RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 FOXN1O15353 648 aa14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 STAT3P40763 770 aa14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 MCM2P49736 904 aa14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 SNAP25P60880 206 aa14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 CCT2P78371 535 aaKnown RBP14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 SP3Q02447 781 aa14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 NOL8Q76FK4 1167 aaKnown RBP14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 RIOX2Q8IUF8 465 aa14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 CMTR1Q8N1G2 835 aaKnown RBP14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 NCOA5Q9HCD5 579 aaKnown RBP14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 TSKSQ9UJT2 592 aa14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 CTDP1Q9Y5B0 961 aaPredicted RBP14.37□□□□□ -0.11
SHROOM3-205ENST00000481002 FKTNO75072 461 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 CD2BP2O95400 341 aaKnown RBP14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 LARGE1O95461 756 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 SLC25A27O95847 323 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 ICAM1P05362 532 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 IFNAR1P17181 557 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 CCNA1P78396 465 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 SCRN1Q12765 414 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 STK3Q13188 491 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 CPXCR1Q8N123 301 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 SHCBP1Q8NEM2 672 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 MOV10L1Q9BXT6 1211 aaKnown RBP14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 TEX13BQ9BXU2 312 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 RAVER2Q9HCJ3 691 aaKnown RBP14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 PNMA2Q9UL42 364 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 CNTNAP5Q8WYK1 1306 aa14.36□□□□□ -0.11
SHROOM3-205ENST00000481002 PNMA6FA0A0J9YX94 578 aa14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 ZBTB5O15062 677 aa14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 DHX16O60231 1041 aaKnown RBP14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 HSPA8P11142 646 aaKnown RBP14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 COPB2P35606 906 aa14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 CTCFP49711 727 aaPredicted RBP14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 LACTBP83111 547 aaPredicted RBP14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 PLS1Q14651 629 aa14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 CDC37Q16543 378 aaPredicted RBP14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 QRICH1Q2TAL8 776 aa14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 CCDC82Q8N4S0 544 aa14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 ZNF296Q8WUU4 475 aaPredicted RBP14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 GTF3C6Q969F1 213 aa14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 RRP36Q96EU6 259 aaKnown RBP14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 AGBL1Q96MI9 1066 aa14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 PIGSQ96S52 555 aa14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 PORCNQ9H237 461 aa14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 SH2B1Q9NRF2 756 aaPredicted RBP14.35□□□□□ -0.11
SHROOM3-205ENST00000481002 ZSWIM8A7E2V4 1837 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 CPLX1O14810 134 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 MAPK4P31152 587 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 TKFCQ3LXA3 575 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 SNRNP48Q6IEG0 339 aaKnown RBP14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 CCDC174Q6PII3 467 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 CPLX2Q6PUV4 134 aaKnown RBP14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 FBXO11Q86XK2 927 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 NECAB1Q8N987 351 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 MROH8Q9H579 483 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 CCPG1Q9ULG6 757 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 RIPK3Q9Y572 518 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 V9GY48 417 aaPredicted RBP14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 PLXNB2O15031 1838 aa14.34□□□□□ -0.11
SHROOM3-205ENST00000481002 PRPF3O43395 683 aaKnown RBP14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 PPP1R11O60927 126 aaPredicted RBP14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 ERCC3P19447 782 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 CTGFP29279 349 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 ST3GAL1Q11201 340 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 TRAF1Q13077 416 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 KIF22Q14807 665 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 HOMER1Q86YM7 354 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 CHST13Q8NET6 341 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 SNX21Q969T3 373 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 ERO1AQ96HE7 468 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 TMX3Q96JJ7 454 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 AMNQ9BXJ7 453 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 RNF26Q9BY78 433 aaPredicted RBP14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 EFCC1Q9HA90 598 aa14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 RBM27Q9P2N5 1060 aaKnown RBP14.33□□□□□ -0.12
SHROOM3-205ENST00000481002 STRNO43815 780 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 FMNL1O95466 1100 aaPredicted RBP14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 CTDNEP1O95476 244 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 PSMC4P43686 418 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 LBX1P52954 281 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 CAP1Q01518 475 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 NCAPG2Q86XI2 1143 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 CCAR1Q8IX12 1150 aaKnown RBP14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 CD99L2Q8TCZ2 262 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 PIBF1Q8WXW3 757 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 PHKBQ93100 1093 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 TRERF1Q96PN7 1200 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 SEC63Q9UGP8 760 aaKnown RBP14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 FBXO40Q9UH90 709 aa14.32□□□□□ -0.12
SHROOM3-205ENST00000481002 hCG_1642624A0A1W2PR95 340 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 CDKL5O76039 1030 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 ALAS1P13196 640 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 SLC4A3P48751 1232 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 FCGRTP55899 365 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 SSRP1Q08945 709 aaKnown RBP14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 PKN1Q16512 942 aa14.31□□□□□ -0.12
SHROOM3-205ENST00000481002 GPR142Q7Z601 462 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms