RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 TBC1D8O95759 1140 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 ACRP10323 421 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 LINC00310P59036 64 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 RAB3GAP1Q15042 981 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 DCAF15Q66K64 600 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 RUFY4Q6ZNE9 571 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 GPRASP2Q96D09 838 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 SGPP1Q9BX95 441 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 GBP3Q9H0R5 595 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 GP6Q9HCN6 339 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 CD320Q9NPF0 282 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 GINM1Q9NU53 330 aa6.93□□□□□ -1.3
SMC4-215ENST00000484799 DIS3Q9Y2L1 958 aaKnown RBP6.93□□□□□ -1.3
SMC4-215ENST00000484799 FADS2P1A8MWK0 482 aa6.92□□□□□ -1.3
SMC4-215ENST00000484799 CD247P20963 164 aa6.92□□□□□ -1.3
SMC4-215ENST00000484799 PPP2R5DQ14738 602 aa6.92□□□□□ -1.3
SMC4-215ENST00000484799 HSF5Q4G112 596 aaPredicted RBP6.92□□□□□ -1.3
SMC4-215ENST00000484799 C9orf131Q5VYM1 1079 aa6.92□□□□□ -1.3
SMC4-215ENST00000484799 HEATR6Q6AI08 1181 aaKnown RBP6.92□□□□□ -1.3
SMC4-215ENST00000484799 TMEM151BQ8IW70 566 aa6.92□□□□□ -1.3
SMC4-215ENST00000484799 FIBCD1Q8N539 461 aa6.92□□□□□ -1.3
SMC4-215ENST00000484799 OR6P1Q8NGX9 317 aa6.92□□□□□ -1.3
SMC4-215ENST00000484799 SHISA4Q96DD7 197 aa6.92□□□□□ -1.3
SMC4-215ENST00000484799 NOL6Q9H6R4 1146 aaKnown RBP6.92□□□□□ -1.3
SMC4-215ENST00000484799 IRAK3Q9Y616 596 aa6.92□□□□□ -1.3
SMC4-215ENST00000484799 MYOCOSA0A1B0GUC4 107 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 PPM1BO75688 479 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 SDHBP21912 280 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 CTSKP43235 329 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 ZNF445P59923 1031 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 AXDND1Q5T1B0 1012 aaPredicted RBP6.91□□□□□ -1.3
SMC4-215ENST00000484799 NT5DC4Q86YG4 428 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 ZDHHC15Q96MV8 337 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 SRRTQ9BXP5 876 aaKnown RBP6.91□□□□□ -1.3
SMC4-215ENST00000484799 ERVK13-1Q9NX77 482 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 DBR1Q9UK59 544 aaKnown RBP6.91□□□□□ -1.3
SMC4-215ENST00000484799 SUGT1Q9Y2Z0 365 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 KCTD3Q9Y597 815 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 FHOD1Q9Y613 1164 aa6.91□□□□□ -1.3
SMC4-215ENST00000484799 HRKO00198 91 aa6.9□□□□□ -1.3
SMC4-215ENST00000484799 RECKO95980 971 aa6.9□□□□□ -1.3
SMC4-215ENST00000484799 KRT1P04264 644 aa6.9□□□□□ -1.3
SMC4-215ENST00000484799 SLC7A5Q01650 507 aa6.9□□□□□ -1.3
SMC4-215ENST00000484799 TCERG1LQ5VWI1 586 aa6.9□□□□□ -1.3
SMC4-215ENST00000484799 CYP2R1Q6VVX0 501 aa6.9□□□□□ -1.3
SMC4-215ENST00000484799 LSRQ86X29 649 aaPredicted RBP6.9□□□□□ -1.3
SMC4-215ENST00000484799 VPS37DQ86XT2 251 aa6.9□□□□□ -1.3
SMC4-215ENST00000484799 PLCD4Q9BRC7 762 aa6.9□□□□□ -1.3
SMC4-215ENST00000484799 PHAXQ9H814 394 aaKnown RBP6.9□□□□□ -1.3
SMC4-215ENST00000484799 ZNF214Q9UL59 606 aaPredicted RBP6.9□□□□□ -1.3
SMC4-215ENST00000484799 INPP5FQ9Y2H2 1132 aa6.9□□□□□ -1.3
SMC4-215ENST00000484799 ZNF451Q9Y4E5 1061 aa6.9□□□□□ -1.3
SMC4-215ENST00000484799 A0A087WZG4 1122 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 NOTOA8MTQ0 251 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 NUDT19A8MXV4 375 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 H0Y8X5 98 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 CD3EP07766 207 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 VIPR1P32241 457 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 ZYXQ15942 572 aaKnown RBP6.89□□□□□ -1.31
SMC4-215ENST00000484799 AMIGO3Q86WK7 504 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 SIGLEC10Q96LC7 697 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 SLC12A9Q9BXP2 914 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 CCSER2Q9H7U1 834 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 IMPACTQ9P2X3 320 aa6.89□□□□□ -1.31
SMC4-215ENST00000484799 ARID1BQ8NFD5 2236 aaPredicted RBP6.88□□□□□ -1.31
SMC4-215ENST00000484799 NASPP49321 788 aaPredicted RBP6.88□□□□□ -1.31
SMC4-215ENST00000484799 ERVFRD-1P60508 538 aa6.88□□□□□ -1.31
SMC4-215ENST00000484799 NR1I3Q14994 352 aa6.88□□□□□ -1.31
SMC4-215ENST00000484799 BICRALQ6AI39 1079 aa6.88□□□□□ -1.31
SMC4-215ENST00000484799 SPOCD1Q6ZMY3 1216 aa6.88□□□□□ -1.31
SMC4-215ENST00000484799 WHRNQ9P202 907 aa6.88□□□□□ -1.31
SMC4-215ENST00000484799 ACSL6Q9UKU0 697 aa6.88□□□□□ -1.31
SMC4-215ENST00000484799 SOX9P48436 509 aa6.87□□□□□ -1.31
SMC4-215ENST00000484799 SEPHS1P49903 392 aa6.87□□□□□ -1.31
SMC4-215ENST00000484799 TRIM26Q12899 539 aaPredicted RBP6.87□□□□□ -1.31
SMC4-215ENST00000484799 TMC6Q7Z403 805 aa6.87□□□□□ -1.31
SMC4-215ENST00000484799 SLCO6A1Q86UG4 719 aa6.87□□□□□ -1.31
SMC4-215ENST00000484799 PPFIBP1Q86W92 1011 aa6.87□□□□□ -1.31
SMC4-215ENST00000484799 ADCY4Q8NFM4 1077 aa6.87□□□□□ -1.31
SMC4-215ENST00000484799 JMJD8Q96S16 334 aa6.87□□□□□ -1.31
SMC4-215ENST00000484799 ZCCHC4Q9H5U6 513 aa6.87□□□□□ -1.31
SMC4-215ENST00000484799 N4BP3O15049 544 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 NAT2P11245 290 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 BMP7P18075 431 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 GIPRP48546 466 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 HDLBPQ00341 1268 aaKnown RBP6.86□□□□□ -1.31
SMC4-215ENST00000484799 RTP2Q5QGT7 225 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 LCNL1Q6ZST4 164 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 CABP7Q86V35 215 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 C1QL4Q86Z23 238 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 PPP1R14AQ96A00 147 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 SEC16BQ96JE7 1060 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 PTCHD1Q96NR3 888 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 FCRL3Q96P31 734 aaPredicted RBP6.86□□□□□ -1.31
SMC4-215ENST00000484799 HAUS7Q99871 368 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 MBD1Q9UIS9 605 aaPredicted RBP6.86□□□□□ -1.31
SMC4-215ENST00000484799 PCDHB10Q9UN67 800 aa6.86□□□□□ -1.31
SMC4-215ENST00000484799 LTBP3Q9NS15 1303 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 SHOXO15266 292 aa6.85□□□□□ -1.31
SMC4-215ENST00000484799 PFKLP17858 780 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms