RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.45■□□□□ 0.22
CLDN18-203ENST00000479660 TMEM232C9JQI7 657 aa16.45■□□□□ 0.22
CLDN18-203ENST00000479660 ASNSP08243 561 aa16.45■□□□□ 0.22
CLDN18-203ENST00000479660 IKQ13123 557 aaPredicted RBP16.45■□□□□ 0.22
CLDN18-203ENST00000479660 PPP1R18Q6NYC8 613 aa16.45■□□□□ 0.22
CLDN18-203ENST00000479660 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
CLDN18-203ENST00000479660 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
CLDN18-203ENST00000479660 GPRC5DQ9NZD1 345 aa16.45■□□□□ 0.22
CLDN18-203ENST00000479660 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.45■□□□□ 0.22
CLDN18-203ENST00000479660 ADCY7P51828 1080 aa16.45■□□□□ 0.22
CLDN18-203ENST00000479660 BIN2Q9UBW5 565 aaPredicted RBP16.45■□□□□ 0.22
CLDN18-203ENST00000479660 PHF20L1A8MW92 1017 aa16.44■□□□□ 0.22
CLDN18-203ENST00000479660 NONOQ15233 471 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLDN18-203ENST00000479660 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
CLDN18-203ENST00000479660 QRICH1Q2TAL8 776 aa16.44■□□□□ 0.22
CLDN18-203ENST00000479660 JAKMIP3Q5VZ66 844 aa16.44■□□□□ 0.22
CLDN18-203ENST00000479660 ERCC4Q92889 916 aaPredicted RBP16.44■□□□□ 0.22
CLDN18-203ENST00000479660 UVSSAQ2YD98 709 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 ANO6Q4KMQ2 910 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 ANGEL2Q5VTE6 544 aaKnown RBP16.43■□□□□ 0.22
CLDN18-203ENST00000479660 TRPM4Q8TD43 1214 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 RIC8AQ9NPQ8 531 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 DICER1Q9UPY3 1922 aaKnown RBP16.43■□□□□ 0.22
CLDN18-203ENST00000479660 VWA3AA6NCI4 1184 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 LONRF3Q496Y0 759 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 KIAA1755Q5JYT7 1200 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 SYDE2Q5VT97 1194 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 BTNL9Q6UXG8 535 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 SH2D4AQ9H788 454 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 KIAA1468Q9P260 1216 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 PCDHA1Q9Y5I3 950 aa16.43■□□□□ 0.22
CLDN18-203ENST00000479660 POLR2DO15514 142 aaKnown RBP16.42■□□□□ 0.22
CLDN18-203ENST00000479660 EPS15P42566 896 aa16.42■□□□□ 0.22
CLDN18-203ENST00000479660 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
CLDN18-203ENST00000479660 NBPF12Q5TAG4 269 aaPredicted RBP16.42■□□□□ 0.22
CLDN18-203ENST00000479660 ARL6IP4Q66PJ3 421 aaKnown RBP16.42■□□□□ 0.22
CLDN18-203ENST00000479660 USP49Q70CQ1 688 aa16.42■□□□□ 0.22
CLDN18-203ENST00000479660 APOBEC3FQ8IUX4 373 aaKnown RBP16.42■□□□□ 0.22
CLDN18-203ENST00000479660 C4orf32Q8N8J7 132 aa16.42■□□□□ 0.22
CLDN18-203ENST00000479660 CNNM3Q8NE01 707 aa16.42■□□□□ 0.22
CLDN18-203ENST00000479660 FAM200AQ8TCP9 573 aa16.42■□□□□ 0.22
CLDN18-203ENST00000479660 CUL5Q93034 780 aa16.42■□□□□ 0.22
CLDN18-203ENST00000479660 VCPKMTQ9H867 229 aa16.42■□□□□ 0.22
CLDN18-203ENST00000479660 TMEM260Q9NX78 707 aa16.42■□□□□ 0.22
CLDN18-203ENST00000479660 SBF1O95248 1867 aa16.42■□□□□ 0.22
CLDN18-203ENST00000479660 STAT2P52630 851 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 ZYXQ15942 572 aaKnown RBP16.41■□□□□ 0.22
CLDN18-203ENST00000479660 LETM2Q2VYF4 491 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 KRBA2Q6ZNG9 492 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 NEK8Q86SG6 692 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 CCDC84Q86UT8 332 aaPredicted RBP16.41■□□□□ 0.22
CLDN18-203ENST00000479660 TBCKQ8TEA7 893 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 EPSTI1Q96J88 318 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 GLIS2Q9BZE0 524 aaPredicted RBP16.41■□□□□ 0.22
CLDN18-203ENST00000479660 PSTPIP2Q9H939 334 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 RNF181Q9P0P0 153 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 YBX3P16989 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLDN18-203ENST00000479660 SNAP25P60880 206 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 FAM83BQ5T0W9 1011 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 PDILTQ8N807 584 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 SYMPKQ92797 1274 aaKnown RBP16.41■□□□□ 0.22
CLDN18-203ENST00000479660 AMNQ9BXJ7 453 aa16.41■□□□□ 0.22
CLDN18-203ENST00000479660 CCNT1O60563 726 aaKnown RBP16.4■□□□□ 0.22
CLDN18-203ENST00000479660 CTNND1O60716 968 aaKnown RBP16.4■□□□□ 0.22
CLDN18-203ENST00000479660 DDNO94850 711 aaPredicted RBP16.4■□□□□ 0.22
CLDN18-203ENST00000479660 CCDC173Q0VFZ6 552 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 STX1AQ16623 288 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 DCAF15Q66K64 600 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 GLT8D2Q9H1C3 349 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 DNAJC25Q9H1X3 360 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 PRR12Q9ULL5 1215 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 CAVIN2O95810 425 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 HIRAP54198 1017 aaPredicted RBP16.4■□□□□ 0.22
CLDN18-203ENST00000479660 ZRSR1Q15695 479 aaKnown RBP16.4■□□□□ 0.22
CLDN18-203ENST00000479660 IL17AQ16552 155 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 UBE2SQ16763 222 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 FBXO11Q86XK2 927 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 ZNF341Q9BYN7 854 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 TMEM60Q9H2L4 133 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 GINM1Q9NU53 330 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 ANO10Q9NW15 660 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 GGA3Q9NZ52 723 aa16.4■□□□□ 0.22
CLDN18-203ENST00000479660 LAD1O00515 517 aa16.39■□□□□ 0.21
CLDN18-203ENST00000479660 CLK2P49760 499 aaKnown RBP16.39■□□□□ 0.21
CLDN18-203ENST00000479660 ZNF165P49910 485 aa16.39■□□□□ 0.21
CLDN18-203ENST00000479660 PRAMEF18Q5VWM3 479 aa16.39■□□□□ 0.21
CLDN18-203ENST00000479660 DTHD1Q6ZMT9 781 aa16.39■□□□□ 0.21
CLDN18-203ENST00000479660 ELOA2Q8IYF1 753 aaPredicted RBP16.39■□□□□ 0.21
CLDN18-203ENST00000479660 CHURC1Q8WUH1 139 aa16.39■□□□□ 0.21
CLDN18-203ENST00000479660 HOOK2Q96ED9 719 aa16.39■□□□□ 0.21
CLDN18-203ENST00000479660 FEZ1Q99689 392 aa16.39■□□□□ 0.21
CLDN18-203ENST00000479660 HOOK1Q9UJC3 728 aaKnown RBP16.39■□□□□ 0.21
CLDN18-203ENST00000479660 LONP1P36776 959 aaKnown RBP16.38■□□□□ 0.21
CLDN18-203ENST00000479660 CBX8Q9HC52 389 aa16.38■□□□□ 0.21
CLDN18-203ENST00000479660 SERTAD1Q9UHV2 236 aa16.38■□□□□ 0.21
CLDN18-203ENST00000479660 A0A087WWV3 80 aa16.38■□□□□ 0.21
CLDN18-203ENST00000479660 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
CLDN18-203ENST00000479660 INPP5BP32019 993 aa16.38■□□□□ 0.21
CLDN18-203ENST00000479660 PNOCQ13519 176 aa16.38■□□□□ 0.21
CLDN18-203ENST00000479660 USH1GQ495M9 461 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms