RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 CAMTA2O94983 1202 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 CASP14P31944 242 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 KCTD19Q17RG1 926 aaPredicted RBP9.41□□□□□ -0.9
VAPB-205ENST00000476395 RPAINQ86UA6 219 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 STAMQ92783 540 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 CAPZA3Q96KX2 299 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 RNF26Q9BY78 433 aaPredicted RBP9.41□□□□□ -0.9
VAPB-205ENST00000476395 CNNM2Q9H8M5 875 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 MED4Q9NPJ6 270 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 COL24A1Q17RW2 1714 aa9.41□□□□□ -0.9
VAPB-205ENST00000476395 NAIF1Q69YI7 327 aaPredicted RBP9.4□□□□□ -0.9
VAPB-205ENST00000476395 SRBD1Q8N5C6 995 aaKnown RBP9.4□□□□□ -0.9
VAPB-205ENST00000476395 ZNF831Q5JPB2 1677 aa9.4□□□□□ -0.9
VAPB-205ENST00000476395 STARD3NLO95772 234 aa9.4□□□□□ -0.9
VAPB-205ENST00000476395 PMS1P54277 932 aaKnown RBP9.4□□□□□ -0.9
VAPB-205ENST00000476395 DYNLL1P63167 89 aaKnown RBP9.4□□□□□ -0.9
VAPB-205ENST00000476395 ATP2C1P98194 919 aaPredicted RBP9.4□□□□□ -0.9
VAPB-205ENST00000476395 NAALADL2Q58DX5 795 aa9.4□□□□□ -0.9
VAPB-205ENST00000476395 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
VAPB-205ENST00000476395 RRP36Q96EU6 259 aaKnown RBP9.4□□□□□ -0.9
VAPB-205ENST00000476395 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.4□□□□□ -0.9
VAPB-205ENST00000476395 GRIN2DO15399 1336 aa9.4□□□□□ -0.9
VAPB-205ENST00000476395 ITIH6Q6UXX5 1313 aa9.4□□□□□ -0.9
VAPB-205ENST00000476395 FAM205AQ6ZU69 1335 aa9.4□□□□□ -0.9
VAPB-205ENST00000476395 AKR1B15C9JRZ8 316 aaPredicted RBP9.4□□□□□ -0.91
VAPB-205ENST00000476395 UBAP1LF5GYI3 381 aa9.4□□□□□ -0.91
VAPB-205ENST00000476395 PRPF3O43395 683 aaKnown RBP9.4□□□□□ -0.91
VAPB-205ENST00000476395 CCDC175P0C221 793 aa9.4□□□□□ -0.91
VAPB-205ENST00000476395 KLRK1P26718 216 aa9.4□□□□□ -0.91
VAPB-205ENST00000476395 INPP5BP32019 993 aa9.4□□□□□ -0.91
VAPB-205ENST00000476395 IL6STP40189 918 aaPredicted RBP9.4□□□□□ -0.91
VAPB-205ENST00000476395 AFMP43652 599 aa9.4□□□□□ -0.91
VAPB-205ENST00000476395 RRP12Q5JTH9 1297 aaKnown RBP9.4□□□□□ -0.91
VAPB-205ENST00000476395 PRPF38AQ8NAV1 312 aaKnown RBP9.4□□□□□ -0.91
VAPB-205ENST00000476395 N4BP2L2Q92802 583 aaPredicted RBP9.4□□□□□ -0.91
VAPB-205ENST00000476395 LIMA1Q9UHB6 759 aaKnown RBP9.4□□□□□ -0.91
VAPB-205ENST00000476395 SYNRGQ9UMZ2 1314 aa9.4□□□□□ -0.91
VAPB-205ENST00000476395 CTAGE15A4D2H0 777 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 MPHOSPH10O00566 681 aaKnown RBP9.39□□□□□ -0.91
VAPB-205ENST00000476395 CTAGE8P0CG41 777 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 KRT31Q15323 416 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 GBP6Q6ZN66 633 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 CTAGE6Q86UF2 777 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 CTAGE4Q8IX94 777 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 ZKSCAN4Q969J2 545 aaPredicted RBP9.39□□□□□ -0.91
VAPB-205ENST00000476395 CENPHQ9H3R5 247 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 IRS2Q9Y4H2 1338 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 KIF5CO60282 957 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 SSBP05455 408 aaKnown RBP eCLIP9.39□□□□□ -0.91
VAPB-205ENST00000476395 CHRNDQ07001 517 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 MAP9Q49MG5 647 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 RCSD1Q6JBY9 416 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 TYW1BQ6NUM6 668 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 WDR59Q6PJI9 974 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 FAXDC2Q96IV6 333 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 BLZF1Q9H2G9 400 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 IQSEC3Q9UPP2 1182 aaPredicted RBP9.39□□□□□ -0.91
VAPB-205ENST00000476395 TNRC6CQ9HCJ0 1690 aaKnown RBP9.39□□□□□ -0.91
VAPB-205ENST00000476395 CCDC88AQ3V6T2 1871 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 EBAG9O00559 213 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 GNGT1P63211 74 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 MAP3K12Q12852 859 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 PDCLQ13371 301 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 ITPK1Q13572 414 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 TRIM29Q14134 588 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 RBM26Q5T8P6 1007 aaKnown RBP9.39□□□□□ -0.91
VAPB-205ENST00000476395 SH2D3CQ8N5H7 860 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 CEP112Q8N8E3 955 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 ZSCAN10Q96SZ4 725 aaPredicted RBP9.39□□□□□ -0.91
VAPB-205ENST00000476395 MMS19Q96T76 1030 aa9.39□□□□□ -0.91
VAPB-205ENST00000476395 CTAGE9A4FU28 777 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 NEBLO76041 1014 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 SLC5A1P13866 664 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 ATP1A2P50993 1020 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 EZH2Q15910 746 aaKnown RBP9.38□□□□□ -0.91
VAPB-205ENST00000476395 KLHL10Q6JEL2 608 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 CHP1Q99653 195 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 ABHD10Q9NUJ1 306 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 H0YHG0 523 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 ZNF185O15231 689 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 KLRC4O43908 158 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 FNTAP49354 379 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 ZNF174Q15697 407 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 TMTC3Q6ZXV5 915 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 ZNF507Q8TCN5 953 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 WASF1Q92558 559 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 CCDC97Q96F63 343 aaPredicted RBP9.38□□□□□ -0.91
VAPB-205ENST00000476395 CALR3Q96L12 384 aaKnown RBP9.38□□□□□ -0.91
VAPB-205ENST00000476395 GSDMAQ96QA5 445 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 V9GY48 417 aaPredicted RBP9.38□□□□□ -0.91
VAPB-205ENST00000476395 SEMA3EO15041 775 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 GYG1P46976 350 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 PTGDRQ13258 359 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 KCTD16Q68DU8 428 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 NUP133Q8WUM0 1156 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 TTYH3Q9C0H2 523 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 BTG4Q9NY30 223 aa9.38□□□□□ -0.91
VAPB-205ENST00000476395 CCDC196A0A1B0GTZ2 297 aa9.37□□□□□ -0.91
VAPB-205ENST00000476395 GOLGA6CA6NDK9 693 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms