RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 RABGGTBP53611 331 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 BEX3Q00994 111 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 C16orf86Q6ZW13 317 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 FAM126BQ8IXS8 530 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 BCL11AQ9H165 835 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 ARHGEF10LQ9HCE6 1279 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 GRIN2DO15399 1336 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 RAD21O60216 631 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 ADD2P35612 726 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 KCNQ1P51787 676 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 TFF2Q03403 129 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 SNRNP48Q6IEG0 339 aaKnown RBP11.79□□□□□ -0.52
COL4A5-204ENST00000477429 CTR9Q6PD62 1173 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 MAMDC4Q6UXC1 1216 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 CCDC129Q6ZRS4 1044 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 POTEDQ86YR6 584 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 ITPRIPQ8IWB1 547 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 SIRT2Q8IXJ6 389 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 RHPN1Q8TCX5 695 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 UPF3AQ9H1J1 476 aaKnown RBP11.79□□□□□ -0.52
COL4A5-204ENST00000477429 SWAP70Q9UH65 585 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 FAM184BQ9ULE4 1060 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 ZBED9Q6R2W3 1325 aa11.79□□□□□ -0.52
COL4A5-204ENST00000477429 TRANK1O15050 2925 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 MOXD2PA6NHM9 499 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 ARVCFO00192 962 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 RFXAPO00287 272 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 ARHGEF15O94989 841 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 CD4P01730 458 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 C6orf222P0C671 652 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-204ENST00000477429 CST5P28325 142 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-204ENST00000477429 SLC4A3P48751 1232 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 CNTN2Q02246 1040 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 ACVR2BQ13705 512 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 CCDC144BQ3MJ40 725 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 AKNAD1Q5T1N1 836 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 PANK1Q8TE04 598 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-204ENST00000477429 CNPY2Q9Y2B0 182 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 ANKRD11Q6UB99 2663 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-204ENST00000477429 GBF1Q92538 1859 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 GREB1LQ9C091 1923 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-204ENST00000477429 MCM3APO60318 1980 aa11.78□□□□□ -0.52
COL4A5-204ENST00000477429 ZNF318Q5VUA4 2279 aa11.77□□□□□ -0.52
COL4A5-204ENST00000477429 DUSP11O75319 330 aaKnown RBP11.77□□□□□ -0.53
COL4A5-204ENST00000477429 IGFBP4P22692 258 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 GJA9P57773 515 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 PPIGQ13427 754 aaKnown RBP eCLIP11.77□□□□□ -0.536e-13■■□□□ 11.9
COL4A5-204ENST00000477429 KRT40Q6A162 431 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 OTOP2Q7RTS6 562 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 SPRED2Q7Z698 418 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 CPXCR1Q8N123 301 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 NUP133Q8WUM0 1156 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 HERVK_113Q902F9 699 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 GAS2L1Q99501 681 aaPredicted RBP11.77□□□□□ -0.53
COL4A5-204ENST00000477429 PUS7LQ9H0K6 701 aaKnown RBP11.77□□□□□ -0.53
COL4A5-204ENST00000477429 WNT8AQ9H1J5 351 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 BOLA2Q9H3K6 86 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 RAVER2Q9HCJ3 691 aaKnown RBP11.77□□□□□ -0.53
COL4A5-204ENST00000477429 ELP1O95163 1332 aa11.77□□□□□ -0.53
COL4A5-204ENST00000477429 TPRP12270 2363 aaKnown RBP11.76□□□□□ -0.53
COL4A5-204ENST00000477429 EPOPA6NHQ4 379 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 NDUFB10O96000 172 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 RASA1P20936 1047 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 CCL23P55773 120 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 TTF1Q15361 905 aaPredicted RBP11.76□□□□□ -0.53
COL4A5-204ENST00000477429 GNASQ5JWF2 1037 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 TMED8Q6PL24 325 aaPredicted RBP11.76□□□□□ -0.53
COL4A5-204ENST00000477429 CXCL17Q6UXB2 119 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 SLC43A3Q8NBI5 491 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 PPP1R13LQ8WUF5 828 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 CCDC17Q96LX7 622 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 SLF1Q9BQI6 1058 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 TEX13BQ9BXU2 312 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 KANSL2Q9H9L4 492 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 IL23AQ9NPF7 189 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 ATP8A2Q9NTI2 1148 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 PAG1Q9NWQ8 432 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 MYH8P13535 1937 aa11.76□□□□□ -0.53
COL4A5-204ENST00000477429 IGKV6D-41A0A0C4DH26 115 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 A0A0U1RQG5 324 aaPredicted RBP11.75□□□□□ -0.53
COL4A5-204ENST00000477429 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 PRR33A8MZF0 331 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 F5H6K3 240 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 PSMC6P62333 389 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 KLRC3Q07444 240 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 ARMCX2Q7L311 632 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 CCDC144CPQ8IYA2 1237 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.75□□□□□ -0.53
COL4A5-204ENST00000477429 ANKS1AQ92625 1134 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 VTI1AQ96AJ9 217 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 CHMP4CQ96CF2 233 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 DDX11Q96FC9 970 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 GLT1D1Q96MS3 346 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 PURBQ96QR8 312 aaKnown RBP11.75□□□□□ -0.53
COL4A5-204ENST00000477429 SH2D4AQ9H788 454 aa11.75□□□□□ -0.53
COL4A5-204ENST00000477429 PDGFCQ9NRA1 345 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms