RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CHRDQ9H2X0 955 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 FAM105AQ9NUU6 356 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 ZBTB1Q9Y2K1 713 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.26□□□□□ -1.41
CKS1B-207ENST00000477676 AMOTQ4VCS5 1084 aa6.26□□□□□ -1.41
CKS1B-207ENST00000477676 LCNL1Q6ZST4 164 aa6.26□□□□□ -1.41
CKS1B-207ENST00000477676 HOMEZQ8IX15 550 aa6.26□□□□□ -1.41
CKS1B-207ENST00000477676 GTF3C2Q8WUA4 911 aaPredicted RBP6.26□□□□□ -1.41
CKS1B-207ENST00000477676 TOX2Q96NM4 488 aa6.26□□□□□ -1.41
CKS1B-207ENST00000477676 NRSN2Q9GZP1 204 aa6.26□□□□□ -1.41
CKS1B-207ENST00000477676 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.26□□□□□ -1.41
CKS1B-207ENST00000477676 COL15A1P39059 1388 aa6.26□□□□□ -1.41
CKS1B-207ENST00000477676 KDM2BQ8NHM5 1336 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 GLTPD2A6NH11 291 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 LRRC10BA6NIK2 292 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 B8ZZF3 427 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 RNMTO43148 476 aaKnown RBP6.25□□□□□ -1.41
CKS1B-207ENST00000477676 HSPA5P11021 654 aaKnown RBP6.25□□□□□ -1.41
CKS1B-207ENST00000477676 RAP1GAPP47736 663 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 C1orf141Q5JVX7 400 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 C1QL4Q86Z23 238 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 PLD6Q8N2A8 252 aaKnown RBP6.25□□□□□ -1.41
CKS1B-207ENST00000477676 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 SLC52A2Q9HAB3 445 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 NARFQ9UHQ1 456 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 SCN4AP35499 1836 aa6.25□□□□□ -1.41
CKS1B-207ENST00000477676 ADAMTSL1Q8N6G6 1762 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 COL3A1P02461 1466 aaPredicted RBP6.24□□□□□ -1.41
CKS1B-207ENST00000477676 A6NHS1 94 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 TNFRSF21O75509 655 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 CYP11A1P05108 521 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 SERPINB2P05120 415 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 CTSBP07858 339 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 HSPA1AP0DMV8 641 aaKnown RBP6.24□□□□□ -1.41
CKS1B-207ENST00000477676 HSPA1BP0DMV9 641 aaKnown RBP6.24□□□□□ -1.41
CKS1B-207ENST00000477676 LMNB1P20700 586 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 MPSTP25325 297 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 CD96P40200 585 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 ASPAP45381 313 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 MTHFSDQ2M296 383 aaKnown RBP6.24□□□□□ -1.41
CKS1B-207ENST00000477676 CYP27C1Q4G0S4 372 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 AKAP4Q5JQC9 854 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 B4GALNT3Q6L9W6 998 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 MORC1Q86VD1 984 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 C16orf71Q8IYS4 520 aaPredicted RBP6.24□□□□□ -1.41
CKS1B-207ENST00000477676 SMC1BQ8NDV3 1235 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 NETO1Q8TDF5 533 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 VAV3Q9UKW4 847 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 POLIQ9UNA4 740 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 DLG5Q8TDM6 1919 aa6.24□□□□□ -1.41
CKS1B-207ENST00000477676 NUP98P52948 1817 aa6.23□□□□□ -1.41
CKS1B-207ENST00000477676 HMOX1P09601 288 aa6.23□□□□□ -1.41
CKS1B-207ENST00000477676 VEGFAP15692 232 aaPredicted RBP6.23□□□□□ -1.41
CKS1B-207ENST00000477676 MAOBP27338 520 aa6.23□□□□□ -1.41
CKS1B-207ENST00000477676 BUD31P41223 144 aaPredicted RBP6.23□□□□□ -1.41
CKS1B-207ENST00000477676 EIF5P55010 431 aaKnown RBP6.23□□□□□ -1.41
CKS1B-207ENST00000477676 TBC1D9BQ66K14 1250 aa6.23□□□□□ -1.41
CKS1B-207ENST00000477676 C2CD5Q86YS7 1000 aa6.23□□□□□ -1.41
CKS1B-207ENST00000477676 TTLL6Q8N841 843 aa6.23□□□□□ -1.41
CKS1B-207ENST00000477676 FAM181AQ8N9Y4 354 aa6.23□□□□□ -1.41
CKS1B-207ENST00000477676 ZSCAN18Q8TBC5 510 aaPredicted RBP6.23□□□□□ -1.41
CKS1B-207ENST00000477676 BHLHE41Q9C0J9 482 aaPredicted RBP6.23□□□□□ -1.41
CKS1B-207ENST00000477676 GSX1Q9H4S2 264 aaPredicted RBP6.23□□□□□ -1.41
CKS1B-207ENST00000477676 DAGLAQ9Y4D2 1042 aa6.23□□□□□ -1.41
CKS1B-207ENST00000477676 TRPM7Q96QT4 1865 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 EREGO14944 169 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 KCNQ3O43525 872 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 CANXP27824 592 aaKnown RBP6.22□□□□□ -1.41
CKS1B-207ENST00000477676 FKBP4Q02790 459 aaKnown RBP eCLIP6.22□□□□□ -1.41
CKS1B-207ENST00000477676 PRKCQQ04759 706 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 MLANAQ16655 118 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 PRR5LQ6MZQ0 368 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 SIAH1Q8IUQ4 282 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 LRRC56Q8IYG6 542 aaPredicted RBP6.22□□□□□ -1.41
CKS1B-207ENST00000477676 IL17REQ8NFR9 667 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 ZNF496Q96IT1 587 aaPredicted RBP6.22□□□□□ -1.41
CKS1B-207ENST00000477676 RAD18Q9NS91 495 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 POLR2AP24928 1970 aaKnown RBP6.22□□□□□ -1.41
CKS1B-207ENST00000477676 LTBP1Q14766 1721 aa6.22□□□□□ -1.41
CKS1B-207ENST00000477676 COL4A5P29400 1685 aa6.21□□□□□ -1.42
CKS1B-207ENST00000477676 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
CKS1B-207ENST00000477676 CAMTA2O94983 1202 aa6.21□□□□□ -1.42
CKS1B-207ENST00000477676 A1BGP04217 495 aa6.21□□□□□ -1.42
CKS1B-207ENST00000477676 TRIM26Q12899 539 aaPredicted RBP6.21□□□□□ -1.42
CKS1B-207ENST00000477676 OLFM4Q6UX06 510 aa6.21□□□□□ -1.42
CKS1B-207ENST00000477676 AP4E1Q9UPM8 1137 aa6.21□□□□□ -1.42
CKS1B-207ENST00000477676 PDE4DIPQ5VU43 2346 aa6.21□□□□□ -1.42
CKS1B-207ENST00000477676 CASP8AP2Q9UKL3 1982 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 HEG1Q9ULI3 1381 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 TAF1P21675 1872 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 PRAMEF22A3QJZ6 481 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 METTL12A8MUP2 240 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 H0YIN7 160 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 DDNO94850 711 aaPredicted RBP6.2□□□□□ -1.42
CKS1B-207ENST00000477676 ZSCAN22P10073 491 aaPredicted RBP6.2□□□□□ -1.42
CKS1B-207ENST00000477676 NPR3P17342 541 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 PIP4K2AP48426 406 aaPredicted RBP6.2□□□□□ -1.42
CKS1B-207ENST00000477676 POU4F3Q15319 338 aa6.2□□□□□ -1.42
CKS1B-207ENST00000477676 ZNF423Q2M1K9 1284 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms