RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 EDN3P14138 238 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 EIF2S2P20042 333 aaKnown RBP5.35□□□□□ -1.55
VPS13D-206ENST00000476045 CD68P34810 354 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-206ENST00000476045 EPHX2P34913 555 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 KIAA2012Q0VF49 1180 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 TCIRG1Q13488 830 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 GRAPQ13588 217 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 UVSSAQ2YD98 709 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 ZMYM1Q5SVZ6 1142 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 SUSD4Q5VX71 490 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 DPP8Q6V1X1 898 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-206ENST00000476045 KIAA1211Q6ZU35 1233 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 NLRP10Q86W26 655 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 SYNE4Q8N205 404 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 GRAPLQ8TC17 118 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-206ENST00000476045 XAGE3Q8WTP9 111 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 NXPE3Q969Y0 559 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 HHIPQ96QV1 700 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 ZKSCAN3Q9BRR0 538 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 LACRTQ9GZZ8 138 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 SOX17Q9H6I2 414 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-206ENST00000476045 CHPF2Q9P2E5 772 aa5.35□□□□□ -1.55
VPS13D-206ENST00000476045 FOXD3Q9UJU5 478 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-206ENST00000476045 PAPPA2Q9BXP8 1791 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 RTL9Q8NET4 1388 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 IL16Q14005 1332 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 PHACTR2O75167 634 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 ZNF853P0CG23 659 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 SERPINB4P48594 390 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 TNIP1Q15025 636 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 CCDC27Q2M243 656 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 PROSER3Q2NL68 480 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 C8orf34Q49A92 452 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 USP50Q70EL3 339 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-206ENST00000476045 COPS6Q7L5N1 327 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 VN1R5Q7Z5H4 357 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 CCDC146Q8IYE0 955 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 NGEFQ8N5V2 710 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 FAM46AQ96IP4 442 aaKnown RBP5.34□□□□□ -1.55
VPS13D-206ENST00000476045 CCDC136Q96JN2 1154 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 CITED4Q96RK1 184 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 EYA3Q99504 573 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 ZFYVE28Q9HCC9 887 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 SEC31BQ9NQW1 1179 aa5.34□□□□□ -1.55
VPS13D-206ENST00000476045 SH2B1Q9NRF2 756 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-206ENST00000476045 ADARB2Q9NS39 739 aaKnown RBP5.34□□□□□ -1.55
VPS13D-206ENST00000476045 TRMT112Q9UI30 125 aaKnown RBP5.34□□□□□ -1.55
VPS13D-206ENST00000476045 POLR2AP24928 1970 aaKnown RBP5.33□□□□□ -1.56
VPS13D-206ENST00000476045 MYH13Q9UKX3 1938 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 RASSF10A6NK89 507 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 H3BRB1 525 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 HSPA1AP0DMV8 641 aaKnown RBP5.33□□□□□ -1.56
VPS13D-206ENST00000476045 HSPA1BP0DMV9 641 aaKnown RBP5.33□□□□□ -1.56
VPS13D-206ENST00000476045 RPS12P25398 132 aaKnown RBP5.33□□□□□ -1.56
VPS13D-206ENST00000476045 ECE1P42892 770 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 SF3B3Q15393 1217 aaKnown RBP5.33□□□□□ -1.56
VPS13D-206ENST00000476045 EAPPQ56P03 285 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-206ENST00000476045 ARTNQ5T4W7 220 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 CCDC30Q5VVM6 783 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 DUSP27Q5VZP5 1158 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 FAM117BQ6P1L5 589 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 TXNDC11Q6PKC3 985 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 GALNT12Q8IXK2 581 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 SP8Q8IXZ3 490 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 ZBTB38Q8NAP3 1195 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-206ENST00000476045 CCDC191Q8NCU4 936 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 BSNDQ8WZ55 320 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 UBL7Q96S82 380 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-206ENST00000476045 ISCA1Q9BUE6 129 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 STK31Q9BXU1 1019 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 NRSN2Q9GZP1 204 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 TUT1Q9H6E5 874 aaKnown RBP5.33□□□□□ -1.56
VPS13D-206ENST00000476045 ZNRF3Q9ULT6 936 aa5.33□□□□□ -1.56
VPS13D-206ENST00000476045 GNEQ9Y223 722 aaKnown RBP5.33□□□□□ -1.56
VPS13D-206ENST00000476045 COL1A1P02452 1464 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-206ENST00000476045 CA12O43570 354 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 ALX3O95076 343 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 ABL1P00519 1130 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 ANXA1P04083 346 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 PCCAP05165 728 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-206ENST00000476045 MMP14P50281 582 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 PDE4CQ08493 712 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 NEXNQ0ZGT2 675 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 AIMP1Q12904 312 aaKnown RBP5.32□□□□□ -1.56
VPS13D-206ENST00000476045 LRP8Q14114 963 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 AOC3Q16853 763 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 CCDC152Q4G0S7 254 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 CIAPIN1Q6FI81 312 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 ARMC10Q8N2F6 343 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 AGGF1Q8N302 714 aaeCLIP5.32□□□□□ -1.56
VPS13D-206ENST00000476045 TTC16Q8NEE8 873 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 EXOC6Q8TAG9 804 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 KLHDC7BQ96G42 594 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 HHIPL1Q96JK4 782 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 OSMRQ99650 979 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 CEP41Q9BYV8 373 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 ANO2Q9NQ90 1003 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 PRDM10Q9NQV6 1147 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 GPRC5DQ9NZD1 345 aa5.32□□□□□ -1.56
VPS13D-206ENST00000476045 RNF112Q9ULX5 631 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms