RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 IL25Q9H293 177 aa11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 RNF41Q9H4P4 317 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 NEDD4P46934 1319 aa11.79□□□□□ -0.52
HLA-DQA1-206ENST00000482745 PGK2P07205 417 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CAPN2P17655 700 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CCDC96Q2M329 555 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 GAS2L3Q86XJ1 694 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 DSCC1Q9BVC3 393 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 SLC38A10Q9HBR0 1119 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 RAVER2Q9HCJ3 691 aaKnown RBP11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 RIPK3Q9Y572 518 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CEP290O15078 2479 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 PCP11498 1178 aaKnown RBP11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 IMMTQ16891 758 aaKnown RBP11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 OLFML2BQ68BL8 750 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 FAM160B2Q86V87 743 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ANKLE1Q8NAG6 615 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 CHURC1Q8WUH1 139 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 TNPO1Q92973 898 aaKnown RBP11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 OGDHLQ9ULD0 1010 aa11.78□□□□□ -0.52
HLA-DQA1-206ENST00000482745 TOP1P11387 765 aaKnown RBP11.77□□□□□ -0.52
HLA-DQA1-206ENST00000482745 NASPP49321 788 aaPredicted RBP11.77□□□□□ -0.52
HLA-DQA1-206ENST00000482745 NECAB2Q7Z6G3 386 aa11.77□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ESR2Q92731 530 aa11.77□□□□□ -0.52
HLA-DQA1-206ENST00000482745 MAML3Q96JK9 1138 aa11.77□□□□□ -0.52
HLA-DQA1-206ENST00000482745 TMEM47Q9BQJ4 181 aa11.77□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ZKSCAN3Q9BRR0 538 aa11.77□□□□□ -0.52
HLA-DQA1-206ENST00000482745 HOMER2Q9NSB8 354 aa11.77□□□□□ -0.52
HLA-DQA1-206ENST00000482745 ALPK3Q96L96 1907 aa11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 RAD50Q92878 1312 aa11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ATP2A1O14983 1001 aa11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 CYBAP13498 195 aa11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 NOVP48745 357 aa11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 LHX8Q68G74 356 aa11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 RCSD1Q6JBY9 416 aa11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 SMAP1Q8IYB5 467 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 TRPV1Q8NER1 839 aa11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 TCP11L1Q9NUJ3 509 aa11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
HLA-DQA1-206ENST00000482745 CHMLP26374 656 aa11.76□□□□□ -0.53
HLA-DQA1-206ENST00000482745 RBM25P49756 843 aaKnown RBP11.76□□□□□ -0.53
HLA-DQA1-206ENST00000482745 DCAF4Q8WV16 495 aa11.76□□□□□ -0.53
HLA-DQA1-206ENST00000482745 RUFY2Q8WXA3 655 aa11.76□□□□□ -0.53
HLA-DQA1-206ENST00000482745 DDX11Q96FC9 970 aa11.76□□□□□ -0.53
HLA-DQA1-206ENST00000482745 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
HLA-DQA1-206ENST00000482745 FRMPD2Q68DX3 1309 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQA1-206ENST00000482745 B4E1Z4 1266 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 H0YGN5 161 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 KDM4AO75164 1064 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 IGHA2P01877 340 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 FDX1P10109 184 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 OAZ1P54368 228 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 SNAP25P60880 206 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 PRAMEF19Q5SWL8 479 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 CCDC174Q6PII3 467 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 C11orf49Q9H6J7 331 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 GOLGA6L22H0YM25 854 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 MSCO60682 206 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 SLC16A2P36021 539 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ZNF792Q3KQV3 632 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ANO1Q5XXA6 986 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 IQCA1Q86XH1 822 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ANKRD35Q8N283 1001 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 AGBL1Q96MI9 1066 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 GPCPD1Q9NPB8 672 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 FBXO40Q9UH90 709 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 PRR12Q9ULL5 1215 aa11.75□□□□□ -0.53
HLA-DQA1-206ENST00000482745 EVI5O60447 810 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 PLA2G6O60733 806 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 TTBK2Q6IQ55 1244 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 CHST13Q8NET6 341 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 TTC14Q96N46 770 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 TINF2Q9BSI4 451 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 DIS3Q9Y2L1 958 aaKnown RBP11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ZNF536O15090 1300 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ZNF500O60304 480 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 PDHBP11177 359 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ALAS1P13196 640 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 CLEC17AQ6ZS10 378 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ACAD9Q9H845 621 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 RNF146Q9NTX7 359 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 NR2E3Q9Y5X4 410 aa11.74□□□□□ -0.53
HLA-DQA1-206ENST00000482745 MCM3APO60318 1980 aa11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 PFASO15067 1338 aa11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 SEPT4O43236 478 aa11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 PTH1RQ03431 593 aa11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 KLHL40Q2TBA0 621 aa11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 SYDE2Q5VT97 1194 aa11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 KRT23Q9C075 422 aa11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 CNNM2Q9H8M5 875 aa11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 CCPG1Q9ULG6 757 aa11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 TNKSO95271 1327 aa11.73□□□□□ -0.53
HLA-DQA1-206ENST00000482745 DNAJC25-GNG10A0A024R161 153 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 DYNC1I1O14576 645 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 SGSM2O43147 1006 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 TAL1P17542 331 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 NT5C2P49902 561 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ZNF543Q08ER8 600 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms