RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 PANK1Q8TE04 598 aa7.1□□□□□ -1.27
GCFC2-209ENST00000486016 DHRS1Q96LJ7 313 aa7.1□□□□□ -1.27
GCFC2-209ENST00000486016 METTL5Q9NRN9 209 aaKnown RBP7.1□□□□□ -1.27
GCFC2-209ENST00000486016 AP5S1Q9NUS5 200 aa7.1□□□□□ -1.27
GCFC2-209ENST00000486016 FBXL21Q9UKT6 434 aa7.1□□□□□ -1.27
GCFC2-209ENST00000486016 IMPDH2P12268 514 aa7.09□□□□□ -1.27
GCFC2-209ENST00000486016 ENDOUP21128 410 aaKnown RBP7.09□□□□□ -1.27
GCFC2-209ENST00000486016 ZNF394Q53GI3 561 aa7.09□□□□□ -1.27
GCFC2-209ENST00000486016 ZNF385BQ569K4 471 aa7.09□□□□□ -1.27
GCFC2-209ENST00000486016 DACT3Q96B18 629 aaPredicted RBP7.09□□□□□ -1.27
GCFC2-209ENST00000486016 SIGLEC10Q96LC7 697 aa7.09□□□□□ -1.27
GCFC2-209ENST00000486016 SLC12A9Q9BXP2 914 aa7.09□□□□□ -1.27
GCFC2-209ENST00000486016 SRRTQ9BXP5 876 aaKnown RBP7.09□□□□□ -1.27
GCFC2-209ENST00000486016 RTEL1Q9NZ71 1219 aa7.09□□□□□ -1.27
GCFC2-209ENST00000486016 N4BP3O15049 544 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 GSNP06396 782 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 KRTAP10-2P60368 255 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 RACK1P63244 317 aaKnown RBP7.08□□□□□ -1.28
GCFC2-209ENST00000486016 LAPTM5Q13571 262 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 CBX2Q14781 532 aaPredicted RBP7.08□□□□□ -1.28
GCFC2-209ENST00000486016 ZYXQ15942 572 aaKnown RBP7.08□□□□□ -1.28
GCFC2-209ENST00000486016 AXDND1Q5T1B0 1012 aaPredicted RBP7.08□□□□□ -1.28
GCFC2-209ENST00000486016 PRRT2Q7Z6L0 340 aaPredicted RBP7.08□□□□□ -1.28
GCFC2-209ENST00000486016 USP48Q86UV5 1035 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 TMEFF1Q8IYR6 380 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 JMJD8Q96S16 334 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 TM9SF2Q99805 663 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 CDADC1Q9BWV3 514 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 TNFRSF12AQ9NP84 129 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 SIRT5Q9NXA8 310 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 PCDHGB7Q9Y5F8 929 aa7.08□□□□□ -1.28
GCFC2-209ENST00000486016 FAM86C2PA6NEL3 165 aa7.07□□□□□ -1.28
GCFC2-209ENST00000486016 ABLIM1O14639 778 aa7.07□□□□□ -1.28
GCFC2-209ENST00000486016 CDR1P51861 262 aa7.07□□□□□ -1.28
GCFC2-209ENST00000486016 ZNF445P59923 1031 aa7.07□□□□□ -1.28
GCFC2-209ENST00000486016 TCERG1LQ5VWI1 586 aa7.07□□□□□ -1.28
GCFC2-209ENST00000486016 MARCH10Q8NA82 808 aaPredicted RBP7.07□□□□□ -1.28
GCFC2-209ENST00000486016 CXorf38Q8TB03 319 aa7.07□□□□□ -1.28
GCFC2-209ENST00000486016 TAF6LQ9Y6J9 622 aa7.07□□□□□ -1.28
GCFC2-209ENST00000486016 TRIM13O60858 407 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 PRKCAP17252 672 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 PI3P19957 117 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 MVKQ03426 396 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 DCAF15Q66K64 600 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 UNC5AQ6ZN44 842 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 RUFY4Q6ZNE9 571 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 IGDCC3Q8IVU1 814 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 CCDC144CPQ8IYA2 1237 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 MZB1Q8WU39 189 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 SMARCC1Q92922 1105 aaPredicted RBP7.06□□□□□ -1.28
GCFC2-209ENST00000486016 DDX41Q9UJV9 622 aaKnown RBP7.06□□□□□ -1.28
GCFC2-209ENST00000486016 PPT2Q9UMR5 302 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 IRAK3Q9Y616 596 aa7.06□□□□□ -1.28
GCFC2-209ENST00000486016 H0Y8X5 98 aa7.05□□□□□ -1.28
GCFC2-209ENST00000486016 MPOP05164 745 aa7.05□□□□□ -1.28
GCFC2-209ENST00000486016 CYP4F8P98187 520 aa7.05□□□□□ -1.28
GCFC2-209ENST00000486016 SKOR2Q2VWA4 1001 aaPredicted RBP7.05□□□□□ -1.28
GCFC2-209ENST00000486016 TDRD10Q5VZ19 366 aaKnown RBP7.05□□□□□ -1.28
GCFC2-209ENST00000486016 LDHDQ86WU2 507 aa7.05□□□□□ -1.28
GCFC2-209ENST00000486016 TMEM151BQ8IW70 566 aa7.05□□□□□ -1.28
GCFC2-209ENST00000486016 BCL11AQ9H165 835 aa7.05□□□□□ -1.28
GCFC2-209ENST00000486016 GP6Q9HCN6 339 aa7.05□□□□□ -1.28
GCFC2-209ENST00000486016 IMPACTQ9P2X3 320 aa7.05□□□□□ -1.28
GCFC2-209ENST00000486016 PCDHA5Q9Y5H7 936 aa7.05□□□□□ -1.28
GCFC2-209ENST00000486016 RFXAPO00287 272 aa7.04□□□□□ -1.28
GCFC2-209ENST00000486016 MSL3P1P0C860 447 aa7.04□□□□□ -1.28
GCFC2-209ENST00000486016 CD247P20963 164 aa7.04□□□□□ -1.28
GCFC2-209ENST00000486016 GUCY2CP25092 1073 aa7.04□□□□□ -1.28
GCFC2-209ENST00000486016 LSRQ86X29 649 aaPredicted RBP7.04□□□□□ -1.28
GCFC2-209ENST00000486016 NUP43Q8NFH3 380 aa7.04□□□□□ -1.28
GCFC2-209ENST00000486016 BORCS6Q96GS4 357 aa7.04□□□□□ -1.28
GCFC2-209ENST00000486016 FERD3LQ96RJ6 166 aa7.04□□□□□ -1.28
GCFC2-209ENST00000486016 ZNF214Q9UL59 606 aaPredicted RBP7.04□□□□□ -1.28
GCFC2-209ENST00000486016 ZNF451Q9Y4E5 1061 aa7.04□□□□□ -1.28
GCFC2-209ENST00000486016 FHOD1Q9Y613 1164 aa7.04□□□□□ -1.28
GCFC2-209ENST00000486016 LTBP3Q9NS15 1303 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 IRS2Q9Y4H2 1338 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 FGF10O15520 208 aaPredicted RBP7.03□□□□□ -1.28
GCFC2-209ENST00000486016 CBFA2T2O43439 604 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 GSTM1P09488 218 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 ARL4AP40617 200 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 NFKB2Q00653 900 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 RPTNQ6XPR3 784 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 METTL16Q86W50 562 aaKnown RBP7.03□□□□□ -1.28
GCFC2-209ENST00000486016 FAM129CQ86XR2 697 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 BRF1Q92994 677 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 FCRL3Q96P31 734 aaPredicted RBP7.03□□□□□ -1.28
GCFC2-209ENST00000486016 DSCC1Q9BVC3 393 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 TMPRSS5Q9H3S3 457 aa7.03□□□□□ -1.28
GCFC2-209ENST00000486016 RECKO95980 971 aa7.02□□□□□ -1.29
GCFC2-209ENST00000486016 VAMP1P23763 118 aa7.02□□□□□ -1.29
GCFC2-209ENST00000486016 IGFBP6P24592 240 aaPredicted RBP7.02□□□□□ -1.29
GCFC2-209ENST00000486016 RAB3GAP1Q15042 981 aa7.02□□□□□ -1.29
GCFC2-209ENST00000486016 TMCO4Q5TGY1 634 aa7.02□□□□□ -1.29
GCFC2-209ENST00000486016 OLFML2BQ68BL8 750 aa7.02□□□□□ -1.29
GCFC2-209ENST00000486016 TMC6Q7Z403 805 aa7.02□□□□□ -1.29
GCFC2-209ENST00000486016 RNF34Q969K3 372 aa7.02□□□□□ -1.29
GCFC2-209ENST00000486016 XYLT2Q9H1B5 865 aa7.02□□□□□ -1.29
GCFC2-209ENST00000486016 A0A087WZG4 1122 aa7.01□□□□□ -1.29
GCFC2-209ENST00000486016 NUDT19A8MXV4 375 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms