RNA–Protein interactions for RNA: ENST00000489295.5

LRRFIP1-213, Transcript of LRR binding FLII interacting protein 1, human

TSL 5

Gene LRRFIP1, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-213	ENST00000489295	RIOX1	Q9H6W3	641 aa		12.54	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	AGTPBP1	Q9UPW5	1226 aa		12.54	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	SLC45A1	Q9Y2W3	748 aa		12.54	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	VPS37C	A5D8V6	355 aa	Predicted RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	MANSC4	A6NHS7	340 aa	Predicted RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	RASSF10	A6NK89	507 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	USP17L15	C9J2P7	530 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	USP17L13	C9JLJ4	530 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	TMEM232	C9JQI7	657 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	USP17L11	C9JVI0	530 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	USP17L18	D6R9N7	530 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	USP17L22	D6RA61	530 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	USP17L17	D6RBQ6	530 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	USP17L19	D6RCP7	530 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	USP17L20	D6RJB6	530 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	hCG_1984214	I3L0E3	225 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	DEXI	O95424	95 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	FDX1	P10109	184 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	HOXA7	P31268	230 aa	Predicted RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	AKAP17A	Q02040	695 aa	Known RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	SSRP1	Q08945	709 aa	Known RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	USP17L24	Q0WX57	530 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	IK	Q13123	557 aa	Predicted RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	LARP1B	Q659C4	914 aa	Known RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	NBPF11	Q86T75	865 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	FAM177A1	Q8N128	213 aa	Predicted RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	SRBD1	Q8N5C6	995 aa	Known RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	ZNF713	Q8N859	430 aa	Predicted RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	RGS22	Q8NE09	1264 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	MS4A4A	Q96JQ5	239 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	SLF1	Q9BQI6	1058 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	TANGO6	Q9C0B7	1094 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	GDPD2	Q9HCC8	539 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	ZCCHC17	Q9NP64	241 aa	Known RBP	12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295	GPCPD1	Q9NPB8	672 aa		12.53	□□□□□ -0.4
LRRFIP1-213	ENST00000489295		A0A0G2JMZ2	1700 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	TESPA1	A2RU30	521 aa	Predicted RBP	12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PRPF3	O43395	683 aa	Known RBP	12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	TRAF1	Q13077	416 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	MOGS	Q13724	837 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	SLC35G1	Q2M3R5	365 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	GADL1	Q6ZQY3	521 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	CATSPERG	Q6ZRH7	1159 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	ANKRD23	Q86SG2	305 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	MTMR8	Q96EF0	704 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	RRP36	Q96EU6	259 aa	Known RBP	12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	SLC26A6	Q9BXS9	759 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	ORC3	Q9UBD5	711 aa	Predicted RBP	12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	SEC63	Q9UGP8	760 aa	Known RBP	12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PNMA3	Q9UL41	463 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PNMA2	Q9UL42	364 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PPP1R9A	Q9ULJ8	1098 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PARP14	Q460N5	1801 aa		12.52	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	CCL15-CCL14	A0A0B4J2E2	113 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	FAM155A	B1AL88	458 aa	Predicted RBP	12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	CYTH3	O43739	400 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	JAK2	O60674	1132 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	FLOT1	O75955	427 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PTMA	P06454	111 aa	Known RBP	12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	DNM1	Q05193	864 aa	Known RBP	12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	DGKZ	Q13574	1117 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	CCL15	Q16663	113 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	TTBK2	Q6IQ55	1244 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PPP1R18	Q6NYC8	613 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	ADGRF4	Q8IZF3	695 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PRPF38A	Q8NAV1	312 aa	Known RBP	12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	RNF214	Q8ND24	703 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	BRI3BP	Q8WY22	251 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PHKB	Q93100	1093 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	UBA5	Q9GZZ9	404 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	RANBP17	Q9H2T7	1088 aa	Known RBP	12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	JMJD4	Q9H9V9	463 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PRR12	Q9ULL5	1215 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	THSD7B	Q9C0I4	1608 aa		12.51	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	ZBTB5	O15062	677 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	TPM3	P06753	285 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	SCG2	P13521	617 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	OSBP	P22059	807 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	SLC16A2	P36021	539 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	INHBE	P58166	350 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	IRX3	P78415	501 aa	Predicted RBP	12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	SREBF2	Q12772	1141 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	NOG	Q13253	232 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	CDC37	Q16543	378 aa	Predicted RBP	12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	PFKFB3	Q16875	520 aa	Predicted RBP	12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	TREML2	Q5T2D2	321 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	GPAT2	Q6NUI2	795 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	LBX2	Q6XYB7	198 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	REM2	Q8IYK8	340 aa	Predicted RBP	12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	CMTR1	Q8N1G2	835 aa	Known RBP	12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	MB21D1	Q8N884	522 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	HOXC10	Q9NYD6	342 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295		V9GY48	417 aa	Predicted RBP	12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	RLF	Q13129	1914 aa		12.5	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	MYH6	P13533	1939 aa		12.49	□□□□□ -0.41
LRRFIP1-213	ENST00000489295	MYH15	Q9Y2K3	1946 aa		12.49	□□□□□ -0.41

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