RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 PANK1Q8TE04 598 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 VCPKMTQ9H867 229 aa12.43□□□□□ -0.42
SMURF1-204ENST00000480055 POTEMA6NI47 508 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 WDR46O15213 610 aaKnown RBP12.42□□□□□ -0.42
SMURF1-204ENST00000480055 PRKAB2O43741 272 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 PQBP1O60828 265 aaKnown RBP12.42□□□□□ -0.42
SMURF1-204ENST00000480055 ADAMTS4O75173 837 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 PGK1P00558 417 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 PGK2P07205 417 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 TMEM132BQ14DG7 1078 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 TOX2Q96NM4 488 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMURF1-204ENST00000480055 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 ATP8A2Q9NTI2 1148 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 TMX2Q9Y320 296 aa12.42□□□□□ -0.42
SMURF1-204ENST00000480055 CYP2D7A0A087X1C5 515 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 TCRBV5S4A2TA0A5A2 114 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 HMMRO75330 724 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 ZNF865P0CJ78 1059 aaPredicted RBP12.41□□□□□ -0.42
SMURF1-204ENST00000480055 EEF2P13639 858 aaKnown RBP12.41□□□□□ -0.42
SMURF1-204ENST00000480055 AKR1A1P14550 325 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 CDK8P49336 464 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 FAAP100Q0VG06 881 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMURF1-204ENST00000480055 TIFAQ96CG3 184 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 CCDC17Q96LX7 622 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 TINF2Q9BSI4 451 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 TSEN34Q9BSV6 310 aaKnown RBP12.41□□□□□ -0.42
SMURF1-204ENST00000480055 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 TMEM39AQ9NV64 488 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 PAG1Q9NWQ8 432 aa12.41□□□□□ -0.42
SMURF1-204ENST00000480055 DIS3Q9Y2L1 958 aaKnown RBP12.41□□□□□ -0.42
SMURF1-204ENST00000480055 SYNRGQ9UMZ2 1314 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 USP17L21D6R901 530 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 MAP3K7O43318 606 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 MS4A1P11836 297 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 TAL1P17542 331 aaPredicted RBP12.4□□□□□ -0.42
SMURF1-204ENST00000480055 STAT3P40763 770 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 ZNF792Q3KQV3 632 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 SLFNL1Q499Z3 407 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 RIOX2Q8IUF8 465 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 SIAH1Q8IUQ4 282 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 LENG1Q96BZ8 264 aaPredicted RBP12.4□□□□□ -0.42
SMURF1-204ENST00000480055 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.4□□□□□ -0.427e-8■■□□□ 14.2
SMURF1-204ENST00000480055 KANSL2Q9H9L4 492 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 TBX21Q9UL17 535 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 ADAMTS5Q9UNA0 930 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 CNPY2Q9Y2B0 182 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 CTDP1Q9Y5B0 961 aaPredicted RBP12.4□□□□□ -0.42
SMURF1-204ENST00000480055 SLC4A4Q9Y6R1 1079 aa12.4□□□□□ -0.42
SMURF1-204ENST00000480055 REV3LO60673 3130 aa12.4□□□□□ -0.43
SMURF1-204ENST00000480055 MOXD2PA6NHM9 499 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 DCDC2CA8MYV0 355 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 TIMP1P01033 207 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 ADD2P35612 726 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 ACLYP53396 1101 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 AKNAD1Q5T1N1 836 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 C12orf60Q5U649 245 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 RASIP1Q5U651 963 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 RPAP2Q8IXW5 612 aaPredicted RBP12.39□□□□□ -0.43
SMURF1-204ENST00000480055 STK11IPQ8N1F8 1099 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 ZNF687Q8N1G0 1237 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 ATXN2LQ8WWM7 1075 aaKnown RBP12.39□□□□□ -0.43
SMURF1-204ENST00000480055 GAS2L1Q99501 681 aaPredicted RBP12.39□□□□□ -0.43
SMURF1-204ENST00000480055 STARD7Q9NQZ5 370 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 FBXO28Q9NVF7 368 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 CHD7Q9P2D1 2997 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 THEGQ9P2T0 379 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 LCTP09848 1927 aa12.39□□□□□ -0.43
SMURF1-204ENST00000480055 MROH7Q68CQ1 1323 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 SMIM22K7EJ46 135 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 VWA5AO00534 786 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 COPB2P35606 906 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 FAM83BQ5T0W9 1011 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 CCSAPQ6IQ19 270 aaPredicted RBP12.38□□□□□ -0.43
SMURF1-204ENST00000480055 MFSD5Q6N075 450 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 ZSCAN25Q6NSZ9 544 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 C16orf86Q6ZW13 317 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 KLHDC9Q8NEP7 349 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 NUP133Q8WUM0 1156 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 DDX11Q96FC9 970 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 PBX4Q9BYU1 374 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 ADAM33Q9BZ11 813 aa12.38□□□□□ -0.43
SMURF1-204ENST00000480055 ZNF214Q9UL59 606 aaPredicted RBP12.38□□□□□ -0.43
SMURF1-204ENST00000480055 SYNGAP1Q96PV0 1343 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 SCN5AQ14524 2016 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 TRANK1O15050 2925 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 ATP5JP18859 108 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 CST5P28325 142 aaPredicted RBP12.37□□□□□ -0.43
SMURF1-204ENST00000480055 PBX2P40425 430 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 PPIGQ13427 754 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMURF1-204ENST00000480055 TMEM240Q5SV17 173 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 CTR9Q6PD62 1173 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 CCDC174Q6PII3 467 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms