RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 KLHL3Q9UH77 587 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 DDX41Q9UJV9 622 aaKnown RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 DBR1Q9UK59 544 aaKnown RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 ADAM30Q9UKF2 790 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 CNOT11Q9UKZ1 510 aaKnown RBP1.74□□□□□ -2.13
HDAC9-222ENST00000474742 TCFL5Q9UL49 500 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 TACC3Q9Y6A5 838 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 ADAMTS20P59510 1910 aa1.74□□□□□ -2.13
HDAC9-222ENST00000474742 ZNF536O15090 1300 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 SHISA3A0PJX4 238 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 IRS4O14654 1257 aaPredicted RBP1.73□□□□□ -2.13
HDAC9-222ENST00000474742 UBOX5O94941 541 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 SYPP08247 313 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 ACRP10323 421 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 RLBP1P12271 317 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 C6P13671 934 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 PRKCAP17252 672 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 TNFRSF1AP19438 455 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 GBP1P32455 592 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 ZNF76P36508 570 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 YBX1P67809 324 aaKnown RBP1.73□□□□□ -2.13
HDAC9-222ENST00000474742 ADAM17P78536 824 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 ZNF200P98182 395 aaPredicted RBP1.73□□□□□ -2.13
HDAC9-222ENST00000474742 KRTAP1-1Q07627 177 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 NMIQ13287 307 aaPredicted RBP1.73□□□□□ -2.13
HDAC9-222ENST00000474742 MPP2Q14168 576 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 SEZ6Q53EL9 994 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 SNAP47Q5SQN1 464 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 ZFYVE27Q5T4F4 411 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 CPZQ66K79 652 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 ZC3H14Q6PJT7 736 aaKnown RBP1.73□□□□□ -2.13
HDAC9-222ENST00000474742 HS2ST1Q7LGA3 356 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 USP48Q86UV5 1035 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 IGDCC3Q8IVU1 814 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 SLITRK4Q8IW52 837 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 ZFPM1Q8IX07 1006 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 ADGRG2Q8IZP9 1017 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 NUP43Q8NFH3 380 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 ENOX1Q8TC92 643 aaKnown RBP1.73□□□□□ -2.13
HDAC9-222ENST00000474742 KISS1RQ969F8 398 aaPredicted RBP1.73□□□□□ -2.13
HDAC9-222ENST00000474742 MAP6Q96JE9 813 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 CCDC74BQ96LY2 380 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 KREMEN1Q96MU8 473 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 MENTQ9BUN1 341 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 CDADC1Q9BWV3 514 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 NT5C1AQ9BXI3 368 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 ASPNQ9BXN1 380 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 EHMT1Q9H9B1 1298 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 EPB41L4AQ9HCS5 686 aaPredicted RBP1.73□□□□□ -2.13
HDAC9-222ENST00000474742 KLHL14Q9P2G3 628 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 EBF1Q9UH73 591 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 PCDHB14Q9Y5E9 798 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 PMF1-BGLAPU3KQ54 211 aa1.73□□□□□ -2.13
HDAC9-222ENST00000474742 A0A1B0GTL3 188 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 NOTOA8MTQ0 251 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 MEIS1O00470 390 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 FFAR3O14843 346 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 MATN3O15232 486 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 EFEMP2O95967 443 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 ENDOUP21128 410 aaKnown RBP1.72□□□□□ -2.13
HDAC9-222ENST00000474742 ERVFRD-1P60508 538 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 RNF4P78317 190 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 SNW1Q13573 536 aaKnown RBP1.72□□□□□ -2.13
HDAC9-222ENST00000474742 MLECQ14165 292 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 NR1I3Q14994 352 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 ZYXQ15942 572 aaKnown RBP1.72□□□□□ -2.13
HDAC9-222ENST00000474742 HSF5Q4G112 596 aaPredicted RBP1.72□□□□□ -2.13
HDAC9-222ENST00000474742 ARSHQ5FYA8 562 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 OVOS1Q6IE37 1185 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 LIPIQ6XZB0 460 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 RUFY4Q6ZNE9 571 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 NT5DC4Q86YG4 428 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 JAMLQ86YT9 394 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 TMEM192Q8IY95 271 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 SLFN12Q8IYM2 578 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 NAT16Q8N8M0 369 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 TP53I13Q8NBR0 393 aaPredicted RBP1.72□□□□□ -2.13
HDAC9-222ENST00000474742 SYTL5Q8TDW5 730 aaPredicted RBP1.72□□□□□ -2.13
HDAC9-222ENST00000474742 SH3RF3Q8TEJ3 882 aaPredicted RBP1.72□□□□□ -2.13
HDAC9-222ENST00000474742 RNF34Q969K3 372 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 ATG4CQ96DT6 458 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 HHIPL1Q96JK4 782 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 C8orf49Q96NF6 230 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 KIF2CQ99661 725 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 SPON2Q9BUD6 331 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 G6PC3Q9BUM1 346 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 SLITRK6Q9H5Y7 841 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 METTL5Q9NRN9 209 aaKnown RBP1.72□□□□□ -2.13
HDAC9-222ENST00000474742 IGSF5Q9NSI5 407 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 TNFRSF10DQ9UBN6 386 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 MINPP1Q9UNW1 487 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 GPR55Q9Y2T6 319 aaPredicted RBP1.72□□□□□ -2.13
HDAC9-222ENST00000474742 SUPT16HQ9Y5B9 1047 aaKnown RBP1.72□□□□□ -2.13
HDAC9-222ENST00000474742 PCDHA5Q9Y5H7 936 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 ROBO2Q9HCK4 1378 aa1.72□□□□□ -2.13
HDAC9-222ENST00000474742 MEIS3P2A8K0S8 358 aa1.71□□□□□ -2.14
HDAC9-222ENST00000474742 SCAMP3O14828 347 aaKnown RBP1.71□□□□□ -2.14
HDAC9-222ENST00000474742 RGS13O14921 159 aa1.71□□□□□ -2.14
HDAC9-222ENST00000474742 SHOXO15266 292 aa1.71□□□□□ -2.14
HDAC9-222ENST00000474742 MSL3P1P0C860 447 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms