RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 MPP2Q14168 576 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 TMEM201Q5SNT2 666 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 SNAP47Q5SQN1 464 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 UBXN11Q5T124 520 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 ZFYVE27Q5T4F4 411 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 DIEXFQ68CQ4 756 aaKnown RBP3.75□□□□□ -1.81
USH2A-204ENST00000481786 FBXL19Q6PCT2 694 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 FAM196AQ6ZSG2 479 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 HS2ST1Q7LGA3 356 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 ZFPM1Q8IX07 1006 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 Q8N1X5 172 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 ANKS4BQ8N8V4 417 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 FBXO27Q8NI29 283 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 PLCD4Q9BRC7 762 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 MRIQ9BWK5 157 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 BACH2Q9BYV9 841 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 BCL11AQ9H165 835 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 GGT7Q9UJ14 662 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 PALD1Q9ULE6 856 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 ZNF281Q9Y2X9 895 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 POLR3KQ9Y2Y1 108 aaPredicted RBP3.75□□□□□ -1.81
USH2A-204ENST00000481786 PRG4Q92954 1404 aaPredicted RBP3.75□□□□□ -1.81
USH2A-204ENST00000481786 UPK3BL1B0FP48 263 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 UPK3BL2E5RIL1 263 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 HRKO00198 91 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 LIMS1P48059 325 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 PRDM2Q13029 1718 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 REC114Q7Z4M0 266 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 TMEM87AQ8NBN3 555 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 ZNF296Q8WUU4 475 aaPredicted RBP3.74□□□□□ -1.81
USH2A-204ENST00000481786 LRRC3Q9BY71 257 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 KLHL14Q9P2G3 628 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 REV1Q9UBZ9 1251 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 ADAMTS1Q9UHI8 967 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 CEP131Q9UPN4 1083 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 PCDHA5Q9Y5H7 936 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 ROBO2Q9HCK4 1378 aa3.74□□□□□ -1.81
USH2A-204ENST00000481786 TEX14Q8IWB6 1497 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 GLI2P10070 1586 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 TLR3O15455 904 aaKnown RBP3.73□□□□□ -1.81
USH2A-204ENST00000481786 BUB1BO60566 1050 aaPredicted RBP3.73□□□□□ -1.81
USH2A-204ENST00000481786 HTR3BO95264 441 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 TGM1P22735 817 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 RPL10P27635 214 aaKnown RBP3.73□□□□□ -1.81
USH2A-204ENST00000481786 ETV3P41162 512 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 CRKP46108 304 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 FANCCQ00597 558 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 DUSP4Q13115 394 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 CRB2Q5IJ48 1285 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 NT5DC1Q5TFE4 455 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 ZPBP2Q6X784 338 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 TMC6Q7Z403 805 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 LSRQ86X29 649 aaPredicted RBP3.73□□□□□ -1.81
USH2A-204ENST00000481786 SLFN12Q8IYM2 578 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 FAM13CQ8NE31 585 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 DDX1Q92499 740 aaKnown RBP3.73□□□□□ -1.81
USH2A-204ENST00000481786 SPATA25Q9BR10 227 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 SMPD4Q9NXE4 827 aa3.73□□□□□ -1.81
USH2A-204ENST00000481786 SUPT16HQ9Y5B9 1047 aaKnown RBP3.73□□□□□ -1.81
USH2A-204ENST00000481786 TOP2AP11388 1531 aaKnown RBP3.72□□□□□ -1.81
USH2A-204ENST00000481786 CHURC1-FNTBB4DL54 471 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 NRDCO43847 1150 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 DNAJA2O60884 412 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 C6P13671 934 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 VAMP1P23763 118 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 ZNF76P36508 570 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 YARSP54577 528 aaKnown RBP3.72□□□□□ -1.81
USH2A-204ENST00000481786 CWF19L2Q2TBE0 894 aaKnown RBP3.72□□□□□ -1.81
USH2A-204ENST00000481786 CEP128Q6ZU80 1094 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 CYB5D2Q8WUJ1 264 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 SYTL4Q96C24 671 aaPredicted RBP3.72□□□□□ -1.81
USH2A-204ENST00000481786 BRMS1Q9HCU9 246 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 CRTAC1Q9NQ79 661 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 METTL5Q9NRN9 209 aaKnown RBP3.72□□□□□ -1.81
USH2A-204ENST00000481786 UBP1Q9NZI7 540 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 PLA2G2DQ9UNK4 145 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 TSPOAP1O95153 1857 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 ADCY10Q96PN6 1610 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 PLB1Q6P1J6 1458 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 FGD5Q6ZNL6 1462 aa3.72□□□□□ -1.81
USH2A-204ENST00000481786 ATE1O95260 518 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 RECKO95980 971 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 FBLN1P23142 703 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 HSPA2P54652 639 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 VWA3BQ502W6 1294 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 RGS22Q8NE09 1264 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 HHIPL1Q96JK4 782 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 RBM15Q96T37 977 aaKnown RBP eCLIP3.71□□□□□ -1.82
USH2A-204ENST00000481786 NT5C1AQ9BXI3 368 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 PRDM14Q9GZV8 571 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 EHMT1Q9H9B1 1298 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 KLHL3Q9UH77 587 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 ZMYM5Q9UJ78 669 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 PCDHB14Q9Y5E9 798 aa3.71□□□□□ -1.82
USH2A-204ENST00000481786 TMEM82A0PJX8 343 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 NUDT19A8MXV4 375 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 PLA2G1BP04054 148 aaKnown RBP3.7□□□□□ -1.82
USH2A-204ENST00000481786 ITGB3P05106 788 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 PNLIPP16233 465 aa3.7□□□□□ -1.82
USH2A-204ENST00000481786 ZNF20P17024 532 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms