RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	MB21D1	Q8N884	522 aa		11.2	□□□□□ -0.62
PTBP3-208	ENST00000487997	RAET1E	Q8TD07	263 aa		11.2	□□□□□ -0.62
PTBP3-208	ENST00000487997	UBAC1	Q9BSL1	405 aa		11.2	□□□□□ -0.62
PTBP3-208	ENST00000487997	IL17RB	Q9NRM6	502 aa		11.2	□□□□□ -0.62
PTBP3-208	ENST00000487997	RBPJL	Q9UBG7	517 aa		11.2	□□□□□ -0.62
PTBP3-208	ENST00000487997	SRRD	Q9UH36	339 aa		11.2	□□□□□ -0.62
PTBP3-208	ENST00000487997	MTMR7	Q9Y216	660 aa		11.2	□□□□□ -0.62
PTBP3-208	ENST00000487997	RBM8A	Q9Y5S9	174 aa	Known RBP	11.2	□□□□□ -0.62
PTBP3-208	ENST00000487997	TACC3	Q9Y6A5	838 aa		11.2	□□□□□ -0.62
PTBP3-208	ENST00000487997	PLXNA1	Q9UIW2	1896 aa		11.2	□□□□□ -0.62
PTBP3-208	ENST00000487997	ERICH2	A1L162	156 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	CCDC85C	A6NKD9	419 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	CYP21A2	P08686	494 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	SLC1A4	P43007	532 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	PLS1	Q14651	629 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	SLC9C1	Q4G0N8	1177 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	PRPF38A	Q8NAV1	312 aa	Known RBP	11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	NCOA7	Q8NI08	942 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	CHMP4C	Q96CF2	233 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	NUP88	Q99567	741 aa	Predicted RBP	11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	SLF1	Q9BQI6	1058 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	ZKSCAN3	Q9BRR0	538 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	TXNRD2	Q9NNW7	524 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	ZSWIM5	Q9P217	1185 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	FEM1B	Q9UK73	627 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	HPS5	Q9UPZ3	1129 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	IVNS1ABP	Q9Y6Y0	642 aa		11.19	□□□□□ -0.62
PTBP3-208	ENST00000487997	ZBED4	O75132	1171 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	MCC	P23508	829 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	CTGF	P29279	349 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	SART3	Q15020	963 aa	Known RBP	11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	CCDC96	Q2M329	555 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997		Q3C1V9	767 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	LAPTM4B	Q86VI4	370 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	DGKH	Q86XP1	1220 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	CHURC1	Q8WUH1	139 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	ATG4C	Q96DT6	458 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	GMCL1	Q96IK5	515 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	TMEM47	Q9BQJ4	181 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	LSG1	Q9H089	658 aa	Known RBP	11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	KAT14	Q9H8E8	782 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	FBXO28	Q9NVF7	368 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	PPP1R9A	Q9ULJ8	1098 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	PTCH2	Q9Y6C5	1203 aa		11.18	□□□□□ -0.62
PTBP3-208	ENST00000487997	TMEM232	C9JQI7	657 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997		E7EWF7	191 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	PEX10	O60683	326 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	REC8	O95072	547 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	FDX1	P10109	184 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	STAT2	P52630	851 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	CAP1	Q01518	475 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	PRKCZ	Q05513	592 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	IFIT1B	Q5T764	474 aa	Known RBP	11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	RCSD1	Q6JBY9	416 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	PLEKHH3	Q7Z736	793 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	FAM160B2	Q86V87	743 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	DCAF4	Q8WV16	495 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	KIFC2	Q96AC6	838 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	NUDT12	Q9BQG2	462 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	SPATC1L	Q9H0A9	340 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	BTBD7	Q9P203	1132 aa		11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	BIN2	Q9UBW5	565 aa	Predicted RBP	11.17	□□□□□ -0.62
PTBP3-208	ENST00000487997	TNKS	O95271	1327 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	VWA5A	O00534	786 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	IFIT3	O14879	490 aa	Known RBP	11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	CNMD	O75829	334 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	SLC25A27	O95847	323 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	ZKSCAN1	P17029	563 aa	Predicted RBP	11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	COPB2	P35606	906 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	NOV	P48745	357 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	SLC4A3	P48751	1232 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	FLT3LG	P49771	235 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	CREB3L3	Q68CJ9	461 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	KCTD1	Q719H9	257 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	GPR142	Q7Z601	462 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	NCAPG2	Q86XI2	1143 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	SOCS4	Q8WXH5	440 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	PORCN	Q9H237	461 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	MROH8	Q9H579	483 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	GABRQ	Q9UN88	632 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	ADAMTS5	Q9UNA0	930 aa		11.16	□□□□□ -0.62
PTBP3-208	ENST00000487997	SMCHD1	A6NHR9	2005 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	SLC27A2	O14975	620 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	STRN	O43815	780 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	ADCY3	O60266	1144 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	PLA2G6	O60733	806 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	GRK4	P32298	578 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	STAT3	P40763	770 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	IRF5	Q13568	498 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	TMEM132B	Q14DG7	1078 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	NECTIN1	Q15223	517 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	IFFO2	Q5TF58	517 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	CPXCR1	Q8N123	301 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	ENAH	Q8N8S7	591 aa	Predicted RBP	11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	PNMA1	Q8ND90	353 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	SHCBP1	Q8NEM2	672 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	ANKK1	Q8NFD2	765 aa		11.15	□□□□□ -0.62
PTBP3-208	ENST00000487997	KCNV2	Q8TDN2	545 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms