RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CLEC4GQ6UXB4 293 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 TMPRSS7Q7RTY8 843 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 C11orf96Q7Z7L8 435 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 PNISRQ8TF01 805 aaKnown RBP4.5□□□□□ -1.69
PRPF4-203ENST00000488937 SHDQ96IW2 340 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 CEP89Q96ST8 783 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 CACNA2D2Q9NY47 1150 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 TPX2Q9ULW0 747 aaKnown RBP4.5□□□□□ -1.69
PRPF4-203ENST00000488937 AKAP2Q9Y2D5 859 aa4.5□□□□□ -1.69
PRPF4-203ENST00000488937 K7ESM1 405 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 NME2P22392 152 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 PWP1Q13610 501 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 DDR2Q16832 855 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 DALRD3Q5D0E6 543 aaKnown RBP4.49□□□□□ -1.69
PRPF4-203ENST00000488937 PCNX4Q63HM2 1172 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.49□□□□□ -1.69
PRPF4-203ENST00000488937 JAMLQ86YT9 394 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 SULF2Q8IWU5 870 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 LILRA2Q8N149 483 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 SYNPOQ8N3V7 929 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 CELF2-AS1Q8N7Q2 184 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 STK35Q8TDR2 534 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 TSR2Q969E8 191 aaKnown RBP4.49□□□□□ -1.69
PRPF4-203ENST00000488937 CEP44Q9C0F1 390 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 GNL3LQ9NVN8 582 aaKnown RBP4.49□□□□□ -1.69
PRPF4-203ENST00000488937 ATP8A1Q9Y2Q0 1164 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 LAS1LQ9Y4W2 734 aaKnown RBP4.49□□□□□ -1.69
PRPF4-203ENST00000488937 COMMD10Q9Y6G5 202 aa4.49□□□□□ -1.69
PRPF4-203ENST00000488937 TEX51A0A1B0GUA7 166 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 SLC22A31A6NKX4 558 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 PDPK1O15530 556 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 TSPAN6O43657 245 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 SH3BP5O60239 455 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 GREM1O60565 184 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 BMP6P22004 513 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 GARTP22102 1010 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 CYP7A1P22680 504 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 ARNTP27540 789 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 PMLP29590 882 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 EIF4A3P38919 411 aaKnown RBP4.48□□□□□ -1.69
PRPF4-203ENST00000488937 MAGEA10P43363 369 aaPredicted RBP4.48□□□□□ -1.69
PRPF4-203ENST00000488937 EPHB1P54762 984 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 SETQ01105 290 aaPredicted RBP4.48□□□□□ -1.69
PRPF4-203ENST00000488937 VPS72Q15906 364 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 TNNI3KQ59H18 835 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 ZFYVE27Q5T4F4 411 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 SCARA3Q6AZY7 606 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 TMEM132EQ6IEE7 984 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 TPTE2Q6XPS3 522 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 SV2BQ7L1I2 683 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 ARMCX6Q7L4S7 300 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 SAMD3Q8N6K7 520 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 IL17RAQ96F46 866 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 SCYL1Q96KG9 808 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 RHOVQ96L33 236 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 TMEM74Q96NL1 305 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 FAM126AQ9BYI3 521 aaPredicted RBP4.48□□□□□ -1.69
PRPF4-203ENST00000488937 ZNF700Q9H0M5 742 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 TCEAL9Q9UHQ7 104 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 PLAAQ9Y263 795 aa4.48□□□□□ -1.69
PRPF4-203ENST00000488937 MYOCOSA0A1B0GUC4 107 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 C1QTNF3-AMACRE9PGA6 284 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 SMAD7O15105 426 aaKnown RBP4.47□□□□□ -1.69
PRPF4-203ENST00000488937 PAGE1O75459 146 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 CELA3AP09093 270 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 KIR3DL1P43629 444 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 IFRD2Q12894 506 aaPredicted RBP4.47□□□□□ -1.69
PRPF4-203ENST00000488937 HLTFQ14527 1009 aaKnown RBP eCLIP4.47□□□□□ -1.69
PRPF4-203ENST00000488937 SSPNQ14714 243 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 TCEA2Q15560 299 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 TM4SF20Q53R12 229 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 MAP1SQ66K74 1059 aaPredicted RBP4.47□□□□□ -1.69
PRPF4-203ENST00000488937 THNSL2Q86YJ6 484 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 OXR1Q8N573 874 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 ZNF507Q8TCN5 953 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 THAP3Q8WTV1 239 aaPredicted RBP4.47□□□□□ -1.69
PRPF4-203ENST00000488937 ZNF296Q8WUU4 475 aaPredicted RBP4.47□□□□□ -1.69
PRPF4-203ENST00000488937 DACT3Q96B18 629 aaPredicted RBP4.47□□□□□ -1.69
PRPF4-203ENST00000488937 GCM1Q9NP62 436 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 SAMM50Q9Y512 469 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 ST14Q9Y5Y6 855 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 CAPN6Q9Y6Q1 641 aa4.47□□□□□ -1.69
PRPF4-203ENST00000488937 IFRD1O00458 451 aaPredicted RBP4.46□□□□□ -1.7
PRPF4-203ENST00000488937 CAND2O75155 1236 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 FBXO24O75426 580 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 ALDH1L1O75891 902 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 STAT3P40763 770 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 AFF3P51826 1226 aaKnown RBP4.46□□□□□ -1.7
PRPF4-203ENST00000488937 HK2P52789 917 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 TTF1Q15361 905 aaPredicted RBP4.46□□□□□ -1.7
PRPF4-203ENST00000488937 PPM1JQ5JR12 505 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 ZBTB37Q5TC79 503 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 RASIP1Q5U651 963 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 FBXL19Q6PCT2 694 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 TMTC2Q8N394 836 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 FAM169BQ8N8A8 192 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 MFSD2AQ8NA29 543 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 PDZD8Q8NEN9 1154 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 GPBAR1Q8TDU6 330 aa4.46□□□□□ -1.7
PRPF4-203ENST00000488937 UBE2FQ969M7 185 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms