RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SNAP25P60880 206 aa14.84□□□□□ -0.03
HDAC6-229ENST00000486665 USP17L24Q0WX57 530 aa14.84□□□□□ -0.03
HDAC6-229ENST00000486665 LZTS2Q9BRK4 669 aa14.84□□□□□ -0.03
HDAC6-229ENST00000486665 TANGO6Q9C0B7 1094 aa14.84□□□□□ -0.03
HDAC6-229ENST00000486665 ZCCHC17Q9NP64 241 aaKnown RBP14.84□□□□□ -0.03
HDAC6-229ENST00000486665 FEM1BQ9UK73 627 aa14.84□□□□□ -0.03
HDAC6-229ENST00000486665 AGTPBP1Q9UPW5 1226 aa14.84□□□□□ -0.03
HDAC6-229ENST00000486665 COLQQ9Y215 455 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-229ENST00000486665 TRIOBPQ9H2D6 2365 aa14.84□□□□□ -0.03
HDAC6-229ENST00000486665 RANBP2P49792 3224 aaKnown RBP14.84□□□□□ -0.03
HDAC6-229ENST00000486665 PTPRFP10586 1907 aa14.84□□□□□ -0.03
HDAC6-229ENST00000486665 hCG_1642624A0A1W2PR95 340 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 PDHXO00330 501 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 PLA2G6O60733 806 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 IFNAR1P17181 557 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 HOXA7P31268 230 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-229ENST00000486665 BECN1Q14457 450 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 SYDE2Q5VT97 1194 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-229ENST00000486665 ANKRD23Q86SG2 305 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 ADGRF4Q8IZF3 695 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 NSUN7Q8NE18 718 aaKnown RBP14.83□□□□□ -0.04
HDAC6-229ENST00000486665 CHURC1Q8WUH1 139 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 PHKBQ93100 1093 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 KIFC2Q96AC6 838 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 P2RX7Q99572 595 aaKnown RBP14.83□□□□□ -0.04
HDAC6-229ENST00000486665 RIOX1Q9H6W3 641 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 JMJD4Q9H9V9 463 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 PRR12Q9ULL5 1215 aa14.83□□□□□ -0.04
HDAC6-229ENST00000486665 CPLX1O14810 134 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 DHX16O60231 1041 aaKnown RBP14.82□□□□□ -0.04
HDAC6-229ENST00000486665 FLOT1O75955 427 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 OSBPP22059 807 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 SMARCA1P28370 1054 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 DSG3P32926 999 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 PSMC4P43686 418 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 STAT2P52630 851 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 IKQ13123 557 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-229ENST00000486665 COG2Q14746 738 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 ARHGEF6Q15052 776 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 POTEEQ6S8J3 1075 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 FAM160B2Q86V87 743 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 SPRYD3Q8NCJ5 442 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 PIBF1Q8WXW3 757 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 SLF1Q9BQI6 1058 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 SPZ1Q9BXG8 430 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 SLC26A6Q9BXS9 759 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 SRRDQ9UH36 339 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 PPP1R9AQ9ULJ8 1098 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 V9GY48 417 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-229ENST00000486665 CNTNAP5Q8WYK1 1306 aa14.82□□□□□ -0.04
HDAC6-229ENST00000486665 H0YGN5 161 aa14.81□□□□□ -0.04
HDAC6-229ENST00000486665 CYP2C8P10632 490 aa14.81□□□□□ -0.04
HDAC6-229ENST00000486665 FDPSP14324 419 aaKnown RBP14.81□□□□□ -0.04
HDAC6-229ENST00000486665 KIF22Q14807 665 aa14.81□□□□□ -0.04
HDAC6-229ENST00000486665 PRPF38AQ8NAV1 312 aaKnown RBP14.81□□□□□ -0.04
HDAC6-229ENST00000486665 SMARCC2Q8TAQ2 1214 aa14.81□□□□□ -0.04
HDAC6-229ENST00000486665 ATG4CQ96DT6 458 aa14.81□□□□□ -0.04
HDAC6-229ENST00000486665 MTMR8Q96EF0 704 aa14.81□□□□□ -0.04
HDAC6-229ENST00000486665 DDX11Q96FC9 970 aa14.81□□□□□ -0.04
HDAC6-229ENST00000486665 PIGSQ96S52 555 aa14.81□□□□□ -0.04
HDAC6-229ENST00000486665 LLPHQ9BRT6 129 aaKnown RBP14.81□□□□□ -0.04
HDAC6-229ENST00000486665 ASCC2Q9H1I8 757 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-229ENST00000486665 LOC285556D6RIA3 1793 aa14.8□□□□□ -0.04
HDAC6-229ENST00000486665 PTPDC1A2A3K4 754 aa14.8□□□□□ -0.04
HDAC6-229ENST00000486665 PRPF3O43395 683 aaKnown RBP14.8□□□□□ -0.04
HDAC6-229ENST00000486665 FMNL1O95466 1100 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-229ENST00000486665 SSRP1Q08945 709 aaKnown RBP14.8□□□□□ -0.04
HDAC6-229ENST00000486665 PABPC4Q13310 644 aaKnown RBP eCLIP14.8□□□□□ -0.04
HDAC6-229ENST00000486665 CPLX2Q6PUV4 134 aaKnown RBP14.8□□□□□ -0.04
HDAC6-229ENST00000486665 HOXC10Q9NYD6 342 aa14.8□□□□□ -0.04
HDAC6-229ENST00000486665 ADAMTS5Q9UNA0 930 aa14.8□□□□□ -0.04
HDAC6-229ENST00000486665 SPDYE16A6NNV3 312 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-229ENST00000486665 PEX10O60683 326 aa14.79□□□□□ -0.04
HDAC6-229ENST00000486665 CDKL5O76039 1030 aa14.79□□□□□ -0.04
HDAC6-229ENST00000486665 BCRP11274 1271 aa14.79□□□□□ -0.04
HDAC6-229ENST00000486665 IRX3P78415 501 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-229ENST00000486665 PKN1Q16512 942 aa14.79□□□□□ -0.04
HDAC6-229ENST00000486665 HOMER1Q86YM7 354 aa14.79□□□□□ -0.04
HDAC6-229ENST00000486665 REPS2Q8NFH8 660 aa14.79□□□□□ -0.04
HDAC6-229ENST00000486665 INTS4Q96HW7 963 aaKnown RBP14.79□□□□□ -0.04
HDAC6-229ENST00000486665 RANBP17Q9H2T7 1088 aaKnown RBP14.79□□□□□ -0.04
HDAC6-229ENST00000486665 ORC3Q9UBD5 711 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-229ENST00000486665 GABRQQ9UN88 632 aa14.79□□□□□ -0.04
HDAC6-229ENST00000486665 SLC45A1Q9Y2W3 748 aa14.79□□□□□ -0.04
HDAC6-229ENST00000486665 MYPNQ86TC9 1320 aa14.78□□□□□ -0.04
HDAC6-229ENST00000486665 VWA5AO00534 786 aa14.78□□□□□ -0.04
HDAC6-229ENST00000486665 PPP1R11O60927 126 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-229ENST00000486665 GNRH1P01148 92 aa14.78□□□□□ -0.04
HDAC6-229ENST00000486665 TAL1P17542 331 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-229ENST00000486665 PRMT2P55345 433 aa14.78□□□□□ -0.04
HDAC6-229ENST00000486665 HERVK_113P62684 666 aa14.78□□□□□ -0.04
HDAC6-229ENST00000486665 PRKCZQ05513 592 aa14.78□□□□□ -0.04
HDAC6-229ENST00000486665 CDC37Q16543 378 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-229ENST00000486665 QRICH1Q2TAL8 776 aa14.78□□□□□ -0.04
HDAC6-229ENST00000486665 CCDC174Q6PII3 467 aa14.78□□□□□ -0.04
HDAC6-229ENST00000486665 RRP36Q96EU6 259 aaKnown RBP14.78□□□□□ -0.04
HDAC6-229ENST00000486665 AIFM3Q96NN9 605 aa14.78□□□□□ -0.04
HDAC6-229ENST00000486665 RNF26Q9BY78 433 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms