RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 CRHR2Q13324 411 aa16.49■□□□□ 0.23
CLDN11-209ENST00000489485 PLS1Q14651 629 aa16.49■□□□□ 0.23
CLDN11-209ENST00000489485 CDC37Q16543 378 aaPredicted RBP16.49■□□□□ 0.23
CLDN11-209ENST00000489485 TRIM22Q8IYM9 498 aa16.49■□□□□ 0.23
CLDN11-209ENST00000489485 DNAJC5GQ8N7S2 189 aa16.49■□□□□ 0.23
CLDN11-209ENST00000489485 NSUN7Q8NE18 718 aaKnown RBP16.49■□□□□ 0.23
CLDN11-209ENST00000489485 DDX11Q96FC9 970 aa16.49■□□□□ 0.23
CLDN11-209ENST00000489485 SLC38A10Q9HBR0 1119 aa16.49■□□□□ 0.23
CLDN11-209ENST00000489485 ADAMTS5Q9UNA0 930 aa16.49■□□□□ 0.23
CLDN11-209ENST00000489485 PEX10O60683 326 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 TRPA1O75762 1119 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 FDX1P10109 184 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 SSRP1Q08945 709 aaKnown RBP16.48■□□□□ 0.23
CLDN11-209ENST00000489485 LBX2Q6XYB7 198 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 ANKRD13CQ8N6S4 541 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
CLDN11-209ENST00000489485 RANBP17Q9H2T7 1088 aaKnown RBP16.48■□□□□ 0.23
CLDN11-209ENST00000489485 SMC3Q9UQE7 1217 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 ZBTB5O15062 677 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 CA12O43570 354 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
CLDN11-209ENST00000489485 QRICH1Q2TAL8 776 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 MB21D1Q8N884 522 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 RNF26Q9BY78 433 aaPredicted RBP16.48■□□□□ 0.23
CLDN11-209ENST00000489485 RAVER2Q9HCJ3 691 aaKnown RBP16.48■□□□□ 0.23
CLDN11-209ENST00000489485 RBPJLQ9UBG7 517 aa16.48■□□□□ 0.23
CLDN11-209ENST00000489485 TLR2O60603 784 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 GJB2P29033 226 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 TMEM132BQ14DG7 1078 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 POTEEQ6S8J3 1075 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 GTF3C2Q8WUA4 911 aaPredicted RBP16.47■□□□□ 0.23
CLDN11-209ENST00000489485 BEGAINQ9BUH8 593 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 TXNRD2Q9NNW7 524 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 RNF186Q9NXI6 227 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 BTBD7Q9P203 1132 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 CPA4Q9UI42 421 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 SMCHD1A6NHR9 2005 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 A0A0G2JMZ2 1700 aa16.47■□□□□ 0.23
CLDN11-209ENST00000489485 PNMA6FA0A0J9YX94 578 aa16.46■□□□□ 0.23
CLDN11-209ENST00000489485 PRPF3O43395 683 aaKnown RBP16.46■□□□□ 0.23
CLDN11-209ENST00000489485 FMNL1O95466 1100 aaPredicted RBP16.46■□□□□ 0.23
CLDN11-209ENST00000489485 TBC1D8O95759 1140 aa16.46■□□□□ 0.23
CLDN11-209ENST00000489485 MAP2K1Q02750 393 aaPredicted RBP16.46■□□□□ 0.23
CLDN11-209ENST00000489485 USH1GQ495M9 461 aa16.46■□□□□ 0.23
CLDN11-209ENST00000489485 SMARCC2Q8TAQ2 1214 aa16.46■□□□□ 0.23
CLDN11-209ENST00000489485 MTMR8Q96EF0 704 aa16.46■□□□□ 0.23
CLDN11-209ENST00000489485 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.23
CLDN11-209ENST00000489485 ZNF536O15090 1300 aa16.46■□□□□ 0.22
CLDN11-209ENST00000489485 ICAM1P05362 532 aa16.46■□□□□ 0.22
CLDN11-209ENST00000489485 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.22
CLDN11-209ENST00000489485 FBXO11Q86XK2 927 aa16.46■□□□□ 0.22
CLDN11-209ENST00000489485 REPS2Q8NFH8 660 aa16.46■□□□□ 0.22
CLDN11-209ENST00000489485 AGBL1Q96MI9 1066 aa16.46■□□□□ 0.22
CLDN11-209ENST00000489485 RBM27Q9P2N5 1060 aaKnown RBP16.46■□□□□ 0.22
CLDN11-209ENST00000489485 ORC3Q9UBD5 711 aaPredicted RBP16.46■□□□□ 0.22
CLDN11-209ENST00000489485 ZNF214Q9UL59 606 aaPredicted RBP16.46■□□□□ 0.22
CLDN11-209ENST00000489485 CCPG1Q9ULG6 757 aa16.46■□□□□ 0.22
CLDN11-209ENST00000489485 DEXIO95424 95 aa16.45■□□□□ 0.22
CLDN11-209ENST00000489485 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
CLDN11-209ENST00000489485 STAT3P40763 770 aa16.45■□□□□ 0.22
CLDN11-209ENST00000489485 ERVK-9P63128 1117 aa16.45■□□□□ 0.22
CLDN11-209ENST00000489485 ERVK-24P63145 666 aa16.45■□□□□ 0.22
CLDN11-209ENST00000489485 HEATR3Q7Z4Q2 680 aa16.45■□□□□ 0.22
CLDN11-209ENST00000489485 GPRC5AQ8NFJ5 357 aa16.45■□□□□ 0.22
CLDN11-209ENST00000489485 AMNQ9BXJ7 453 aa16.45■□□□□ 0.22
CLDN11-209ENST00000489485 TEX13BQ9BXU2 312 aa16.45■□□□□ 0.22
CLDN11-209ENST00000489485 SPATC1LQ9H0A9 340 aa16.45■□□□□ 0.22
CLDN11-209ENST00000489485 PPP1R11O60927 126 aaPredicted RBP16.44■□□□□ 0.22
CLDN11-209ENST00000489485 CNMDO75829 334 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 TAL1P17542 331 aaPredicted RBP16.44■□□□□ 0.22
CLDN11-209ENST00000489485 OAZ1P54368 228 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 HMGN5P82970 282 aaKnown RBP16.44■□□□□ 0.22
CLDN11-209ENST00000489485 Q3C1V9 767 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 FAM184AQ8NB25 1140 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 GPKOWQ92917 476 aaPredicted RBP eCLIP16.44■□□□□ 0.22
CLDN11-209ENST00000489485 R3HDMLQ9H3Y0 253 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 HOMER2Q9NSB8 354 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 PCDHA1Q9Y5I3 950 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 ADGRA2Q96PE1 1338 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 ATP2A1O14983 1001 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 ALAS1P13196 640 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 SCG2P13521 617 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 PKN1Q16512 942 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 PFKFB3Q16875 520 aaPredicted RBP16.44■□□□□ 0.22
CLDN11-209ENST00000489485 FAM110CQ1W6H9 321 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 C17orf99Q6UX52 265 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 CCAR1Q8IX12 1150 aaKnown RBP16.44■□□□□ 0.22
CLDN11-209ENST00000489485 COA7Q96BR5 231 aa16.44■□□□□ 0.22
CLDN11-209ENST00000489485 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
CLDN11-209ENST00000489485 STK36Q9NRP7 1315 aa16.43■□□□□ 0.22
CLDN11-209ENST00000489485 MORF4L1Q9UBU8 362 aa16.43■□□□□ 0.22
CLDN11-209ENST00000489485 RIPK3Q9Y572 518 aa16.43■□□□□ 0.22
CLDN11-209ENST00000489485 ECM2O94769 699 aaPredicted RBP16.42■□□□□ 0.22
CLDN11-209ENST00000489485 BCRP11274 1271 aa16.42■□□□□ 0.22
CLDN11-209ENST00000489485 CCNA1P78396 465 aa16.42■□□□□ 0.22
CLDN11-209ENST00000489485 TRAF1Q13077 416 aa16.42■□□□□ 0.22
CLDN11-209ENST00000489485 WDR78Q5VTH9 848 aa16.42■□□□□ 0.22
CLDN11-209ENST00000489485 WWC2Q6AWC2 1192 aa16.42■□□□□ 0.22
CLDN11-209ENST00000489485 NCAPG2Q86XI2 1143 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms