RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 MSRB2Q9Y3D2 182 aa8.53□□□□□ -1.04
TM9SF3-204ENST00000475401 GDNFP39905 211 aa8.52□□□□□ -1.05
TM9SF3-204ENST00000475401 SEPHS1P49903 392 aa8.52□□□□□ -1.05
TM9SF3-204ENST00000475401 CHRNEQ04844 493 aa8.52□□□□□ -1.05
TM9SF3-204ENST00000475401 TRIM59Q8IWR1 403 aa8.52□□□□□ -1.05
TM9SF3-204ENST00000475401 LRRC47Q8N1G4 583 aaKnown RBP8.52□□□□□ -1.05
TM9SF3-204ENST00000475401 FCRL2Q96LA5 508 aaPredicted RBP8.52□□□□□ -1.05
TM9SF3-204ENST00000475401 SLC12A9Q9BXP2 914 aa8.52□□□□□ -1.05
TM9SF3-204ENST00000475401 GPR55Q9Y2T6 319 aaPredicted RBP8.52□□□□□ -1.05
TM9SF3-204ENST00000475401 VAMP4O75379 141 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 ITGAVP06756 1048 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 AFMP43652 599 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 EEF1DP3Q658K8 133 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 ZNF227Q86WZ6 799 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 KSR1Q8IVT5 923 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 ANKS4BQ8N8V4 417 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 PDZD8Q8NEN9 1154 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 SGSM3Q96HU1 749 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 ZSWIM4Q9H7M6 989 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
TM9SF3-204ENST00000475401 FITM1A5D6W6 292 aa8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 STXBP3O00186 592 aa8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 ZGLP1P0C6A0 271 aa8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 SLC14A2Q15849 920 aa8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 CYP2R1Q6VVX0 501 aa8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 ZNF513Q8N8E2 541 aaPredicted RBP8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 MRFAP1L1Q96HT8 127 aa8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 MAP6Q96JE9 813 aa8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 FCRL3Q96P31 734 aaPredicted RBP8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 SNTG2Q9NY99 539 aa8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 TNFRSF10DQ9UBN6 386 aa8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 BACE2Q9Y5Z0 518 aa8.5□□□□□ -1.05
TM9SF3-204ENST00000475401 TMEM82A0PJX8 343 aa8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 C2orf71A6NGG8 1288 aa8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 AURKAO14965 403 aa8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 TBC1D8O95759 1140 aa8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 KIR2DL1P43626 348 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 KIR2DL2P43627 348 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 RBM10P98175 930 aaKnown RBP8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 HSP90AA2PQ14568 343 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 GTF2IRD2BQ6EKJ0 949 aa8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 ATG4DQ86TL0 474 aaPredicted RBP8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 GTF2IRD2Q86UP8 949 aa8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 CCDC140Q96MF4 163 aa8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 LNPKQ9C0E8 428 aa8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 ADGRE2Q9UHX3 823 aa8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 CTNND2Q9UQB3 1225 aa8.49□□□□□ -1.05
TM9SF3-204ENST00000475401 TRBV23OR9-2A0A075B6M9 112 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 IFNGR1P15260 489 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 HOXC12P31275 282 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 SSRP1Q08945 709 aaKnown RBP8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 BMS1Q14692 1282 aaKnown RBP8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 RTP2Q5QGT7 225 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 HLA-DQA1Q5Y7H0 255 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 RCSD1Q6JBY9 416 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 JAMLQ86YT9 394 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 MYLIPQ8WY64 445 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 MRGPRX3Q96LB0 322 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 NKX2-4Q9H2Z4 354 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 CYP26B1Q9NR63 512 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 ZNF281Q9Y2X9 895 aa8.48□□□□□ -1.05
TM9SF3-204ENST00000475401 KCNJ6P48051 423 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 RASA3Q14644 834 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 CCDC144BQ3MJ40 725 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 ZPBP2Q6X784 338 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 CEP128Q6ZU80 1094 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 DPH6Q7L8W6 267 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 LILRA2Q8N149 483 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 BTN2A2Q8WVV5 523 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 LINC01599Q8WXQ3 324 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 IPO9Q96P70 1041 aaKnown RBP8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 ERVK13-1Q9NX77 482 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 PFDN2Q9UHV9 154 aa8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 CDK11AQ9UQ88 783 aaPredicted RBP8.47□□□□□ -1.05
TM9SF3-204ENST00000475401 A0A1W2PQ27 194 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 A0A1W2PQ64 194 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 A0A1W2PQC6 194 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 A0A1W2PQD8 194 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 A0A1W2PQU0 124 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 FGF10O15520 208 aaPredicted RBP8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 CPP00450 1065 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 SNRPB2P08579 225 aaKnown RBP8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 PPP2R2AP63151 447 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 SCRN1Q12765 414 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 CBLL1Q75N03 491 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 PTCHD1Q96NR3 888 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 AARSD1Q9BTE6 412 aaKnown RBP8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 SPATA9Q9BWV2 254 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 LGR4Q9BXB1 951 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 TAF6LQ9Y6J9 622 aa8.46□□□□□ -1.06
TM9SF3-204ENST00000475401 USP2O75604 605 aaPredicted RBP8.45□□□□□ -1.06
TM9SF3-204ENST00000475401 HPXP02790 462 aa8.45□□□□□ -1.06
TM9SF3-204ENST00000475401 JUNBP17275 347 aaPredicted RBP8.45□□□□□ -1.06
TM9SF3-204ENST00000475401 PAMP19021 973 aa8.45□□□□□ -1.06
TM9SF3-204ENST00000475401 RTP1P59025 263 aa8.45□□□□□ -1.06
TM9SF3-204ENST00000475401 ABHD4Q8TB40 342 aa8.45□□□□□ -1.06
TM9SF3-204ENST00000475401 KIRREL1Q96J84 757 aa8.45□□□□□ -1.06
TM9SF3-204ENST00000475401 HHIPL1Q96JK4 782 aa8.45□□□□□ -1.06
TM9SF3-204ENST00000475401 TRAV20A0A0B4J274 112 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms