RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 CLEC3AO75596 197 aa7.4□□□□□ -1.22
COMMD3-213ENST00000483684 RPTNQ6XPR3 784 aa7.4□□□□□ -1.22
COMMD3-213ENST00000483684 ZNF512BQ96KM6 892 aaPredicted RBP7.4□□□□□ -1.22
COMMD3-213ENST00000483684 KBTBD4Q9NVX7 518 aa7.4□□□□□ -1.22
COMMD3-213ENST00000483684 ERCC3P19447 782 aa7.39□□□□□ -1.23
COMMD3-213ENST00000483684 NCKAP1LP55160 1127 aa7.39□□□□□ -1.23
COMMD3-213ENST00000483684 TAGLNQ01995 201 aaKnown RBP7.39□□□□□ -1.23
COMMD3-213ENST00000483684 SPATS1Q496A3 300 aa7.39□□□□□ -1.23
COMMD3-213ENST00000483684 TMCO4Q5TGY1 634 aa7.39□□□□□ -1.23
COMMD3-213ENST00000483684 NUP43Q8NFH3 380 aa7.39□□□□□ -1.23
COMMD3-213ENST00000483684 BORCS6Q96GS4 357 aa7.39□□□□□ -1.23
COMMD3-213ENST00000483684 VAV1P15498 845 aa7.38□□□□□ -1.23
COMMD3-213ENST00000483684 PLEKHN1Q494U1 663 aaPredicted RBP7.38□□□□□ -1.23
COMMD3-213ENST00000483684 NLRC3Q7RTR2 1065 aa7.38□□□□□ -1.23
COMMD3-213ENST00000483684 TMEM192Q8IY95 271 aa7.38□□□□□ -1.23
COMMD3-213ENST00000483684 JMJD8Q96S16 334 aa7.38□□□□□ -1.23
COMMD3-213ENST00000483684 GFOD1Q9NXC2 390 aa7.38□□□□□ -1.23
COMMD3-213ENST00000483684 PRR13Q9NZ81 148 aa7.38□□□□□ -1.23
COMMD3-213ENST00000483684 FBLN1P23142 703 aa7.37□□□□□ -1.23
COMMD3-213ENST00000483684 CRKP46108 304 aa7.37□□□□□ -1.23
COMMD3-213ENST00000483684 MAPKAPK2P49137 400 aa7.37□□□□□ -1.23
COMMD3-213ENST00000483684 ZFYVE27Q5T4F4 411 aa7.37□□□□□ -1.23
COMMD3-213ENST00000483684 CDADC1Q9BWV3 514 aa7.37□□□□□ -1.23
COMMD3-213ENST00000483684 COPRSQ9NQ92 184 aa7.37□□□□□ -1.23
COMMD3-213ENST00000483684 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
COMMD3-213ENST00000483684 IMPACTQ9P2X3 320 aa7.37□□□□□ -1.23
COMMD3-213ENST00000483684 SUPT16HQ9Y5B9 1047 aaKnown RBP7.37□□□□□ -1.23
COMMD3-213ENST00000483684 MEIS1O00470 390 aa7.36□□□□□ -1.23
COMMD3-213ENST00000483684 TNFRSF10CO14798 259 aa7.36□□□□□ -1.23
COMMD3-213ENST00000483684 PRICKLE3O43900 615 aaPredicted RBP7.36□□□□□ -1.23
COMMD3-213ENST00000483684 EIF4A3P38919 411 aaKnown RBP7.36□□□□□ -1.23
COMMD3-213ENST00000483684 SLURP1P55000 103 aa7.36□□□□□ -1.23
COMMD3-213ENST00000483684 MVKQ03426 396 aa7.36□□□□□ -1.23
COMMD3-213ENST00000483684 NR1I3Q14994 352 aa7.36□□□□□ -1.23
COMMD3-213ENST00000483684 RTP2Q5QGT7 225 aa7.36□□□□□ -1.23
COMMD3-213ENST00000483684 EAF1Q96JC9 268 aaPredicted RBP7.36□□□□□ -1.23
COMMD3-213ENST00000483684 VTI1BQ9UEU0 232 aa7.36□□□□□ -1.23
COMMD3-213ENST00000483684 PCDHB12Q9Y5F1 795 aa7.36□□□□□ -1.23
COMMD3-213ENST00000483684 NME1P15531 152 aaKnown RBP7.35□□□□□ -1.23
COMMD3-213ENST00000483684 KCNC1P48547 511 aa7.35□□□□□ -1.23
COMMD3-213ENST00000483684 PLP2Q04941 152 aa7.35□□□□□ -1.23
COMMD3-213ENST00000483684 CLCQ05315 142 aa7.35□□□□□ -1.23
COMMD3-213ENST00000483684 TRIM26Q12899 539 aaPredicted RBP7.35□□□□□ -1.23
COMMD3-213ENST00000483684 RTP5Q14D33 572 aa7.35□□□□□ -1.23
COMMD3-213ENST00000483684 ZXDCQ2QGD7 858 aaPredicted RBP7.35□□□□□ -1.23
COMMD3-213ENST00000483684 VWA3BQ502W6 1294 aa7.35□□□□□ -1.23
COMMD3-213ENST00000483684 ZC3H14Q6PJT7 736 aaKnown RBP7.35□□□□□ -1.23
COMMD3-213ENST00000483684 CRTC3Q6UUV7 619 aa7.35□□□□□ -1.23
COMMD3-213ENST00000483684 BDH2Q9BUT1 245 aa7.35□□□□□ -1.23
COMMD3-213ENST00000483684 MEIS3P2A8K0S8 358 aa7.34□□□□□ -1.23
COMMD3-213ENST00000483684 MSL3P1P0C860 447 aa7.34□□□□□ -1.23
COMMD3-213ENST00000483684 LIMS1P48059 325 aa7.34□□□□□ -1.23
COMMD3-213ENST00000483684 ZNF200P98182 395 aaPredicted RBP7.34□□□□□ -1.23
COMMD3-213ENST00000483684 AUHQ13825 339 aaKnown RBP7.34□□□□□ -1.23
COMMD3-213ENST00000483684 REXO1Q8N1G1 1221 aaKnown RBP7.34□□□□□ -1.23
COMMD3-213ENST00000483684 NLGN1Q8N2Q7 840 aa7.34□□□□□ -1.23
COMMD3-213ENST00000483684 SLC6A18Q96N87 628 aa7.34□□□□□ -1.23
COMMD3-213ENST00000483684 MKRN2Q9H000 416 aaKnown RBP7.34□□□□□ -1.23
COMMD3-213ENST00000483684 CNOT11Q9UKZ1 510 aaKnown RBP7.34□□□□□ -1.23
COMMD3-213ENST00000483684 SRGAP3O43295 1099 aa7.33□□□□□ -1.24
COMMD3-213ENST00000483684 PLA2G1BP04054 148 aaKnown RBP7.33□□□□□ -1.24
COMMD3-213ENST00000483684 PFKLP17858 780 aa7.33□□□□□ -1.24
COMMD3-213ENST00000483684 MFAP1P55081 439 aaKnown RBP7.33□□□□□ -1.24
COMMD3-213ENST00000483684 ZNF296Q8WUU4 475 aaPredicted RBP7.33□□□□□ -1.24
COMMD3-213ENST00000483684 BCL2L13Q9BXK5 485 aa7.33□□□□□ -1.24
COMMD3-213ENST00000483684 ANTXR1Q9H6X2 564 aa7.33□□□□□ -1.24
COMMD3-213ENST00000483684 MRS2Q9HD23 443 aa7.33□□□□□ -1.24
COMMD3-213ENST00000483684 FBXL21Q9UKT6 434 aa7.33□□□□□ -1.24
COMMD3-213ENST00000483684 SHOXO15266 292 aa7.32□□□□□ -1.24
COMMD3-213ENST00000483684 GSNP06396 782 aa7.32□□□□□ -1.24
COMMD3-213ENST00000483684 DBHP09172 617 aa7.32□□□□□ -1.24
COMMD3-213ENST00000483684 HTRA3P83110 453 aa7.32□□□□□ -1.24
COMMD3-213ENST00000483684 FNIP1Q8TF40 1166 aa7.32□□□□□ -1.24
COMMD3-213ENST00000483684 SLC12A9Q9BXP2 914 aa7.32□□□□□ -1.24
COMMD3-213ENST00000483684 TMPRSS5Q9H3S3 457 aa7.32□□□□□ -1.24
COMMD3-213ENST00000483684 TARBP2Q15633 366 aaKnown RBP7.31□□□□□ -1.24
COMMD3-213ENST00000483684 LRRFIP1Q32MZ4 808 aaKnown RBP7.31□□□□□ -1.24
COMMD3-213ENST00000483684 PAQR3Q6TCH7 311 aa7.31□□□□□ -1.24
COMMD3-213ENST00000483684 HHIPL2Q6UWX4 724 aa7.31□□□□□ -1.24
COMMD3-213ENST00000483684 GK5Q6ZS86 529 aa7.31□□□□□ -1.24
COMMD3-213ENST00000483684 GIPC2Q8TF65 315 aa7.31□□□□□ -1.24
COMMD3-213ENST00000483684 SLC9A7Q96T83 725 aa7.31□□□□□ -1.24
COMMD3-213ENST00000483684 SRRTQ9BXP5 876 aaKnown RBP7.31□□□□□ -1.24
COMMD3-213ENST00000483684 PLA2G2DQ9UNK4 145 aa7.31□□□□□ -1.24
COMMD3-213ENST00000483684 HCFC2Q9Y5Z7 792 aa7.31□□□□□ -1.24
COMMD3-213ENST00000483684 SH3D21A4FU49 640 aa7.3□□□□□ -1.24
COMMD3-213ENST00000483684 CYBBP04839 570 aa7.3□□□□□ -1.24
COMMD3-213ENST00000483684 FOXO4P98177 505 aa7.3□□□□□ -1.24
COMMD3-213ENST00000483684 SEZ6Q53EL9 994 aa7.3□□□□□ -1.24
COMMD3-213ENST00000483684 HLA-DQA1Q5Y7H0 255 aa7.3□□□□□ -1.24
COMMD3-213ENST00000483684 LIPIQ6XZB0 460 aa7.3□□□□□ -1.24
COMMD3-213ENST00000483684 SAPCD2Q86UD0 394 aa7.3□□□□□ -1.24
COMMD3-213ENST00000483684 UBP1Q9NZI7 540 aa7.3□□□□□ -1.24
COMMD3-213ENST00000483684 ADAMTS1Q9UHI8 967 aa7.3□□□□□ -1.24
COMMD3-213ENST00000483684 ATF2P15336 505 aa7.29□□□□□ -1.24
COMMD3-213ENST00000483684 DLX2Q07687 328 aaPredicted RBP7.29□□□□□ -1.24
COMMD3-213ENST00000483684 C7orf61Q8IZ16 206 aa7.29□□□□□ -1.24
COMMD3-213ENST00000483684 ADGRG2Q8IZP9 1017 aa7.29□□□□□ -1.24
COMMD3-213ENST00000483684 SUCOQ9UBS9 1254 aaKnown RBP7.29□□□□□ -1.24
COMMD3-213ENST00000483684 SUSD2Q9UGT4 822 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms