RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.32■■□□□ 1.32
SREBF1-216ENST00000490796 BADQ92934 168 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 INCENPQ9NQS7 918 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 STARD7Q9NQZ5 370 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 RNF146Q9NTX7 359 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 ANAPC4Q9UJX5 808 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 SYNRGQ9UMZ2 1314 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 PQBP1O60828 265 aaKnown RBP23.31■■□□□ 1.32
SREBF1-216ENST00000490796 ADAMTS4O75173 837 aa23.31■■□□□ 1.32
SREBF1-216ENST00000490796 DUSP11O75319 330 aaKnown RBP23.31■■□□□ 1.32
SREBF1-216ENST00000490796 CLTBP09497 229 aa23.31■■□□□ 1.32
SREBF1-216ENST00000490796 AAMPQ13685 434 aa23.31■■□□□ 1.32
SREBF1-216ENST00000490796 ALX1Q15699 326 aa23.31■■□□□ 1.32
SREBF1-216ENST00000490796 CCDC96Q2M329 555 aa23.31■■□□□ 1.32
SREBF1-216ENST00000490796 RRP12Q5JTH9 1297 aaKnown RBP23.31■■□□□ 1.32
SREBF1-216ENST00000490796 CCDC174Q6PII3 467 aa23.31■■□□□ 1.32
SREBF1-216ENST00000490796 MOXD2PA6NHM9 499 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 FOXP2O15409 715 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 NMT2O60551 498 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 PLA2G6O60733 806 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 ALAS1P13196 640 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 ACLYP53396 1101 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 ARMCX2Q7L311 632 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 TICAM2Q86XR7 235 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 RILPL2Q969X0 211 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 VTI1AQ96AJ9 217 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 AGBL1Q96MI9 1066 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 TRERF1Q96PN7 1200 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 LNPKQ9C0E8 428 aa23.3■■□□□ 1.32
SREBF1-216ENST00000490796 RWDD1Q9H446 243 aaPredicted RBP23.3■■□□□ 1.32
SREBF1-216ENST00000490796 DCDC2CA8MYV0 355 aa23.29■■□□□ 1.32
SREBF1-216ENST00000490796 ORC4O43929 436 aa23.29■■□□□ 1.32
SREBF1-216ENST00000490796 C6orf222P0C671 652 aaPredicted RBP23.29■■□□□ 1.32
SREBF1-216ENST00000490796 RAG1P15918 1043 aa23.29■■□□□ 1.32
SREBF1-216ENST00000490796 KCNA10Q16322 511 aa23.29■■□□□ 1.32
SREBF1-216ENST00000490796 CCDC144BQ3MJ40 725 aa23.29■■□□□ 1.32
SREBF1-216ENST00000490796 NOL8Q76FK4 1167 aaKnown RBP23.29■■□□□ 1.32
SREBF1-216ENST00000490796 SH3RF1Q7Z6J0 888 aa23.29■■□□□ 1.32
SREBF1-216ENST00000490796 PCSK9Q8NBP7 692 aaKnown RBP23.29■■□□□ 1.32
SREBF1-216ENST00000490796 FAM227BQ96M60 508 aa23.29■■□□□ 1.32
SREBF1-216ENST00000490796 IL17RBQ9NRM6 502 aa23.29■■□□□ 1.32
SREBF1-216ENST00000490796 TMEM39AQ9NV64 488 aa23.29■■□□□ 1.32
SREBF1-216ENST00000490796 MTMR10Q9NXD2 777 aa23.29■■□□□ 1.32
SREBF1-216ENST00000490796 A0A0D9SFI3 127 aa23.28■■□□□ 1.32
SREBF1-216ENST00000490796 TRIM43BA6NCK2 446 aa23.28■■□□□ 1.32
SREBF1-216ENST00000490796 FGAP02671 866 aa23.28■■□□□ 1.32
SREBF1-216ENST00000490796 SHHQ15465 462 aa23.28■■□□□ 1.32
SREBF1-216ENST00000490796 B4GALNT3Q6L9W6 998 aa23.28■■□□□ 1.32
SREBF1-216ENST00000490796 CCDC144CPQ8IYA2 1237 aa23.28■■□□□ 1.32
SREBF1-216ENST00000490796 DCAF4Q8WV16 495 aa23.28■■□□□ 1.32
SREBF1-216ENST00000490796 TRIM43Q96BQ3 446 aaPredicted RBP23.28■■□□□ 1.32
SREBF1-216ENST00000490796 GLT1D1Q96MS3 346 aa23.28■■□□□ 1.32
SREBF1-216ENST00000490796 PRR12Q9ULL5 1215 aa23.28■■□□□ 1.32
SREBF1-216ENST00000490796 ASB14A6NK59 587 aa23.27■■□□□ 1.32
SREBF1-216ENST00000490796 MFAP1P55081 439 aaKnown RBP23.27■■□□□ 1.32
SREBF1-216ENST00000490796 CNTN2Q02246 1040 aa23.27■■□□□ 1.32
SREBF1-216ENST00000490796 NMIQ13287 307 aaPredicted RBP23.27■■□□□ 1.32
SREBF1-216ENST00000490796 KLHDC9Q8NEP7 349 aa23.27■■□□□ 1.32
SREBF1-216ENST00000490796 A1CFQ9NQ94 594 aaKnown RBP23.27■■□□□ 1.32
SREBF1-216ENST00000490796 CCPG1Q9ULG6 757 aa23.27■■□□□ 1.32
SREBF1-216ENST00000490796 STXBP5LQ9Y2K9 1186 aa23.27■■□□□ 1.32
SREBF1-216ENST00000490796 TOP1P11387 765 aaKnown RBP23.26■■□□□ 1.31
SREBF1-216ENST00000490796 SNAP25P60880 206 aa23.26■■□□□ 1.31
SREBF1-216ENST00000490796 FAM133AQ8N9E0 248 aa23.26■■□□□ 1.31
SREBF1-216ENST00000490796 ZNF536O15090 1300 aa23.26■■□□□ 1.31
SREBF1-216ENST00000490796 HSPD1P10809 573 aaKnown RBP23.25■■□□□ 1.31
SREBF1-216ENST00000490796 GNASQ5JWF2 1037 aa23.25■■□□□ 1.31
SREBF1-216ENST00000490796 C9orf50Q5SZB4 431 aa23.25■■□□□ 1.31
SREBF1-216ENST00000490796 ZNF697Q5TEC3 545 aa23.25■■□□□ 1.31
SREBF1-216ENST00000490796 FAM109BQ6ICB4 259 aaPredicted RBP23.25■■□□□ 1.31
SREBF1-216ENST00000490796 NSMFQ6X4W1 530 aa23.25■■□□□ 1.31
SREBF1-216ENST00000490796 FGD4Q96M96 766 aa23.25■■□□□ 1.31
SREBF1-216ENST00000490796 MROH7Q68CQ1 1323 aa23.25■■□□□ 1.31
SREBF1-216ENST00000490796 CCDC171Q6TFL3 1326 aa23.25■■□□□ 1.31
SREBF1-216ENST00000490796 MYADML2A6NDP7 307 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 KIAA0355O15063 1070 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 ASGR1P07306 291 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 FGRP09769 529 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 CST5P28325 142 aaPredicted RBP23.24■■□□□ 1.31
SREBF1-216ENST00000490796 GJA9P57773 515 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 HAND2P61296 217 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 TNFAIP2Q03169 654 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 MFSD6Q6ZSS7 791 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 TOX2Q96NM4 488 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 ELP1O95163 1332 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 LTBP2Q14767 1821 aa23.24■■□□□ 1.31
SREBF1-216ENST00000490796 MCM3APO60318 1980 aa23.23■■□□□ 1.31
SREBF1-216ENST00000490796 SYDE2Q5VT97 1194 aa23.23■■□□□ 1.31
SREBF1-216ENST00000490796 RASGRP2Q7LDG7 609 aa23.23■■□□□ 1.31
SREBF1-216ENST00000490796 ANKRD33Q7Z3H0 272 aa23.23■■□□□ 1.31
SREBF1-216ENST00000490796 ZNF589Q86UQ0 364 aaPredicted RBP23.23■■□□□ 1.31
SREBF1-216ENST00000490796 FAM161BQ96MY7 647 aa23.23■■□□□ 1.31
SREBF1-216ENST00000490796 TMEM47Q9BQJ4 181 aa23.23■■□□□ 1.31
SREBF1-216ENST00000490796 AP5M1Q9H0R1 490 aa23.23■■□□□ 1.31
SREBF1-216ENST00000490796 UPF3AQ9H1J1 476 aaKnown RBP23.23■■□□□ 1.31
SREBF1-216ENST00000490796 RNF41Q9H4P4 317 aaPredicted RBP23.23■■□□□ 1.31
SREBF1-216ENST00000490796 ZMYM6O95789 1325 aa23.23■■□□□ 1.31
SREBF1-216ENST00000490796 SOWAHBA6NEL2 793 aa23.22■■□□□ 1.31
SREBF1-216ENST00000490796 ICAM1P05362 532 aa23.22■■□□□ 1.31
SREBF1-216ENST00000490796 PCP11498 1178 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms