RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, human

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF25-215	ENST00000485036	LMOD1	P29536	600 aa	Predicted RBP	28.9	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	NDUFA8	P51970	172 aa		28.9	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	CDC37	Q16543	378 aa	Predicted RBP	28.9	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	QRICH1	Q2TAL8	776 aa		28.9	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	SYDE2	Q5VT97	1194 aa		28.9	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	ZNF579	Q8NAF0	562 aa	Known RBP	28.9	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	ZNF341	Q9BYN7	854 aa		28.9	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	ZNF112	Q9UJU3	913 aa		28.9	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	TMEM232	C9JQI7	657 aa		28.89	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	CLIC6	Q96NY7	704 aa		28.89	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	TSPY26P	Q9H489	355 aa		28.89	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	POLR2A	P24928	1970 aa	Known RBP	28.89	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	SSC5D	A1L4H1	1573 aa		28.89	■■■□□ 2.22
TNFRSF25-215	ENST00000485036	KIN	O60870	393 aa	Known RBP	28.89	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	PFKFB1	P16118	471 aa		28.89	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	ATP2C1	P98194	919 aa	Predicted RBP	28.89	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	REXO1	Q8N1G1	1221 aa	Known RBP	28.89	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	CTAGE5	O15320	804 aa		28.88	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	ADCY7	P51828	1080 aa		28.88	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	CAMK4	Q16566	473 aa		28.88	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	SPICE1	Q8N0Z3	855 aa		28.88	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	GLIS2	Q9BZE0	524 aa	Predicted RBP	28.88	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	RIC8A	Q9NPQ8	531 aa		28.88	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	PLA2G6	O60733	806 aa		28.87	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.87	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	STAT2	P52630	851 aa		28.86	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	ZNF174	Q15697	407 aa		28.86	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	FERMT2	Q96AC1	680 aa		28.86	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	L3MBTL3	Q96JM7	780 aa	Predicted RBP	28.86	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	NONO	Q15233	471 aa	Known RBP eCLIP	28.86	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	MRVI1	Q9Y6F6	885 aa		28.86	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	XRCC6	P12956	609 aa	Known RBP eCLIP	28.85	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	CLK2	P49760	499 aa	Known RBP	28.85	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	GRIN1	Q05586	938 aa		28.85	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	INF2	Q27J81	1249 aa		28.85	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	FAM83B	Q5T0W9	1011 aa		28.85	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	CCDC84	Q86UT8	332 aa	Predicted RBP	28.85	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	RBSN	Q9H1K0	784 aa		28.85	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	PHIP	Q8WWQ0	1821 aa		28.84	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	INPP5B	P32019	993 aa		28.84	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	IK	Q13123	557 aa	Predicted RBP	28.84	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	PTGDR	Q13258	359 aa		28.84	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	CUL5	Q93034	780 aa		28.84	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	KIAA1683	Q9H0B3	1180 aa		28.84	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	GLT8D2	Q9H1C3	349 aa		28.84	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	PRR12	Q9ULL5	1215 aa		28.84	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	PAPPA2	Q9BXP8	1791 aa		28.83	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	ZNF202	O95125	648 aa		28.83	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	SCYL3	Q8IZE3	742 aa		28.83	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	TIGD1	Q96MW7	591 aa		28.83	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	AMN	Q9BXJ7	453 aa		28.83	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	MCM7	P33993	719 aa		28.83	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	C4orf32	Q8N8J7	132 aa		28.83	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	BIN2	Q9UBW5	565 aa	Predicted RBP	28.83	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	PCDHA1	Q9Y5I3	950 aa		28.83	■■■□□ 2.21
TNFRSF25-215	ENST00000485036	SYK	P43405	635 aa		28.82	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	ARL6IP4	Q66PJ3	421 aa	Known RBP	28.82	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	DPY19L2	Q6NUT2	758 aa		28.82	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	FAM160B2	Q86V87	743 aa		28.82	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	CHURC1	Q8WUH1	139 aa		28.82	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	LPAR1	Q92633	364 aa		28.82	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	MRPL12	P52815	198 aa	Known RBP	28.81	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	ORC2	Q13416	577 aa	Predicted RBP	28.81	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	ZYX	Q15942	572 aa	Known RBP	28.81	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	PRAMEF18	Q5VWM3	479 aa		28.81	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	FBXO11	Q86XK2	927 aa		28.81	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	CKAP2L	Q8IYA6	745 aa		28.81	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	FEZ1	Q99689	392 aa		28.81	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	CSRNP2	Q9H175	543 aa		28.81	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	CCDC192	P0DO97	292 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	SUPT20HL1	Q3ZLR7	823 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	JAKMIP3	Q5VZ66	844 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	NEK8	Q86SG6	692 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	KLRG1	Q96E93	195 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	WRNIP1	Q96S55	665 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	TMEM260	Q9NX78	707 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	FEM1B	Q9UK73	627 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	SCN4A	P35499	1836 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	TBCK	Q8TEA7	893 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	WDR18	Q9BV38	432 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	RANBP17	Q9H2T7	1088 aa	Known RBP	28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	PSTPIP2	Q9H939	334 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	FAM13B	Q9NYF5	915 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	KCNH3	Q9ULD8	1083 aa		28.8	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	LAD1	O00515	517 aa		28.79	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	WDR46	O15213	610 aa	Known RBP	28.79	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	GPR162	Q16538	588 aa		28.79	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	NOL9	Q5SY16	702 aa	Known RBP	28.78	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	MYH7B	A7E2Y1	1941 aa		28.78	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	GRIN3B	O60391	1043 aa		28.77	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	TYRO3	Q06418	890 aa		28.77	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	TRAF1	Q13077	416 aa		28.77	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	SPECC1	Q5M775	1068 aa		28.77	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	DCPS	Q96C86	337 aa	Known RBP	28.77	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	PARP14	Q460N5	1801 aa		28.77	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	SNAP25	P60880	206 aa		28.77	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	UBE2S	Q16763	222 aa		28.77	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	USP50	Q70EL3	339 aa	Predicted RBP	28.77	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	TEX2	Q8IWB9	1127 aa		28.77	■■■□□ 2.2
TNFRSF25-215	ENST00000485036	SDF4	Q9BRK5	362 aa		28.77	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms