RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MVKQ03426 396 aa5.32□□□□□ -1.56
XRN1-211ENST00000477237 TBC1D10BQ4KMP7 808 aaPredicted RBP5.32□□□□□ -1.56
XRN1-211ENST00000477237 CRIP3Q6Q6R5 217 aa5.32□□□□□ -1.56
XRN1-211ENST00000477237 TMEM52Q8NDY8 209 aa5.32□□□□□ -1.56
XRN1-211ENST00000477237 SH3RF3Q8TEJ3 882 aaPredicted RBP5.32□□□□□ -1.56
XRN1-211ENST00000477237 CDADC1Q9BWV3 514 aa5.32□□□□□ -1.56
XRN1-211ENST00000477237 POLR3KQ9Y2Y1 108 aaPredicted RBP5.32□□□□□ -1.56
XRN1-211ENST00000477237 SIGLEC6O43699 453 aa5.31□□□□□ -1.56
XRN1-211ENST00000477237 HTR3BO95264 441 aa5.31□□□□□ -1.56
XRN1-211ENST00000477237 BPNT1O95861 308 aa5.31□□□□□ -1.56
XRN1-211ENST00000477237 MC3RP41968 323 aa5.31□□□□□ -1.56
XRN1-211ENST00000477237 NBPF12Q5TAG4 269 aaPredicted RBP5.31□□□□□ -1.56
XRN1-211ENST00000477237 PHC3Q8NDX5 983 aa5.31□□□□□ -1.56
XRN1-211ENST00000477237 DVL3Q92997 716 aaPredicted RBP5.31□□□□□ -1.56
XRN1-211ENST00000477237 FRMD6Q96NE9 622 aa5.31□□□□□ -1.56
XRN1-211ENST00000477237 FAN1Q9Y2M0 1017 aa5.31□□□□□ -1.56
XRN1-211ENST00000477237 PLATP00750 562 aa5.3□□□□□ -1.56
XRN1-211ENST00000477237 DBHP09172 617 aa5.3□□□□□ -1.56
XRN1-211ENST00000477237 PAQR3Q6TCH7 311 aa5.3□□□□□ -1.56
XRN1-211ENST00000477237 CCDC84Q86UT8 332 aaPredicted RBP5.3□□□□□ -1.56
XRN1-211ENST00000477237 ZNF761Q86XN6 746 aaPredicted RBP5.3□□□□□ -1.56
XRN1-211ENST00000477237 MEIS1O00470 390 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 ZNF205O95201 554 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 F13A1P00488 732 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 CYBBP04839 570 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 CDSNQ15517 529 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 MEI1Q5TIA1 1274 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 CHST13Q8NET6 341 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 SSBP3Q9BWW4 388 aaPredicted RBP5.29□□□□□ -1.56
XRN1-211ENST00000477237 RNF38Q9H0F5 515 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 CHST7Q9NS84 486 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 AP5S1Q9NUS5 200 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 ST6GALNAC2Q9UJ37 374 aa5.29□□□□□ -1.56
XRN1-211ENST00000477237 SRGAP3O43295 1099 aa5.28□□□□□ -1.56
XRN1-211ENST00000477237 P4HBP07237 508 aaKnown RBP5.28□□□□□ -1.56
XRN1-211ENST00000477237 ENDOUP21128 410 aaKnown RBP5.28□□□□□ -1.56
XRN1-211ENST00000477237 GNA15P30679 374 aa5.28□□□□□ -1.56
XRN1-211ENST00000477237 CTSKP43235 329 aa5.28□□□□□ -1.56
XRN1-211ENST00000477237 SARSP49591 514 aaKnown RBP5.28□□□□□ -1.56
XRN1-211ENST00000477237 PRR5P85299 388 aa5.28□□□□□ -1.56
XRN1-211ENST00000477237 ZSCAN29Q8IWY8 852 aaPredicted RBP5.28□□□□□ -1.56
XRN1-211ENST00000477237 GATAD2BQ8WXI9 593 aa5.28□□□□□ -1.56
XRN1-211ENST00000477237 PCED1AQ9H1Q7 454 aa5.28□□□□□ -1.56
XRN1-211ENST00000477237 SPATA6Q9NWH7 488 aaPredicted RBP5.28□□□□□ -1.56
XRN1-211ENST00000477237 F6X3S4 739 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 FZD7O75084 574 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 LDHBP07195 334 aaKnown RBP5.27□□□□□ -1.57
XRN1-211ENST00000477237 ASGR2P07307 311 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 RLBP1P12271 317 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 NCAM1P13591 858 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 VAV1P15498 845 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 BMP8BP34820 402 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 ARSHQ5FYA8 562 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 DIEXFQ68CQ4 756 aaKnown RBP5.27□□□□□ -1.57
XRN1-211ENST00000477237 B3GNT8Q7Z7M8 397 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 ASB16Q96NS5 453 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 NOX5Q96PH1 765 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 ZNF747Q9BV97 191 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.27□□□□□ -1.57
XRN1-211ENST00000477237 AK5Q9Y6K8 562 aa5.27□□□□□ -1.57
XRN1-211ENST00000477237 A0A1W2PQ27 194 aa5.26□□□□□ -1.57
XRN1-211ENST00000477237 A0A1W2PQ64 194 aa5.26□□□□□ -1.57
XRN1-211ENST00000477237 A0A1W2PQC6 194 aa5.26□□□□□ -1.57
XRN1-211ENST00000477237 A0A1W2PQD8 194 aa5.26□□□□□ -1.57
XRN1-211ENST00000477237 F8W031 263 aaPredicted RBP5.26□□□□□ -1.57
XRN1-211ENST00000477237 TGM1P22735 817 aa5.26□□□□□ -1.57
XRN1-211ENST00000477237 CAMK2GQ13555 558 aaPredicted RBP5.26□□□□□ -1.57
XRN1-211ENST00000477237 ZNF512BQ96KM6 892 aaPredicted RBP5.26□□□□□ -1.57
XRN1-211ENST00000477237 RNF19AQ9NV58 838 aa5.26□□□□□ -1.57
XRN1-211ENST00000477237 NTMQ9P121 344 aa5.26□□□□□ -1.57
XRN1-211ENST00000477237 TSC22D4Q9Y3Q8 395 aa5.26□□□□□ -1.57
XRN1-211ENST00000477237 PF4P02776 101 aa5.25□□□□□ -1.57
XRN1-211ENST00000477237 POLR2BP30876 1174 aaKnown RBP5.25□□□□□ -1.57
XRN1-211ENST00000477237 LMNB2Q03252 620 aa5.25□□□□□ -1.57
XRN1-211ENST00000477237 KLF10Q13118 480 aa5.25□□□□□ -1.57
XRN1-211ENST00000477237 RTP2Q5QGT7 225 aa5.25□□□□□ -1.57
XRN1-211ENST00000477237 BICRALQ6AI39 1079 aa5.25□□□□□ -1.57
XRN1-211ENST00000477237 VPS11Q9H270 941 aa5.25□□□□□ -1.57
XRN1-211ENST00000477237 GFOD1Q9NXC2 390 aa5.25□□□□□ -1.57
XRN1-211ENST00000477237 GNEQ9Y223 722 aaKnown RBP5.25□□□□□ -1.57
XRN1-211ENST00000477237 RAG1P15918 1043 aa5.24□□□□□ -1.57
XRN1-211ENST00000477237 CRTC3Q6UUV7 619 aa5.24□□□□□ -1.57
XRN1-211ENST00000477237 USP51Q70EK9 711 aa5.24□□□□□ -1.57
XRN1-211ENST00000477237 LIMS2Q7Z4I7 341 aa5.24□□□□□ -1.57
XRN1-211ENST00000477237 ADAMTS17Q8TE56 1095 aa5.24□□□□□ -1.57
XRN1-211ENST00000477237 KISS1RQ969F8 398 aaPredicted RBP5.24□□□□□ -1.57
XRN1-211ENST00000477237 BCAS3Q9H6U6 928 aa5.24□□□□□ -1.57
XRN1-211ENST00000477237 INVSQ9Y283 1065 aa5.24□□□□□ -1.57
XRN1-211ENST00000477237 AMHP03971 560 aa5.23□□□□□ -1.57
XRN1-211ENST00000477237 PMLP29590 882 aa5.23□□□□□ -1.57
XRN1-211ENST00000477237 SMARCC2Q8TAQ2 1214 aa5.23□□□□□ -1.57
XRN1-211ENST00000477237 ALG3Q92685 438 aa5.23□□□□□ -1.57
XRN1-211ENST00000477237 NOC4LQ9BVI4 516 aaKnown RBP5.23□□□□□ -1.57
XRN1-211ENST00000477237 ANTXR1Q9H6X2 564 aa5.23□□□□□ -1.57
XRN1-211ENST00000477237 PDLIM7Q9NR12 457 aa5.23□□□□□ -1.57
XRN1-211ENST00000477237 ING1Q9UK53 422 aaPredicted RBP5.23□□□□□ -1.57
XRN1-211ENST00000477237 A0A1W2PQJ5 194 aa5.22□□□□□ -1.57
XRN1-211ENST00000477237 TACR1P25103 407 aa5.22□□□□□ -1.57
XRN1-211ENST00000477237 HLA-DQA1Q5Y7H0 255 aa5.22□□□□□ -1.57
XRN1-211ENST00000477237 TTLL7Q6ZT98 887 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms