RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 NRDCO43847 1150 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 ALDH1B1P30837 517 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 DNAI1Q9UI46 699 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 SERPINB13Q9UIV8 391 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 MYH1P12882 1939 aa18.81■□□□□ 0.6
TVP23B-202ENST00000476139 TXLNAP40222 546 aa18.8■□□□□ 0.6
TVP23B-202ENST00000476139 CREBRFQ8IUR6 639 aa18.8■□□□□ 0.6
TVP23B-202ENST00000476139 RPN1P04843 607 aaKnown RBP18.8■□□□□ 0.6
TVP23B-202ENST00000476139 UBA7P41226 1012 aa18.8■□□□□ 0.6
TVP23B-202ENST00000476139 CDKAL1Q5VV42 579 aa18.8■□□□□ 0.6
TVP23B-202ENST00000476139 RIOX1Q9H6W3 641 aa18.8■□□□□ 0.6
TVP23B-202ENST00000476139 C6orf50Q9HD87 102 aa18.8■□□□□ 0.6
TVP23B-202ENST00000476139 ANKRD31Q8N7Z5 1873 aa18.79■□□□□ 0.6
TVP23B-202ENST00000476139 TBCKQ8TEA7 893 aa18.79■□□□□ 0.6
TVP23B-202ENST00000476139 NONOQ15233 471 aaKnown RBP eCLIP18.79■□□□□ 0.6
TVP23B-202ENST00000476139 KIAA0825Q8IV33 1275 aa18.79■□□□□ 0.6
TVP23B-202ENST00000476139 CPLX3Q8WVH0 158 aa18.79■□□□□ 0.6
TVP23B-202ENST00000476139 BAG1Q99933 345 aaPredicted RBP18.79■□□□□ 0.6
TVP23B-202ENST00000476139 ADD3Q9UEY8 706 aaKnown RBP18.79■□□□□ 0.6
TVP23B-202ENST00000476139 PARP3Q9Y6F1 533 aa18.79■□□□□ 0.6
TVP23B-202ENST00000476139 FAM196BA6NMK8 535 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 GNA11P29992 359 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 PDE6BP35913 854 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 PRCPP42785 496 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 KCNJ6P48051 423 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 ATP2B2Q01814 1243 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 TCP10Q12799 353 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 DHX8Q14562 1220 aaKnown RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 ERCC6LQ2NKX8 1250 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 KMT5BQ4FZB7 885 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 SOGA3Q5TF21 947 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 TTBK2Q6IQ55 1244 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 SUGT1Q9Y2Z0 365 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 MPHOSPH10O00566 681 aaKnown RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 SLU7O95391 586 aaKnown RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 SHMT1P34896 483 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 CCT6AP40227 531 aaKnown RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 TECP42680 631 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 CT47A1Q5JQC4 288 aaPredicted RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 CCDC12Q8WUD4 166 aaPredicted RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 MASTLQ96GX5 879 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 PLSCR1O15162 318 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 ZSCAN20P17040 1043 aaPredicted RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 SLC16A2P36021 539 aa18.78■□□□□ 0.6
TVP23B-202ENST00000476139 ZNF658Q5TYW1 1059 aaPredicted RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 SMAP1Q8IYB5 467 aaPredicted RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 PYM1Q9BRP8 204 aaKnown RBP18.78■□□□□ 0.6
TVP23B-202ENST00000476139 LRRC37AA6NMS7 1700 aa18.77■□□□□ 0.6
TVP23B-202ENST00000476139 UTRNP46939 3433 aa18.77■□□□□ 0.6
TVP23B-202ENST00000476139 IGKV6D-41A0A0C4DH26 115 aa18.77■□□□□ 0.6
TVP23B-202ENST00000476139 KRT25Q7Z3Z0 450 aa18.77■□□□□ 0.6
TVP23B-202ENST00000476139 NEK8Q86SG6 692 aa18.77■□□□□ 0.6
TVP23B-202ENST00000476139 TEKT1Q969V4 418 aa18.77■□□□□ 0.6
TVP23B-202ENST00000476139 ZHX1Q9UKY1 873 aaPredicted RBP18.77■□□□□ 0.6
TVP23B-202ENST00000476139 TTLL1O95922 423 aa18.77■□□□□ 0.59
TVP23B-202ENST00000476139 REXO1L1PQ8IX06 675 aa18.77■□□□□ 0.59
TVP23B-202ENST00000476139 NELFBQ8WX92 580 aa18.77■□□□□ 0.59
TVP23B-202ENST00000476139 SMARCA1P28370 1054 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 RBL2Q08999 1139 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 REXO1Q8N1G1 1221 aaKnown RBP18.76■□□□□ 0.59
TVP23B-202ENST00000476139 TMX4Q9H1E5 349 aaPredicted RBP18.76■□□□□ 0.59
TVP23B-202ENST00000476139 CGNQ9P2M7 1197 aaKnown RBP18.76■□□□□ 0.59
TVP23B-202ENST00000476139 TRIM49BA6NDI0 452 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 FANCGO15287 622 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 OR52Z1P0C646 297 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 CRKP46108 304 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 PAK1Q13153 545 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 FBXO38Q6PIJ6 1188 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 TOGARAM2Q6ZUX3 1019 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 CCSER1Q9C0I3 900 aa18.76■□□□□ 0.59
TVP23B-202ENST00000476139 EDIL3O43854 480 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 SNHG28P0DPA3 235 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 PLCG1P19174 1290 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 PMS1P54277 932 aaKnown RBP18.75■□□□□ 0.59
TVP23B-202ENST00000476139 KCTD1Q719H9 257 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 ADGRF4Q8IZF3 695 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 IGSF22Q8N9C0 903 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 EEF2KMTQ96G04 330 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 VPS16Q9H269 839 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 KBTBD4Q9NVX7 518 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 RWDD2AQ9UIY3 292 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 LAD1O00515 517 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 ARHGAP6O43182 974 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 RAD21O60216 631 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 PPP1R11O60927 126 aaPredicted RBP18.75■□□□□ 0.59
TVP23B-202ENST00000476139 PRPHP41219 470 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 MTF1Q14872 753 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 HHIPL2Q6UWX4 724 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 ERO1AQ96HE7 468 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 JMJD4Q9H9V9 463 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 TXKP42681 527 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 RBM5P52756 815 aaKnown RBP eCLIP18.75■□□□□ 0.59
TVP23B-202ENST00000476139 KRT31Q15323 416 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 SYCP1Q15431 976 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 TRIM65Q6PJ69 517 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 CABP7Q86V35 215 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 DNAJC18Q9H819 358 aa18.75■□□□□ 0.59
TVP23B-202ENST00000476139 PPP2R2CQ9Y2T4 447 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms