RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 AP4E1Q9UPM8 1137 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 PCDHGC5Q9Y5F6 944 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 CORINQ9Y5Q5 1042 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 PARD3Q8TEW0 1356 aa8.21□□□□□ -1.1
RTFDC1-209ENST00000487211 SMG6Q86US8 1419 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 ABCC6O95255 1503 aa8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 TMPRSS2O15393 492 aa8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 DIAPH1O60610 1272 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 SPATA31C1P0DKV0 1188 aa8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 ETFBP38117 255 aa8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 EIF6P56537 245 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 DDB1Q16531 1140 aa8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 CYFIP1Q7L576 1253 aa8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 C12orf50Q8NA57 414 aaPredicted RBP8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 MARCH10Q8NA82 808 aaPredicted RBP8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 SCARF2Q96GP6 870 aaPredicted RBP8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 PRKRIP1Q9H875 184 aaPredicted RBP8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 ZNF408Q9H9D4 720 aa8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 HIF3AQ9Y2N7 669 aa8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 SYNGAP1Q96PV0 1343 aa8.2□□□□□ -1.1
RTFDC1-209ENST00000487211 F8W735 103 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 ALX3O95076 343 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 ADH5P11766 374 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 ERVK-24P63145 666 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 PDE4BQ07343 736 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 PPM1JQ5JR12 505 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 SULT6B1Q6IMI4 303 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 FDX2Q6P4F2 183 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 SMG8Q8ND04 991 aaKnown RBP8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 PDGFDQ9GZP0 370 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 EHMT1Q9H9B1 1298 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 SUGCTQ9HAC7 445 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 CRIM1Q9NZV1 1036 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 ZNRF3Q9ULT6 936 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 TACC3Q9Y6A5 838 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 ANKRD26Q9UPS8 1709 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 IGSF1Q8N6C5 1336 aa8.19□□□□□ -1.1
RTFDC1-209ENST00000487211 ATE1O95260 518 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 HTR3BO95264 441 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 APBA3O96018 575 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 HMOX1P09601 288 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 IMPDH2P12268 514 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 DRD2P14416 443 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 PLCG1P19174 1290 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 GRK4P32298 578 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 ETF1P62495 437 aaKnown RBP8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 SOX4Q06945 474 aaPredicted RBP8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 RBL2Q08999 1139 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 PTF1AQ7RTS3 328 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 DYMQ7RTS9 669 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 TMEM130Q8N3G9 435 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 ZCRB1Q8TBF4 217 aaKnown RBP8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 RAPGEF4Q8WZA2 1011 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 SHDQ96IW2 340 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 FANCD2OSQ96PS1 177 aa8.18□□□□□ -1.1
RTFDC1-209ENST00000487211 CYP27B1O15528 508 aa8.17□□□□□ -1.1
RTFDC1-209ENST00000487211 COL8A1P27658 744 aa8.17□□□□□ -1.1
RTFDC1-209ENST00000487211 CKAP2LQ8IYA6 745 aa8.17□□□□□ -1.1
RTFDC1-209ENST00000487211 LENG1Q96BZ8 264 aaPredicted RBP8.17□□□□□ -1.1
RTFDC1-209ENST00000487211 WNT10AQ9GZT5 417 aa8.17□□□□□ -1.1
RTFDC1-209ENST00000487211 ATXN3LQ9H3M9 355 aa8.17□□□□□ -1.1
RTFDC1-209ENST00000487211 AKTIPQ9H8T0 292 aa8.17□□□□□ -1.1
RTFDC1-209ENST00000487211 DISC1Q9NRI5 854 aa8.17□□□□□ -1.1
RTFDC1-209ENST00000487211 REV1Q9UBZ9 1251 aa8.17□□□□□ -1.1
RTFDC1-209ENST00000487211 RGPD2P0DJD1 1756 aa8.17□□□□□ -1.1
RTFDC1-209ENST00000487211 C9orf172C9J069 976 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 U2SURPO15042 1029 aaKnown RBP8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 MEGF6O75095 1541 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 PGRP06401 933 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 GIPRP48546 466 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 RING1Q06587 406 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 NCAPD2Q15021 1401 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 CCDC184Q52MB2 194 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 ANKRD34AQ69YU3 496 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 CFAP53Q96M91 514 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 NACC1Q96RE7 527 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 ANTXR1Q9H6X2 564 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 THSD7AQ9UPZ6 1657 aa8.16□□□□□ -1.1
RTFDC1-209ENST00000487211 COL3A1P02461 1466 aaPredicted RBP8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 MYBBP1AQ9BQG0 1328 aaKnown RBP8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 FANCGO15287 622 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 TIAF1O95411 115 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 GLB1P16278 677 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 TTLL4Q14679 1199 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 ZBTB37Q5TC79 503 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 SOGA3Q5TF21 947 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 ANKS3Q6ZW76 656 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 DPH6Q7L8W6 267 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 LSRQ86X29 649 aaPredicted RBP8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 RNF214Q8ND24 703 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 OR6P1Q8NGX9 317 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 LNPKQ9C0E8 428 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 PIDD1Q9HB75 910 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 PRKAG3Q9UGI9 489 aa8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 R3HCC1Q9Y3T6 440 aaKnown RBP8.15□□□□□ -1.1
RTFDC1-209ENST00000487211 OVOS2A0A0G2JMS6 1433 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 ADCY9O60503 1353 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 KDRP35968 1356 aa8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 SMAD7O15105 426 aaKnown RBP8.14□□□□□ -1.11
RTFDC1-209ENST00000487211 SART1O43290 800 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms