RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 CA12O43570 354 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 NCLP19338 710 aaKnown RBP23.42■■□□□ 1.34
CDHR3-210ENST00000474330 CALML3P27482 149 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 KRT2P35908 639 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 TM4SF4P48230 202 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 USP14P54578 494 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 NPY5RQ15761 445 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 FAM83BQ5T0W9 1011 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 MYSM1Q5VVJ2 828 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 TYW1BQ6NUM6 668 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 TMEM87AQ8NBN3 555 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 ZNF396Q96N95 335 aaPredicted RBP23.42■■□□□ 1.34
CDHR3-210ENST00000474330 BRMS1Q9HCU9 246 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 RNF186Q9NXI6 227 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.42■■□□□ 1.34
CDHR3-210ENST00000474330 CFAP45Q9UL16 551 aa23.42■■□□□ 1.34
CDHR3-210ENST00000474330 GJA5P36382 358 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 STAT2P52630 851 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 SPP2Q13103 211 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 SYDE2Q5VT97 1194 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 GALNT17Q6IS24 598 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 NOSTRINQ8IVI9 506 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 REM2Q8IYK8 340 aaPredicted RBP23.41■■□□□ 1.34
CDHR3-210ENST00000474330 CCDC12Q8WUD4 166 aaPredicted RBP23.41■■□□□ 1.34
CDHR3-210ENST00000474330 LMBRD1Q9NUN5 540 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 ZHX2Q9Y6X8 837 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 CASP8AP2Q9UKL3 1982 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 BACE1P56817 501 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 CSPP1Q1MSJ5 1256 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 OXER1Q8TDS5 423 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 CHURC1Q8WUH1 139 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 WNK4Q96J92 1243 aa23.41■■□□□ 1.34
CDHR3-210ENST00000474330 SCAND2PQ9GZW5 306 aaPredicted RBP23.41■■□□□ 1.34
CDHR3-210ENST00000474330 TFIP11Q9UBB9 837 aaKnown RBP23.41■■□□□ 1.34
CDHR3-210ENST00000474330 WDR46O15213 610 aaKnown RBP23.4■■□□□ 1.34
CDHR3-210ENST00000474330 PRPF40AO75400 957 aaKnown RBP23.4■■□□□ 1.34
CDHR3-210ENST00000474330 IKQ13123 557 aaPredicted RBP23.4■■□□□ 1.34
CDHR3-210ENST00000474330 MTMR2Q13614 643 aa23.4■■□□□ 1.34
CDHR3-210ENST00000474330 FAM160B2Q86V87 743 aa23.4■■□□□ 1.34
CDHR3-210ENST00000474330 ZMYND12Q9H0C1 365 aa23.4■■□□□ 1.34
CDHR3-210ENST00000474330 ELP3Q9H9T3 547 aa23.4■■□□□ 1.34
CDHR3-210ENST00000474330 GDPD2Q9HCC8 539 aa23.4■■□□□ 1.34
CDHR3-210ENST00000474330 C19orf81C9J6K1 198 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 FIBPO43427 364 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 TRPA1O75762 1119 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 NAPAP54920 295 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 NR5A1Q13285 461 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 DAGLBQ8NCG7 672 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 EMILIN3Q9NT22 766 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 SAGE1Q9NXZ1 904 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 FEM1BQ9UK73 627 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 PRR12Q9ULL5 1215 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 PCDHA4Q9UN74 947 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 AFG3L2Q9Y4W6 797 aa23.39■■□□□ 1.33
CDHR3-210ENST00000474330 ESYT2A0FGR8 921 aa23.38■■□□□ 1.33
CDHR3-210ENST00000474330 PPP1R11O60927 126 aaPredicted RBP23.38■■□□□ 1.33
CDHR3-210ENST00000474330 ZBTB48P10074 688 aaPredicted RBP23.38■■□□□ 1.33
CDHR3-210ENST00000474330 CDC37Q16543 378 aaPredicted RBP23.38■■□□□ 1.33
CDHR3-210ENST00000474330 QRICH1Q2TAL8 776 aa23.38■■□□□ 1.33
CDHR3-210ENST00000474330 BLIDQ8IZY5 108 aa23.38■■□□□ 1.33
CDHR3-210ENST00000474330 CNKSR2Q8WXI2 1034 aa23.38■■□□□ 1.33
CDHR3-210ENST00000474330 TNFRSF25Q93038 417 aa23.38■■□□□ 1.33
CDHR3-210ENST00000474330 C12orf42Q96LP6 360 aa23.38■■□□□ 1.33
CDHR3-210ENST00000474330 USP28Q96RU2 1077 aa23.38■■□□□ 1.33
CDHR3-210ENST00000474330 PPP1R18Q6NYC8 613 aa23.37■■□□□ 1.33
CDHR3-210ENST00000474330 ERO1BQ86YB8 467 aa23.37■■□□□ 1.33
CDHR3-210ENST00000474330 ELP1O95163 1332 aa23.37■■□□□ 1.33
CDHR3-210ENST00000474330 SPDYE5A6NIY4 337 aa23.37■■□□□ 1.33
CDHR3-210ENST00000474330 GNA11P29992 359 aa23.37■■□□□ 1.33
CDHR3-210ENST00000474330 PPATQ06203 517 aa23.37■■□□□ 1.33
CDHR3-210ENST00000474330 COA7Q96BR5 231 aa23.37■■□□□ 1.33
CDHR3-210ENST00000474330 OPTNQ96CV9 577 aa23.37■■□□□ 1.33
CDHR3-210ENST00000474330 C6orf50Q9HD87 102 aa23.37■■□□□ 1.33
CDHR3-210ENST00000474330 SMCO2A6NFE2 343 aa23.36■■□□□ 1.33
CDHR3-210ENST00000474330 TRIM75PA6NK02 468 aa23.36■■□□□ 1.33
CDHR3-210ENST00000474330 M0R2N6 131 aa23.36■■□□□ 1.33
CDHR3-210ENST00000474330 LEO1Q8WVC0 666 aaPredicted RBP23.36■■□□□ 1.33
CDHR3-210ENST00000474330 POLR3EQ9NVU0 708 aa23.36■■□□□ 1.33
CDHR3-210ENST00000474330 RTEL1Q9NZ71 1219 aa23.36■■□□□ 1.33
CDHR3-210ENST00000474330 VCAM1P19320 739 aa23.35■■□□□ 1.33
CDHR3-210ENST00000474330 RILPL1Q5EBL4 403 aa23.35■■□□□ 1.33
CDHR3-210ENST00000474330 OTUD5Q96G74 571 aa23.35■■□□□ 1.33
CDHR3-210ENST00000474330 SPATA32Q96LK8 384 aa23.35■■□□□ 1.33
CDHR3-210ENST00000474330 RCOR1Q9UKL0 485 aa23.35■■□□□ 1.33
CDHR3-210ENST00000474330 DGKZQ13574 1117 aa23.34■■□□□ 1.33
CDHR3-210ENST00000474330 SKOR2Q2VWA4 1001 aaPredicted RBP23.34■■□□□ 1.33
CDHR3-210ENST00000474330 SH3D19Q5HYK7 790 aa23.34■■□□□ 1.33
CDHR3-210ENST00000474330 AMNQ9BXJ7 453 aa23.34■■□□□ 1.33
CDHR3-210ENST00000474330 RANBP17Q9H2T7 1088 aaKnown RBP23.34■■□□□ 1.33
CDHR3-210ENST00000474330 LOC285556D6RIA3 1793 aa23.34■■□□□ 1.33
CDHR3-210ENST00000474330 ADAMTS3O15072 1205 aa23.33■■□□□ 1.33
CDHR3-210ENST00000474330 SREBF2Q12772 1141 aa23.33■■□□□ 1.33
CDHR3-210ENST00000474330 PPIL2Q13356 520 aa23.33■■□□□ 1.33
CDHR3-210ENST00000474330 FBXO11Q86XK2 927 aa23.33■■□□□ 1.33
CDHR3-210ENST00000474330 PRPF38AQ8NAV1 312 aaKnown RBP23.33■■□□□ 1.33
CDHR3-210ENST00000474330 KIFC2Q96AC6 838 aa23.33■■□□□ 1.33
CDHR3-210ENST00000474330 FTOQ9C0B1 505 aaKnown RBP eCLIP23.33■■□□□ 1.33
CDHR3-210ENST00000474330 FBXO28Q9NVF7 368 aa23.33■■□□□ 1.33
CDHR3-210ENST00000474330 MANSC4A6NHS7 340 aaPredicted RBP23.33■■□□□ 1.32
CDHR3-210ENST00000474330 TRAK2O60296 914 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms