEX2Q8IWB9 1127 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 COA7Q96BR5 231 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 AGBL1Q96MI9 1066 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 PAGR1Q9BTK6 254 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 ZFYVE28Q9HCC9 887 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 RBPJLQ9UBG7 517 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 MORF4L1Q9UBU8 362 aa21.45■■□□□ 1.02
MCF2L-230ENST00000491028 MRPL11Q9Y3B7 192 aaKnown RBP21.45■■□□□ 1.02
MCF2L-230ENST00000491028 SYT1P21579 422 aa21.44■■□□□ 1.02
MCF2L-230ENST00000491028 CALML3P27482 149 aa21.44■■□□□ 1.02
MCF2L-230ENST00000491028 TYW1BQ6NUM6 668 aa21.44■■□□□ 1.02
MCF2L-230ENST00000491028 FBXO18Q8NFZ0 1043 aa21.44■■□□□ 1.02
MCF2L-230ENST00000491028 PHF20Q9BVI0 1012 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms