RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 SSRP1Q08945 709 aaKnown RBP24■■□□□ 1.43
VPS16-207ENST00000481812 CRHR2Q13324 411 aa24■■□□□ 1.43
VPS16-207ENST00000481812 CDC37Q16543 378 aaPredicted RBP24■■□□□ 1.43
VPS16-207ENST00000481812 TRIM22Q8IYM9 498 aa24■■□□□ 1.43
VPS16-207ENST00000481812 CCDC82Q8N4S0 544 aa24■■□□□ 1.43
VPS16-207ENST00000481812 NSUN7Q8NE18 718 aaKnown RBP24■■□□□ 1.43
VPS16-207ENST00000481812 PIGSQ96S52 555 aa24■■□□□ 1.43
VPS16-207ENST00000481812 TSHZ2Q9NRE2 1034 aa24■■□□□ 1.43
VPS16-207ENST00000481812 ZNF214Q9UL59 606 aaPredicted RBP24■■□□□ 1.43
VPS16-207ENST00000481812 STK36Q9NRP7 1315 aa24■■□□□ 1.43
VPS16-207ENST00000481812 CNMDO75829 334 aa23.99■■□□□ 1.43
VPS16-207ENST00000481812 ICAM1P05362 532 aa23.99■■□□□ 1.43
VPS16-207ENST00000481812 AKAP17AQ02040 695 aaKnown RBP23.99■■□□□ 1.43
VPS16-207ENST00000481812 TMEM132BQ14DG7 1078 aa23.99■■□□□ 1.43
VPS16-207ENST00000481812 FAM110CQ1W6H9 321 aa23.99■■□□□ 1.43
VPS16-207ENST00000481812 QRICH1Q2TAL8 776 aa23.99■■□□□ 1.43
VPS16-207ENST00000481812 SAMD1Q6SPF0 538 aaPredicted RBP23.99■■□□□ 1.43
VPS16-207ENST00000481812 C17orf99Q6UX52 265 aa23.99■■□□□ 1.43
VPS16-207ENST00000481812 SMARCC2Q8TAQ2 1214 aa23.99■■□□□ 1.43
VPS16-207ENST00000481812 BTBD7Q9P203 1132 aa23.99■■□□□ 1.43
VPS16-207ENST00000481812 SEC63Q9UGP8 760 aaKnown RBP23.99■■□□□ 1.43
VPS16-207ENST00000481812 V9GY48 417 aaPredicted RBP23.99■■□□□ 1.43
VPS16-207ENST00000481812 ZNF536O15090 1300 aa23.99■■□□□ 1.43
VPS16-207ENST00000481812 BCRP11274 1271 aa23.98■■□□□ 1.43
VPS16-207ENST00000481812 BECN1Q14457 450 aa23.98■■□□□ 1.43
VPS16-207ENST00000481812 PHKBQ93100 1093 aa23.98■■□□□ 1.43
VPS16-207ENST00000481812 INTS4Q96HW7 963 aaKnown RBP23.98■■□□□ 1.43
VPS16-207ENST00000481812 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.98■■□□□ 1.43
VPS16-207ENST00000481812 SMCHD1A6NHR9 2005 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 hCG_1984214I3L0E3 225 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 DEXIO95424 95 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 COPB2P35606 906 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 STAT3P40763 770 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 ERVK-9P63128 1117 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 ERVK-24P63145 666 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 HMGN5P82970 282 aaKnown RBP23.97■■□□□ 1.43
VPS16-207ENST00000481812 FBXO11Q86XK2 927 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 RIOX2Q8IUF8 465 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 ZNF713Q8N859 430 aaPredicted RBP23.97■■□□□ 1.43
VPS16-207ENST00000481812 JMYQ8N9B5 988 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 GPRC5AQ8NFJ5 357 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 AMNQ9BXJ7 453 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 SLC26A6Q9BXS9 759 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 TEX13BQ9BXU2 312 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 SPATC1LQ9H0A9 340 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 TXNRD2Q9NNW7 524 aa23.97■■□□□ 1.43
VPS16-207ENST00000481812 TRPA1O75762 1119 aa23.96■■□□□ 1.43
VPS16-207ENST00000481812 SLC25A27O95847 323 aa23.96■■□□□ 1.43
VPS16-207ENST00000481812 CCNA1P78396 465 aa23.96■■□□□ 1.43
VPS16-207ENST00000481812 PFKFB3Q16875 520 aaPredicted RBP23.96■■□□□ 1.43
VPS16-207ENST00000481812 TKFCQ3LXA3 575 aa23.96■■□□□ 1.43
VPS16-207ENST00000481812 NOM1Q5C9Z4 860 aaKnown RBP23.96■■□□□ 1.43
VPS16-207ENST00000481812 HOMER1Q86YM7 354 aa23.96■■□□□ 1.43
VPS16-207ENST00000481812 SHCBP1Q8NEM2 672 aa23.96■■□□□ 1.43
VPS16-207ENST00000481812 PAGR1Q9BTK6 254 aa23.96■■□□□ 1.43
VPS16-207ENST00000481812 RAVER2Q9HCJ3 691 aaKnown RBP23.96■■□□□ 1.43
VPS16-207ENST00000481812 WBP1LQ9NX94 342 aa23.96■■□□□ 1.43
VPS16-207ENST00000481812 PTPDC1A2A3K4 754 aa23.95■■□□□ 1.42
VPS16-207ENST00000481812 SNAP25P60880 206 aa23.95■■□□□ 1.42
VPS16-207ENST00000481812 PKN1Q16512 942 aa23.95■■□□□ 1.42
VPS16-207ENST00000481812 CCDC174Q6PII3 467 aa23.95■■□□□ 1.42
VPS16-207ENST00000481812 CPXCR1Q8N123 301 aa23.95■■□□□ 1.42
VPS16-207ENST00000481812 FAM177A1Q8N128 213 aaPredicted RBP23.95■■□□□ 1.42
VPS16-207ENST00000481812 ANKRD13CQ8N6S4 541 aa23.95■■□□□ 1.42
VPS16-207ENST00000481812 WASF1Q92558 559 aa23.95■■□□□ 1.42
VPS16-207ENST00000481812 BEGAINQ9BUH8 593 aa23.95■■□□□ 1.42
VPS16-207ENST00000481812 MAF1Q9H063 256 aa23.95■■□□□ 1.42
VPS16-207ENST00000481812 ORC3Q9UBD5 711 aaPredicted RBP23.95■■□□□ 1.42
VPS16-207ENST00000481812 PPP1R11O60927 126 aaPredicted RBP23.94■■□□□ 1.42
VPS16-207ENST00000481812 SCG2P13521 617 aa23.94■■□□□ 1.42
VPS16-207ENST00000481812 ANP32AP39687 249 aaKnown RBP23.94■■□□□ 1.42
VPS16-207ENST00000481812 Q3C1V9 767 aa23.94■■□□□ 1.42
VPS16-207ENST00000481812 SNRNP48Q6IEG0 339 aaKnown RBP23.94■■□□□ 1.42
VPS16-207ENST00000481812 CPA4Q9UI42 421 aa23.94■■□□□ 1.42
VPS16-207ENST00000481812 CCPG1Q9ULG6 757 aa23.94■■□□□ 1.42
VPS16-207ENST00000481812 RBM19Q9Y4C8 960 aaKnown RBP23.94■■□□□ 1.42
VPS16-207ENST00000481812 ABCB11O95342 1321 aa23.93■■□□□ 1.42
VPS16-207ENST00000481812 FDPSP14324 419 aaKnown RBP23.93■■□□□ 1.42
VPS16-207ENST00000481812 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.93■■□□□ 1.42
VPS16-207ENST00000481812 PIBF1Q8WXW3 757 aa23.93■■□□□ 1.42
VPS16-207ENST00000481812 AGBL1Q96MI9 1066 aa23.93■■□□□ 1.42
VPS16-207ENST00000481812 MOV10L1Q9BXT6 1211 aaKnown RBP23.93■■□□□ 1.42
VPS16-207ENST00000481812 CEP350Q5VT06 3117 aa23.93■■□□□ 1.42
VPS16-207ENST00000481812 hCG_1642624A0A1W2PR95 340 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 JAK2O60674 1132 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 TBC1D8O95759 1140 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 PLS1Q14651 629 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 PPP1R18Q6NYC8 613 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 TEX2Q8IWB9 1127 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 CHST13Q8NET6 341 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 R3HDMLQ9H3Y0 253 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 MROH8Q9H579 483 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 SH3GLB2Q9NR46 395 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 BARHL2Q9NY43 387 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 FBXO40Q9UH90 709 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 MRPL11Q9Y3B7 192 aaKnown RBP23.92■■□□□ 1.42
VPS16-207ENST00000481812 KIF3AQ9Y496 699 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 PCDHA1Q9Y5I3 950 aa23.92■■□□□ 1.42
VPS16-207ENST00000481812 SMC3Q9UQE7 1217 aa23.91■■□□□ 1.42
VPS16-207ENST00000481812 WWC2Q6AWC2 1192 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms