RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 MPZL3Q6UWV2 235 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 CCDC81Q6ZN84 652 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 RNF111Q6ZNA4 994 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 LCNL1Q6ZST4 164 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 LSRQ86X29 649 aaPredicted RBP5.83□□□□□ -1.48
GPNMB-210ENST00000478451 C1QL4Q86Z23 238 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 ZNF655Q8N720 491 aaPredicted RBP5.83□□□□□ -1.48
GPNMB-210ENST00000478451 RBBP8NLQ8NC74 664 aaPredicted RBP5.83□□□□□ -1.48
GPNMB-210ENST00000478451 PDZD8Q8NEN9 1154 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 MYLIPQ8WY64 445 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 TCTN2Q96GX1 697 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 FAM53CQ9NYF3 392 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 SUCOQ9UBS9 1254 aaKnown RBP5.83□□□□□ -1.48
GPNMB-210ENST00000478451 EFR3BQ9Y2G0 817 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 PCDHB12Q9Y5F1 795 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 ADCY10Q96PN6 1610 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 GUCY2CP25092 1073 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 SOX9P48436 509 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 MESP2Q0VG99 397 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 DUSP4Q13115 394 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 DDX10Q13206 875 aaKnown RBP5.82□□□□□ -1.48
GPNMB-210ENST00000478451 MLANAQ16655 118 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 RUFY4Q6ZNE9 571 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 OXR1Q8N573 874 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 USHBP1Q8N6Y0 703 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 RASGRP4Q8TDF6 673 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 DHRS1Q96LJ7 313 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 FOXP3Q9BZS1 431 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 CHST7Q9NS84 486 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 GFOD1Q9NXC2 390 aa5.82□□□□□ -1.48
GPNMB-210ENST00000478451 RAPGEF6Q8TEU7 1601 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 EPRSP07814 1512 aaKnown RBP5.81□□□□□ -1.48
GPNMB-210ENST00000478451 SSU72P8A0A1W2PR75 194 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 FITM1A5D6W6 292 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 C9IYK1 514 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 ERCC5P28715 1186 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-210ENST00000478451 TRHRP34981 398 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-210ENST00000478451 GJA8P48165 433 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 PMS1P54277 932 aaKnown RBP5.81□□□□□ -1.48
GPNMB-210ENST00000478451 PCBP3P57721 371 aaKnown RBP5.81□□□□□ -1.48
GPNMB-210ENST00000478451 AUHQ13825 339 aaKnown RBP5.81□□□□□ -1.48
GPNMB-210ENST00000478451 BBS9Q3SYG4 887 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 TDRD10Q5VZ19 366 aaKnown RBP5.81□□□□□ -1.48
GPNMB-210ENST00000478451 PPFIBP1Q86W92 1011 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 CCDC144CPQ8IYA2 1237 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 ANKS4BQ8N8V4 417 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 SMARCC1Q92922 1105 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-210ENST00000478451 CRBNQ96SW2 442 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 TGIF2Q9GZN2 237 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 SP110Q9HB58 689 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 FBXL21Q9UKT6 434 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 TCFL5Q9UL49 500 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 MINPP1Q9UNW1 487 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 KIAA0556O60303 1618 aa5.81□□□□□ -1.48
GPNMB-210ENST00000478451 MEIS1O00470 390 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 SHOXO15266 292 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 SYPP08247 313 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 RPL10P27635 214 aaKnown RBP5.8□□□□□ -1.48
GPNMB-210ENST00000478451 CHRNEQ04844 493 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 ZYXQ15942 572 aaKnown RBP5.8□□□□□ -1.48
GPNMB-210ENST00000478451 ERICH6BQ5W0A0 696 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 UNC5AQ6ZN44 842 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 PRR23BQ6ZRT6 265 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 WAPLQ7Z5K2 1190 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 LILRA2Q8N149 483 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 LINC00116Q8NCU8 138 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 SIN3AQ96ST3 1273 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 G6PC3Q9BUM1 346 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 RNF32Q9H0A6 362 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 ACBD3Q9H3P7 528 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 C19orf44Q9H6X5 657 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 CCSER2Q9H7U1 834 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 PRR13Q9NZ81 148 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 EBF1Q9UH73 591 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 ZNF281Q9Y2X9 895 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 KIF14Q15058 1648 aa5.8□□□□□ -1.48
GPNMB-210ENST00000478451 FKTNO75072 461 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 RAP1GAPP47736 663 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 EIF6P56537 245 aaKnown RBP5.79□□□□□ -1.48
GPNMB-210ENST00000478451 NR0B2Q15466 257 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 TIGD5Q53EQ6 642 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 SPPL2CQ8IUH8 684 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 C7orf61Q8IZ16 206 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 LINC01599Q8WXQ3 324 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 SRRTQ9BXP5 876 aaKnown RBP5.79□□□□□ -1.48
GPNMB-210ENST00000478451 ZMYM5Q9UJ78 669 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 ROCK1Q13464 1354 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 MAGI3Q5TCQ9 1506 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 KDM5BQ9UGL1 1544 aa5.79□□□□□ -1.48
GPNMB-210ENST00000478451 MRC2Q9UBG0 1479 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 TMEM82A0PJX8 343 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 USP2O75604 605 aaPredicted RBP5.78□□□□□ -1.48
GPNMB-210ENST00000478451 CTSKP43235 329 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 GIPRP48546 466 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 NASPP49321 788 aaPredicted RBP5.78□□□□□ -1.48
GPNMB-210ENST00000478451 DCAF15Q66K64 600 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 CRTC3Q6UUV7 619 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 LRRC56Q8IYG6 542 aaPredicted RBP5.78□□□□□ -1.48
GPNMB-210ENST00000478451 OR6P1Q8NGX9 317 aa5.78□□□□□ -1.48
GPNMB-210ENST00000478451 MAP6Q96JE9 813 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms