RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 FEM1BQ9UK73 627 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 PCDHA6Q9UN73 950 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 PCDHA8Q9Y5H6 950 aa7.04□□□□□ -1.28
VAMP3-203ENST00000487194 SRPRBQ9Y5M8 271 aaKnown RBP7.04□□□□□ -1.28
VAMP3-203ENST00000487194 FAM237AA0A1B0GTK4 181 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 SYCE3A1L190 88 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 FSD2A1L4K1 749 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 IQCA1LA6NCM1 817 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 GLTPD2A6NH11 291 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 LAD1O00515 517 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 WDR46O15213 610 aaKnown RBP7.03□□□□□ -1.28
VAMP3-203ENST00000487194 LIG1P18858 919 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 ATP2B1P20020 1258 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 PTPREP23469 700 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 SLC16A2P36021 539 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 ECE1P42892 770 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 MRE11P49959 708 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 HIRAP54198 1017 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-203ENST00000487194 CDC37Q16543 378 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-203ENST00000487194 MAP3K11Q16584 847 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 QRICH1Q2TAL8 776 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 EARS2Q5JPH6 523 aaKnown RBP7.03□□□□□ -1.28
VAMP3-203ENST00000487194 AXDND1Q5T1B0 1012 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-203ENST00000487194 SULF1Q8IWU6 871 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 COA7Q96BR5 231 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 WRNIP1Q96S55 665 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 NAP1L4Q99733 375 aaKnown RBP7.03□□□□□ -1.28
VAMP3-203ENST00000487194 WDR18Q9BV38 432 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 KIAA1683Q9H0B3 1180 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 TNMDQ9H2S6 317 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 PSTPIP2Q9H939 334 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 RIC8AQ9NPQ8 531 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 FAM13BQ9NYF5 915 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 PNMA2Q9UL42 364 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 PCDHB6Q9Y5E3 794 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 PCDHA1Q9Y5I3 950 aa7.03□□□□□ -1.28
VAMP3-203ENST00000487194 PPP1R12BO60237 982 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 NR1I2O75469 434 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 FDX1P10109 184 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 MARCKSP29966 332 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 DEKP35659 375 aaKnown RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 ATP2C1P98194 919 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 AP3B2Q13367 1082 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 ZNF174Q15697 407 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 NOL9Q5SY16 702 aaKnown RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 FAM83BQ5T0W9 1011 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 RESP18Q5W5W9 173 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 ARL6IP4Q66PJ3 421 aaKnown RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 NEK8Q86SG6 692 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 PNMA8AQ86V59 439 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 FBXO11Q86XK2 927 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 FMR1NBQ8N0W7 255 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 SPICE1Q8N0Z3 855 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 ENGASEQ8NFI3 743 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 KLRG1Q96E93 195 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 CCDC34Q96HJ3 373 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 TIGD1Q96MW7 591 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 NUP88Q99567 741 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 PYM1Q9BRP8 204 aaKnown RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 TSPY26PQ9H489 355 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 FBXO2Q9UK22 296 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 PRR12Q9ULL5 1215 aa7.02□□□□□ -1.29
VAMP3-203ENST00000487194 SCAF8Q9UPN6 1271 aaKnown RBP7.02□□□□□ -1.29
VAMP3-203ENST00000487194 A0A1B0GVL5 298 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 FAM205CA6NFA0 338 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 C19orf81C9J6K1 198 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 PPP1R11O60927 126 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 FOSP01100 380 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 CCDC192P0DO97 292 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 PFKFB1P16118 471 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 PTPRAP18433 802 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 INPP5BP32019 993 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 EPHX2P34913 555 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 NF2P35240 595 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 PRPHP41219 470 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 SYKP43405 635 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 IREB2P48200 963 aaKnown RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 CLK2P49760 499 aaKnown RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 NDUFA8P51970 172 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 PTGDRQ13258 359 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 SNW1Q13573 536 aaKnown RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 ZYXQ15942 572 aaKnown RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 INF2Q27J81 1249 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 SHC4Q6S5L8 630 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 RBM43Q6ZSC3 357 aaKnown RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 ELOA2Q8IYF1 753 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 PRPF38AQ8NAV1 312 aaKnown RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 ZNF280CQ8ND82 737 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 RASGRP4Q8TDF6 673 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 TBCKQ8TEA7 893 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 KIFC2Q96AC6 838 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 SDF4Q9BRK5 362 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 RANBP17Q9H2T7 1088 aaKnown RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 GOLPH3LQ9H4A5 285 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 GRPEL1Q9HAV7 217 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 BIN2Q9UBW5 565 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 HOOK1Q9UJC3 728 aaKnown RBP7.01□□□□□ -1.29
VAMP3-203ENST00000487194 HPSEQ9Y251 543 aa7.01□□□□□ -1.29
VAMP3-203ENST00000487194 CSADQ9Y600 493 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms