RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 STK11IPQ8N1F8 1099 aa19.31■□□□□ 0.68
PDE6D-205ENST00000486044 MKL1Q969V6 931 aa19.31■□□□□ 0.68
PDE6D-205ENST00000486044 MTIF3Q9H2K0 278 aaKnown RBP19.31■□□□□ 0.68
PDE6D-205ENST00000486044 TTC28Q96AY4 2481 aa19.3■□□□□ 0.68
PDE6D-205ENST00000486044 GREB1LQ9C091 1923 aaPredicted RBP19.3■□□□□ 0.68
PDE6D-205ENST00000486044 GSG1L2A8MUP6 293 aa19.3■□□□□ 0.68
PDE6D-205ENST00000486044 TNFRSF10AO00220 468 aa19.3■□□□□ 0.68
PDE6D-205ENST00000486044 RASIP1Q5U651 963 aa19.3■□□□□ 0.68
PDE6D-205ENST00000486044 C16orf59Q7L2K0 433 aa19.3■□□□□ 0.68
PDE6D-205ENST00000486044 ARMCX2Q7L311 632 aa19.3■□□□□ 0.68
PDE6D-205ENST00000486044 FAM126BQ8IXS8 530 aa19.3■□□□□ 0.68
PDE6D-205ENST00000486044 USP38Q8NB14 1042 aa19.3■□□□□ 0.68
PDE6D-205ENST00000486044 ATXN2LQ8WWM7 1075 aaKnown RBP19.3■□□□□ 0.68
PDE6D-205ENST00000486044 PBX4Q9BYU1 374 aa19.3■□□□□ 0.68
PDE6D-205ENST00000486044 MSRAQ9UJ68 235 aa19.3■□□□□ 0.68
PDE6D-205ENST00000486044 GNAT2P19087 354 aa19.29■□□□□ 0.68
PDE6D-205ENST00000486044 RAB30Q15771 203 aa19.29■□□□□ 0.68
PDE6D-205ENST00000486044 AKNAD1Q5T1N1 836 aa19.29■□□□□ 0.68
PDE6D-205ENST00000486044 ZNF365Q70YC5 407 aa19.29■□□□□ 0.68
PDE6D-205ENST00000486044 NOL8Q76FK4 1167 aaKnown RBP19.29■□□□□ 0.68
PDE6D-205ENST00000486044 CCDC144CPQ8IYA2 1237 aa19.29■□□□□ 0.68
PDE6D-205ENST00000486044 PPP1R12CQ9BZL4 782 aa19.29■□□□□ 0.68
PDE6D-205ENST00000486044 ECHDC1Q9NTX5 307 aa19.29■□□□□ 0.68
PDE6D-205ENST00000486044 IGKV6D-41A0A0C4DH26 115 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 CABYRO75952 493 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 TTLL1O95922 423 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 APPP05067 770 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 PBX2P40425 430 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 TDO2P48775 406 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 NKX3-2P78367 333 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 TNFAIP2Q03169 654 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 KBTBD3Q8NAB2 608 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 GMCL1P1Q8NEA9 526 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 PPM1EQ8WY54 764 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 APPBP2Q92624 585 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 CEP95Q96GE4 821 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 GPATCH3Q96I76 525 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 SEZ6LQ9BYH1 1024 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 MTMR4Q9NYA4 1195 aa19.28■□□□□ 0.68
PDE6D-205ENST00000486044 GRXCR1A8MXD5 290 aa19.27■□□□□ 0.68
PDE6D-205ENST00000486044 ADCY6O43306 1168 aa19.27■□□□□ 0.68
PDE6D-205ENST00000486044 ZFYP08048 801 aaPredicted RBP19.27■□□□□ 0.68
PDE6D-205ENST00000486044 ACRP10323 421 aa19.27■□□□□ 0.68
PDE6D-205ENST00000486044 BMP3P12645 472 aa19.27■□□□□ 0.68
PDE6D-205ENST00000486044 IRX5P78411 483 aaPredicted RBP19.27■□□□□ 0.68
PDE6D-205ENST00000486044 PRDM12Q9H4Q4 367 aa19.27■□□□□ 0.68
PDE6D-205ENST00000486044 ACAD9Q9H845 621 aa19.27■□□□□ 0.68
PDE6D-205ENST00000486044 IL23AQ9NPF7 189 aa19.27■□□□□ 0.68
PDE6D-205ENST00000486044 HOMER2Q9NSB8 354 aa19.27■□□□□ 0.68
PDE6D-205ENST00000486044 MYH4Q9Y623 1939 aa19.27■□□□□ 0.67
PDE6D-205ENST00000486044 MCM3APO60318 1980 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 ASB14A6NK59 587 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 ZEB2O60315 1214 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 CD4P01730 458 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 FGBP02675 491 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 LRRFIP1Q32MZ4 808 aaKnown RBP19.26■□□□□ 0.67
PDE6D-205ENST00000486044 SLFN13Q68D06 897 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 CHURC1Q8WUH1 139 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 HERVK_113Q902F9 699 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 OSBP2Q969R2 916 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 FGD4Q96M96 766 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 AP5M1Q9H0R1 490 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 THEGQ9P2T0 379 aa19.26■□□□□ 0.67
PDE6D-205ENST00000486044 ISY1Q9ULR0 285 aaKnown RBP19.26■□□□□ 0.67
PDE6D-205ENST00000486044 SPTBN5Q9NRC6 3674 aaKnown RBP19.26■□□□□ 0.67
PDE6D-205ENST00000486044 RNF113AO15541 343 aaKnown RBP19.25■□□□□ 0.67
PDE6D-205ENST00000486044 SLC3A2P08195 630 aaKnown RBP19.25■□□□□ 0.67
PDE6D-205ENST00000486044 TSPY3P0CV98 308 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 TSPY8P0CW00 308 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 CYP2C18P33260 490 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 STAT2P52630 851 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 CNTN2Q02246 1040 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 PDE4BQ07343 736 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 FAM160B2Q86V87 743 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 LRRC47Q8N1G4 583 aaKnown RBP19.25■□□□□ 0.67
PDE6D-205ENST00000486044 FAM133AQ8N9E0 248 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 ASB2Q96Q27 587 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 NACAP1Q9BZK3 213 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 KATNBL1Q9H079 304 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 HIPK3Q9H422 1215 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 SLC28A3Q9HAS3 691 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 MYO9BQ13459 2157 aa19.25■□□□□ 0.67
PDE6D-205ENST00000486044 PATL2C9JE40 543 aaKnown RBP19.24■□□□□ 0.67
PDE6D-205ENST00000486044 TMEM232C9JQI7 657 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 CTAGE5O15320 804 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 GPAA1O43292 621 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 SMARCA5O60264 1052 aaPredicted RBP19.24■□□□□ 0.67
PDE6D-205ENST00000486044 PRDM1O75626 825 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 IGFBP4P22692 258 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 MRPS5P82675 430 aaKnown RBP19.24■□□□□ 0.67
PDE6D-205ENST00000486044 BEX3Q00994 111 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 IKQ13123 557 aaPredicted RBP19.24■□□□□ 0.67
PDE6D-205ENST00000486044 ITGA7Q13683 1181 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 TKFCQ3LXA3 575 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 PPP4R3BQ5MIZ7 849 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 CXCL17Q6UXB2 119 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 SLC43A3Q8NBI5 491 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 IL27Q8NEV9 243 aa19.24■□□□□ 0.67
PDE6D-205ENST00000486044 FSCN1Q16658 493 aaKnown RBP19.23■□□□□ 0.67
PDE6D-205ENST00000486044 TLK2Q86UE8 772 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms