RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 DSCC1Q9BVC3 393 aa27.24■■□□□ 1.95
CUL4A-209ENST00000488558 PRR12Q9ULL5 1215 aa27.24■■□□□ 1.95
CUL4A-209ENST00000488558 SMCHD1A6NHR9 2005 aa27.23■■□□□ 1.95
CUL4A-209ENST00000488558 ZNF213O14771 459 aa27.23■■□□□ 1.95
CUL4A-209ENST00000488558 LRRC41Q15345 812 aa27.23■■□□□ 1.95
CUL4A-209ENST00000488558 BTNL9Q6UXG8 535 aa27.23■■□□□ 1.95
CUL4A-209ENST00000488558 RASGRP2Q7LDG7 609 aa27.23■■□□□ 1.95
CUL4A-209ENST00000488558 ESR2Q92731 530 aa27.23■■□□□ 1.95
CUL4A-209ENST00000488558 XPNPEP3Q9NQH7 507 aa27.23■■□□□ 1.95
CUL4A-209ENST00000488558 TAL1P17542 331 aaPredicted RBP27.22■■□□□ 1.95
CUL4A-209ENST00000488558 PDE4AP27815 886 aa27.22■■□□□ 1.95
CUL4A-209ENST00000488558 CCDC96Q2M329 555 aa27.22■■□□□ 1.95
CUL4A-209ENST00000488558 FGD4Q96M96 766 aa27.22■■□□□ 1.95
CUL4A-209ENST00000488558 RNF146Q9NTX7 359 aa27.22■■□□□ 1.95
CUL4A-209ENST00000488558 SNAI1O95863 264 aaPredicted RBP27.21■■□□□ 1.95
CUL4A-209ENST00000488558 SYN1P17600 705 aa27.21■■□□□ 1.95
CUL4A-209ENST00000488558 TTC22Q5TAA0 569 aa27.21■■□□□ 1.95
CUL4A-209ENST00000488558 AGBL1Q96MI9 1066 aa27.21■■□□□ 1.95
CUL4A-209ENST00000488558 HOMER2Q9NSB8 354 aa27.21■■□□□ 1.95
CUL4A-209ENST00000488558 NEDD4P46934 1319 aa27.2■■□□□ 1.95
CUL4A-209ENST00000488558 SNX17Q15036 470 aa27.2■■□□□ 1.94
CUL4A-209ENST00000488558 RANBP17Q9H2T7 1088 aaKnown RBP27.2■■□□□ 1.94
CUL4A-209ENST00000488558 MCM3APO60318 1980 aa27.2■■□□□ 1.94
CUL4A-209ENST00000488558 RAD50Q92878 1312 aa27.19■■□□□ 1.94
CUL4A-209ENST00000488558 LRRC37A2A6NM11 1700 aa27.19■■□□□ 1.94
CUL4A-209ENST00000488558 GSPT1P15170 499 aaKnown RBP27.19■■□□□ 1.94
CUL4A-209ENST00000488558 MAGEA10P43363 369 aaPredicted RBP27.19■■□□□ 1.94
CUL4A-209ENST00000488558 ATN1P54259 1190 aaPredicted RBP27.19■■□□□ 1.94
CUL4A-209ENST00000488558 RNF180Q86T96 592 aa27.19■■□□□ 1.94
CUL4A-209ENST00000488558 FAM133AQ8N9E0 248 aa27.19■■□□□ 1.94
CUL4A-209ENST00000488558 CHMP4CQ96CF2 233 aa27.19■■□□□ 1.94
CUL4A-209ENST00000488558 TRERF1Q96PN7 1200 aa27.19■■□□□ 1.94
CUL4A-209ENST00000488558 ABHD16BQ9H3Z7 469 aa27.19■■□□□ 1.94
CUL4A-209ENST00000488558 A1CFQ9NQ94 594 aaKnown RBP27.19■■□□□ 1.94
CUL4A-209ENST00000488558 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.19■■□□□ 1.94
CUL4A-209ENST00000488558 CTNNA3Q9UI47 895 aa27.19■■□□□ 1.94
CUL4A-209ENST00000488558 FAM184BQ9ULE4 1060 aa27.19■■□□□ 1.94
CUL4A-209ENST00000488558 PHF24Q9UPV7 400 aa27.19■■□□□ 1.94
CUL4A-209ENST00000488558 POTEB2H3BUK9 544 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 ICAM1P05362 532 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 SNHG28P0DPA3 235 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 PDHBP11177 359 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 RTP1P59025 263 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 CCDC178Q5BJE1 867 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 C1orf53Q5VUE5 145 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 CCDC174Q6PII3 467 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 SLC39A5Q6ZMH5 540 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 DGKHQ86XP1 1220 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 MTMR7Q9Y216 660 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 LTBP2Q14767 1821 aa27.18■■□□□ 1.94
CUL4A-209ENST00000488558 ALAS1P13196 640 aa27.17■■□□□ 1.94
CUL4A-209ENST00000488558 IMMTQ16891 758 aaKnown RBP27.17■■□□□ 1.94
CUL4A-209ENST00000488558 SYDE2Q5VT97 1194 aa27.17■■□□□ 1.94
CUL4A-209ENST00000488558 ZHX1Q9UKY1 873 aaPredicted RBP27.17■■□□□ 1.94
CUL4A-209ENST00000488558 PNMA2Q9UL42 364 aa27.17■■□□□ 1.94
CUL4A-209ENST00000488558 CCPG1Q9ULG6 757 aa27.17■■□□□ 1.94
CUL4A-209ENST00000488558 DNAH12Q6ZR08 3092 aa27.17■■□□□ 1.94
CUL4A-209ENST00000488558 ADAMTS4O75173 837 aa27.16■■□□□ 1.94
CUL4A-209ENST00000488558 MYCNP04198 464 aaPredicted RBP27.16■■□□□ 1.94
CUL4A-209ENST00000488558 ADCYAP1R1P41586 468 aa27.16■■□□□ 1.94
CUL4A-209ENST00000488558 IRX6P78412 446 aaPredicted RBP27.16■■□□□ 1.94
CUL4A-209ENST00000488558 ACVR2BQ13705 512 aa27.16■■□□□ 1.94
CUL4A-209ENST00000488558 TTBK2Q6IQ55 1244 aa27.16■■□□□ 1.94
CUL4A-209ENST00000488558 ARMCX2Q7L311 632 aa27.16■■□□□ 1.94
CUL4A-209ENST00000488558 IQCA1Q86XH1 822 aa27.16■■□□□ 1.94
CUL4A-209ENST00000488558 LCTP09848 1927 aa27.16■■□□□ 1.94
CUL4A-209ENST00000488558 SYNRGQ9UMZ2 1314 aa27.16■■□□□ 1.94
CUL4A-209ENST00000488558 PGK1P00558 417 aa27.15■■□□□ 1.94
CUL4A-209ENST00000488558 CNTN2Q02246 1040 aa27.15■■□□□ 1.94
CUL4A-209ENST00000488558 ZNF543Q08ER8 600 aa27.15■■□□□ 1.94
CUL4A-209ENST00000488558 TSEN34Q9BSV6 310 aaKnown RBP27.15■■□□□ 1.94
CUL4A-209ENST00000488558 FRMPD2Q68DX3 1309 aaPredicted RBP27.15■■□□□ 1.94
CUL4A-209ENST00000488558 KDM4AO75164 1064 aa27.14■■□□□ 1.94
CUL4A-209ENST00000488558 DUSP11O75319 330 aaKnown RBP27.14■■□□□ 1.94
CUL4A-209ENST00000488558 SLC16A2P36021 539 aa27.14■■□□□ 1.94
CUL4A-209ENST00000488558 SNAP25P60880 206 aa27.14■■□□□ 1.94
CUL4A-209ENST00000488558 GPATCH4Q5T3I0 446 aaKnown RBP27.14■■□□□ 1.94
CUL4A-209ENST00000488558 CCDC144CPQ8IYA2 1237 aa27.14■■□□□ 1.94
CUL4A-209ENST00000488558 ANKS1AQ92625 1134 aa27.14■■□□□ 1.94
CUL4A-209ENST00000488558 KATNBL1Q9H079 304 aa27.14■■□□□ 1.94
CUL4A-209ENST00000488558 CYP39A1Q9NYL5 469 aa27.14■■□□□ 1.94
CUL4A-209ENST00000488558 ASB14A6NK59 587 aa27.13■■□□□ 1.93
CUL4A-209ENST00000488558 MUM1L1Q5H9M0 696 aa27.13■■□□□ 1.93
CUL4A-209ENST00000488558 LENG1Q96BZ8 264 aaPredicted RBP27.13■■□□□ 1.93
CUL4A-209ENST00000488558 IL25Q9H293 177 aa27.13■■□□□ 1.93
CUL4A-209ENST00000488558 CNNM2Q9H8M5 875 aa27.13■■□□□ 1.93
CUL4A-209ENST00000488558 GPCPD1Q9NPB8 672 aa27.13■■□□□ 1.93
CUL4A-209ENST00000488558 ATP11BQ9Y2G3 1177 aa27.13■■□□□ 1.93
CUL4A-209ENST00000488558 SOWAHBA6NEL2 793 aa27.12■■□□□ 1.93
CUL4A-209ENST00000488558 CST5P28325 142 aaPredicted RBP27.12■■□□□ 1.93
CUL4A-209ENST00000488558 TDHQ8IZJ6 230 aa27.12■■□□□ 1.93
CUL4A-209ENST00000488558 KLHDC9Q8NEP7 349 aa27.12■■□□□ 1.93
CUL4A-209ENST00000488558 ZKSCAN3Q9BRR0 538 aa27.12■■□□□ 1.93
CUL4A-209ENST00000488558 KRT23Q9C075 422 aa27.12■■□□□ 1.93
CUL4A-209ENST00000488558 UBE2OQ9C0C9 1292 aaKnown RBP27.12■■□□□ 1.93
CUL4A-209ENST00000488558 PRKAG2Q9UGJ0 569 aa27.12■■□□□ 1.93
CUL4A-209ENST00000488558 WDR19Q8NEZ3 1342 aa27.12■■□□□ 1.93
CUL4A-209ENST00000488558 A0A1W2PQ45 241 aaPredicted RBP27.11■■□□□ 1.93
CUL4A-209ENST00000488558 A0A1W2PQY0 241 aa27.11■■□□□ 1.93
CUL4A-209ENST00000488558 MOXD2PA6NHM9 499 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms