RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 CSF1RP07333 972 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 CCT5P48643 541 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 GRIK3Q13003 919 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 CCDC96Q2M329 555 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 SPATA1Q5VX52 437 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 HNRNPLLQ8WVV9 542 aaKnown RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 FOXP1Q9H334 677 aaPredicted RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 SRPRBQ9Y5M8 271 aaKnown RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 GCKP35557 465 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 KRT2P35908 639 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 TSR1Q2NL82 804 aaKnown RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 IFIT1BQ5T764 474 aaKnown RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 MED15Q96RN5 788 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 CCDC87Q9NVE4 849 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 TACC3Q9Y6A5 838 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 ABCC6O95255 1503 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 A0A087X0B3 334 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 ENC1O14682 589 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 ACTN4O43707 911 aaKnown RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 PDE8AO60658 829 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 ABL1P00519 1130 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 ZNF18P17022 549 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 IBSPP21815 317 aaPredicted RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 NLRP5P59047 1200 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 NR1I3Q14994 352 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 EARS2Q5JPH6 523 aaKnown RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 CATIPQ7Z7H3 387 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 CAGE1Q8TC20 777 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 ESR2Q92731 530 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 PAGE5Q96GU1 130 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
BRD9-209ENST00000490814 TNS2Q63HR2 1409 aa11.36□□□□□ -0.59
BRD9-209ENST00000490814 BAZ2BQ9UIF8 2168 aaKnown RBP11.35□□□□□ -0.59
BRD9-209ENST00000490814 PLEKHA8P1O95397 391 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 FXR1P51114 621 aaKnown RBP eCLIP11.35□□□□□ -0.59
BRD9-209ENST00000490814 PPARAQ07869 468 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 PIK3AP1Q6ZUJ8 805 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 TRIM74Q86UV6 250 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 TRIM73Q86UV7 250 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 AMIGO3Q86WK7 504 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 MYO1BO43795 1136 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 KRT9P35527 623 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 UBXN1Q04323 297 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 CABS1Q96KC9 395 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 RAB21Q9UL25 225 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 JAG2Q9Y219 1238 aa11.35□□□□□ -0.59
BRD9-209ENST00000490814 A0A1B0GUA9 196 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 EME2A4GXA9 379 aaPredicted RBP11.34□□□□□ -0.59
BRD9-209ENST00000490814 EBAG9O00559 213 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 PTGDRQ13258 359 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 MSANTD4Q8NCY6 345 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 MYO6Q9UM54 1294 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 IGHMBP2P38935 993 aaKnown RBP11.34□□□□□ -0.59
BRD9-209ENST00000490814 CNGA4Q8IV77 575 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 GSPT2Q8IYD1 628 aaKnown RBP11.34□□□□□ -0.59
BRD9-209ENST00000490814 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 TFR2Q9UP52 801 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 A0A1B0GTH6 734 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 MFAP3LO75121 409 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 ERCC5P28715 1186 aaPredicted RBP11.34□□□□□ -0.59
BRD9-209ENST00000490814 CLNS1AP54105 237 aaKnown RBP11.34□□□□□ -0.59
BRD9-209ENST00000490814 STIM1Q13586 685 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 TTC38Q5R3I4 469 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 ARMC3Q5W041 872 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 IQCA1Q86XH1 822 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 RPUSD2Q8IZ73 545 aaKnown RBP11.34□□□□□ -0.59
BRD9-209ENST00000490814 TMTC2Q8N394 836 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 TRIML1Q8N9V2 468 aa11.34□□□□□ -0.59
BRD9-209ENST00000490814 NIP7Q9Y221 180 aaKnown RBP eCLIP11.34□□□□□ -0.59
BRD9-209ENST00000490814 TCRBV5S4A2TA0A5A2 114 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 WNT7AO00755 349 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 SNUPNO95149 360 aaKnown RBP11.33□□□□□ -0.6
BRD9-209ENST00000490814 USP5P45974 858 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 RPS6KA3P51812 740 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 FKBP15Q5T1M5 1219 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
BRD9-209ENST00000490814 TRIM10Q9UDY6 481 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 MAGEB6P1A0A0J9YX57 407 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 TMCO5BA8MYB1 307 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 CHUKO15111 745 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 CYP19A1P11511 503 aaPredicted RBP11.33□□□□□ -0.6
BRD9-209ENST00000490814 GYG1P46976 350 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 WHAMMP3Q1A5X7 153 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 FAM47AQ5JRC9 791 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 KIAA1328Q86T90 577 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 PANX2Q96RD6 677 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 HDAC6Q9UBN7 1215 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 STK36Q9NRP7 1315 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 GLI3P10071 1580 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 FRMD3A2A2Y4 597 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 SRGAP2O75044 1071 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 DYNLL1P63167 89 aaKnown RBP11.33□□□□□ -0.6
BRD9-209ENST00000490814 ICA1Q05084 483 aa11.33□□□□□ -0.6
BRD9-209ENST00000490814 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.6
BRD9-209ENST00000490814 KRT31Q15323 416 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms