RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CNTNAP5Q8WYK1 1306 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 NID2Q14112 1375 aa15.36■□□□□ 0.05
HDAC1-208ENST00000482310 CNMDO75829 334 aa15.35■□□□□ 0.05
HDAC1-208ENST00000482310 GNAQP50148 359 aa15.35■□□□□ 0.05
HDAC1-208ENST00000482310 TMEM132BQ14DG7 1078 aa15.35■□□□□ 0.05
HDAC1-208ENST00000482310 WDR78Q5VTH9 848 aa15.35■□□□□ 0.05
HDAC1-208ENST00000482310 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
HDAC1-208ENST00000482310 GTF3C6Q969F1 213 aa15.35■□□□□ 0.05
HDAC1-208ENST00000482310 SLC26A6Q9BXS9 759 aa15.35■□□□□ 0.05
HDAC1-208ENST00000482310 JMJD4Q9H9V9 463 aa15.35■□□□□ 0.05
HDAC1-208ENST00000482310 MYPNQ86TC9 1320 aa15.35■□□□□ 0.05
HDAC1-208ENST00000482310 ADGRA2Q96PE1 1338 aa15.35■□□□□ 0.05
HDAC1-208ENST00000482310 CCDC196A0A1B0GTZ2 297 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 TLR2O60603 784 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 PLA2G6O60733 806 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 FOSBP53539 338 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 RCAN1P53805 252 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 ERVK-9P63128 1117 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 ERVK-24P63145 666 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 ST3GAL1Q11201 340 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 QRICH1Q2TAL8 776 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 SNRNP48Q6IEG0 339 aaKnown RBP15.34■□□□□ 0.05
HDAC1-208ENST00000482310 HSCBQ8IWL3 235 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 RRP36Q96EU6 259 aaKnown RBP15.34■□□□□ 0.05
HDAC1-208ENST00000482310 TMX3Q96JJ7 454 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 AGBL1Q96MI9 1066 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 MCOLN1Q9GZU1 580 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 RANBP17Q9H2T7 1088 aaKnown RBP15.34■□□□□ 0.05
HDAC1-208ENST00000482310 SLC38A10Q9HBR0 1119 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 CWC22Q9HCG8 908 aaKnown RBP15.34■□□□□ 0.05
HDAC1-208ENST00000482310 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 RBPJLQ9UBG7 517 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 SEC63Q9UGP8 760 aaKnown RBP15.34■□□□□ 0.05
HDAC1-208ENST00000482310 LCTP09848 1927 aa15.34■□□□□ 0.05
HDAC1-208ENST00000482310 SLC34A2O95436 690 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 ALAS1P13196 640 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 GCLCP48506 637 aaPredicted RBP15.33■□□□□ 0.04
HDAC1-208ENST00000482310 Q3C1V9 767 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 LBX2Q6XYB7 198 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 NCAPG2Q86XI2 1143 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 CCAR1Q8IX12 1150 aaKnown RBP15.33■□□□□ 0.04
HDAC1-208ENST00000482310 REPS2Q8NFH8 660 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 GPRC5AQ8NFJ5 357 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 GPKOWQ92917 476 aaPredicted RBP eCLIP15.33■□□□□ 0.042e-12■□□□□ 9.6
HDAC1-208ENST00000482310 DDX11Q96FC9 970 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 ZSCAN31Q96LW9 406 aaPredicted RBP15.33■□□□□ 0.04
HDAC1-208ENST00000482310 LZTS2Q9BRK4 669 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 SPZ1Q9BXG8 430 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 RIOX1Q9H6W3 641 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 SH2B1Q9NRF2 756 aaPredicted RBP15.33■□□□□ 0.04
HDAC1-208ENST00000482310 CCPG1Q9ULG6 757 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 RABGAP1Q9Y3P9 1069 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 MCM3APO60318 1980 aa15.33■□□□□ 0.04
HDAC1-208ENST00000482310 JAK2O60674 1132 aa15.32■□□□□ 0.04
HDAC1-208ENST00000482310 MCM2P49736 904 aa15.32■□□□□ 0.04
HDAC1-208ENST00000482310 AKAP17AQ02040 695 aaKnown RBP15.32■□□□□ 0.04
HDAC1-208ENST00000482310 CPLX2Q6PUV4 134 aaKnown RBP15.32■□□□□ 0.04
HDAC1-208ENST00000482310 C17orf99Q6UX52 265 aa15.32■□□□□ 0.04
HDAC1-208ENST00000482310 MB21D1Q8N884 522 aa15.32■□□□□ 0.04
HDAC1-208ENST00000482310 GTF3C2Q8WUA4 911 aaPredicted RBP15.32■□□□□ 0.04
HDAC1-208ENST00000482310 SPATC1LQ9H0A9 340 aa15.32■□□□□ 0.04
HDAC1-208ENST00000482310 ZNF214Q9UL59 606 aaPredicted RBP15.32■□□□□ 0.04
HDAC1-208ENST00000482310 ADAMTS5Q9UNA0 930 aa15.32■□□□□ 0.04
HDAC1-208ENST00000482310 RIPK3Q9Y572 518 aa15.32■□□□□ 0.04
HDAC1-208ENST00000482310 V9GY48 417 aaPredicted RBP15.32■□□□□ 0.04
HDAC1-208ENST00000482310 ZNF536O15090 1300 aa15.32■□□□□ 0.04
HDAC1-208ENST00000482310 TNRC18O15417 2968 aaPredicted RBP15.31■□□□□ 0.04
HDAC1-208ENST00000482310 ZBTB5O15062 677 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 PPP1R11O60927 126 aaPredicted RBP15.31■□□□□ 0.04
HDAC1-208ENST00000482310 CTDNEP1O95476 244 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 BCRP11274 1271 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 STAT3P40763 770 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 SSRP1Q08945 709 aaKnown RBP15.31■□□□□ 0.04
HDAC1-208ENST00000482310 FUT2Q10981 343 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 NTRK3Q16288 839 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 FAM110CQ1W6H9 321 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 HEATR3Q7Z4Q2 680 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 FBXO11Q86XK2 927 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 SPRYD3Q8NCJ5 442 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 COA7Q96BR5 231 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 MOV10L1Q9BXT6 1211 aaKnown RBP15.31■□□□□ 0.04
HDAC1-208ENST00000482310 PORCNQ9H237 461 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 EFCC1Q9HA90 598 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 SAGE1Q9NXZ1 904 aa15.31■□□□□ 0.04
HDAC1-208ENST00000482310 PTPDC1A2A3K4 754 aa15.3■□□□□ 0.04
HDAC1-208ENST00000482310 K7ELQ4 463 aaPredicted RBP15.3■□□□□ 0.04
HDAC1-208ENST00000482310 GPR25O00155 361 aa15.3■□□□□ 0.04
HDAC1-208ENST00000482310 CDKL5O76039 1030 aa15.3■□□□□ 0.04
HDAC1-208ENST00000482310 ICAM1P05362 532 aa15.3■□□□□ 0.04
HDAC1-208ENST00000482310 PPP2R5BQ15173 497 aa15.3■□□□□ 0.04
HDAC1-208ENST00000482310 TRIM22Q8IYM9 498 aa15.3■□□□□ 0.04
HDAC1-208ENST00000482310 CD99L2Q8TCZ2 262 aa15.3■□□□□ 0.04
HDAC1-208ENST00000482310 TEX13BQ9BXU2 312 aa15.3■□□□□ 0.04
HDAC1-208ENST00000482310 ARHGAP39Q9C0H5 1083 aa15.3■□□□□ 0.04
HDAC1-208ENST00000482310 RNF146Q9NTX7 359 aa15.3■□□□□ 0.04
HDAC1-208ENST00000482310 PNMA6FA0A0J9YX94 578 aa15.29■□□□□ 0.04
HDAC1-208ENST00000482310 FMNL1O95466 1100 aaPredicted RBP15.29■□□□□ 0.04
HDAC1-208ENST00000482310 FDX1P10109 184 aa15.29■□□□□ 0.04
HDAC1-208ENST00000482310 IFNAR1P17181 557 aa15.29■□□□□ 0.04
HDAC1-208ENST00000482310 ERCC3P19447 782 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms