RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 RASGRP2Q7LDG7 609 aa17.05■□□□□ 0.32
LIMS3-205ENST00000487150 ACAD9Q9H845 621 aa17.05■□□□□ 0.32
LIMS3-205ENST00000487150 BIN2Q9UBW5 565 aaPredicted RBP17.05■□□□□ 0.32
LIMS3-205ENST00000487150 GJD2Q9UKL4 321 aa17.05■□□□□ 0.32
LIMS3-205ENST00000487150 GABRQQ9UN88 632 aa17.05■□□□□ 0.32
LIMS3-205ENST00000487150 GTF3C3Q9Y5Q9 886 aa17.05■□□□□ 0.32
LIMS3-205ENST00000487150 PFASO15067 1338 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 PEX10O60683 326 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
LIMS3-205ENST00000487150 ADORA2AP29274 412 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 EXOSC10Q01780 885 aaKnown RBP17.04■□□□□ 0.32
LIMS3-205ENST00000487150 PPP2R5BQ15173 497 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 ADCK5Q3MIX3 580 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 DPP9Q86TI2 863 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 FBXL16Q8N461 479 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 NUP133Q8WUM0 1156 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 CHMP4CQ96CF2 233 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 UPF2Q9HAU5 1272 aaKnown RBP17.04■□□□□ 0.32
LIMS3-205ENST00000487150 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
LIMS3-205ENST00000487150 PALM3A6NDB9 673 aaPredicted RBP17.03■□□□□ 0.32
LIMS3-205ENST00000487150 CAPN2P17655 700 aa17.03■□□□□ 0.32
LIMS3-205ENST00000487150 RPS6KB1P23443 525 aa17.03■□□□□ 0.32
LIMS3-205ENST00000487150 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
LIMS3-205ENST00000487150 CCDC174Q6PII3 467 aa17.03■□□□□ 0.32
LIMS3-205ENST00000487150 USP6NLQ92738 828 aa17.03■□□□□ 0.32
LIMS3-205ENST00000487150 DDX11Q96FC9 970 aa17.03■□□□□ 0.32
LIMS3-205ENST00000487150 ZNF333Q96JL9 665 aa17.03■□□□□ 0.32
LIMS3-205ENST00000487150 RNF146Q9NTX7 359 aa17.03■□□□□ 0.32
LIMS3-205ENST00000487150 RBM28Q9NW13 759 aaKnown RBP17.03■□□□□ 0.32
LIMS3-205ENST00000487150 MAD2L2Q9UI95 211 aa17.03■□□□□ 0.32
LIMS3-205ENST00000487150 DIS3Q9Y2L1 958 aaKnown RBP17.03■□□□□ 0.32
LIMS3-205ENST00000487150 RLFQ13129 1914 aa17.02■□□□□ 0.32
LIMS3-205ENST00000487150 CCDC196A0A1B0GTZ2 297 aa17.02■□□□□ 0.32
LIMS3-205ENST00000487150 CYP2B6P20813 491 aa17.02■□□□□ 0.32
LIMS3-205ENST00000487150 CDC37Q16543 378 aaPredicted RBP17.02■□□□□ 0.32
LIMS3-205ENST00000487150 MFSD14CQ5VZR4 134 aa17.02■□□□□ 0.32
LIMS3-205ENST00000487150 OLFML2BQ68BL8 750 aa17.02■□□□□ 0.32
LIMS3-205ENST00000487150 APOA5Q6Q788 366 aa17.02■□□□□ 0.32
LIMS3-205ENST00000487150 RUFY3Q7L099 469 aa17.02■□□□□ 0.32
LIMS3-205ENST00000487150 ADGRF4Q8IZF3 695 aa17.02■□□□□ 0.32
LIMS3-205ENST00000487150 ANKRD35Q8N283 1001 aa17.02■□□□□ 0.32
LIMS3-205ENST00000487150 ZNF236Q9UL36 1845 aa17.02■□□□□ 0.31
LIMS3-205ENST00000487150 ZNF536O15090 1300 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 ZBTB43O43298 467 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 ALAS1P13196 640 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 SLC4A3P48751 1232 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 MICU3Q86XE3 530 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 MSL3Q8N5Y2 521 aaKnown RBP17.01■□□□□ 0.31
LIMS3-205ENST00000487150 TRERF1Q96PN7 1200 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 TMEM106CQ9BVX2 250 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 SPZ1Q9BXG8 430 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 UBA5Q9GZZ9 404 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 ZSWIM6Q9HCJ5 1215 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
LIMS3-205ENST00000487150 SEC63Q9UGP8 760 aaKnown RBP17.01■□□□□ 0.31
LIMS3-205ENST00000487150 PARP14Q460N5 1801 aa17■□□□□ 0.31
LIMS3-205ENST00000487150 ABCB11O95342 1321 aa17■□□□□ 0.31
LIMS3-205ENST00000487150 ZBTB5O15062 677 aa17■□□□□ 0.31
LIMS3-205ENST00000487150 INHAP05111 366 aa17■□□□□ 0.31
LIMS3-205ENST00000487150 C8orf34Q49A92 452 aa17■□□□□ 0.31
LIMS3-205ENST00000487150 SH3TC2Q8TF17 1288 aa17■□□□□ 0.31
LIMS3-205ENST00000487150 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
LIMS3-205ENST00000487150 AMNQ9BXJ7 453 aa17■□□□□ 0.31
LIMS3-205ENST00000487150 LRRC2Q9BYS8 371 aa17■□□□□ 0.31
LIMS3-205ENST00000487150 SENP2Q9HC62 589 aa17■□□□□ 0.31
LIMS3-205ENST00000487150 KLF18A0A0U1RQI7 1052 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 CCDC85CA6NKD9 419 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 ELNP15502 786 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 ANKRD1Q15327 319 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 RTN1Q16799 776 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 ZNF467Q7Z7K2 595 aaPredicted RBP16.99■□□□□ 0.31
LIMS3-205ENST00000487150 FBXO11Q86XK2 927 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 MCF2L2Q86YR7 1114 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 STAG2Q8N3U4 1231 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 FANCBQ8NB91 859 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 RRP36Q96EU6 259 aaKnown RBP16.99■□□□□ 0.31
LIMS3-205ENST00000487150 IL17RAQ96F46 866 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 MPHOSPH6Q99547 160 aaKnown RBP16.99■□□□□ 0.31
LIMS3-205ENST00000487150 AGXT2Q9BYV1 514 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 RIOX1Q9H6W3 641 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 JMJD4Q9H9V9 463 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 GPHNQ9NQX3 736 aaPredicted RBP16.99■□□□□ 0.31
LIMS3-205ENST00000487150 NRBP1Q9UHY1 535 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 MRPL11Q9Y3B7 192 aaKnown RBP16.99■□□□□ 0.31
LIMS3-205ENST00000487150 RIPK3Q9Y572 518 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 HTTP42858 3142 aa16.99■□□□□ 0.31
LIMS3-205ENST00000487150 LOC102724159A0A0B4J2E5 919 aa16.98■□□□□ 0.31
LIMS3-205ENST00000487150 GOLGA8AA7E2F4 631 aa16.98■□□□□ 0.31
LIMS3-205ENST00000487150 GOLGA8BA8MQT2 603 aa16.98■□□□□ 0.31
LIMS3-205ENST00000487150 POTEB2H3BUK9 544 aa16.98■□□□□ 0.31
LIMS3-205ENST00000487150 PWP2Q15269 919 aaKnown RBP16.98■□□□□ 0.31
LIMS3-205ENST00000487150 QRICH1Q2TAL8 776 aa16.98■□□□□ 0.31
LIMS3-205ENST00000487150 Q6ZUG5 572 aa16.98■□□□□ 0.31
LIMS3-205ENST00000487150 SAMD3Q8N6K7 520 aa16.98■□□□□ 0.31
LIMS3-205ENST00000487150 IL27Q8NEV9 243 aa16.98■□□□□ 0.31
LIMS3-205ENST00000487150 TRIB2Q92519 343 aa16.98■□□□□ 0.31
LIMS3-205ENST00000487150 BRF1Q92994 677 aa16.98■□□□□ 0.31
LIMS3-205ENST00000487150 MTMR8Q96EF0 704 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms