RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 PRDM7Q9NQW5 492 aa7.05□□□□□ -1.28
CDHR3-208ENST00000471910 TMEM59LQ9UK28 342 aa7.05□□□□□ -1.28
CDHR3-208ENST00000471910 SSRP1Q08945 709 aaKnown RBP7.04□□□□□ -1.28
CDHR3-208ENST00000471910 ZNF227Q86WZ6 799 aa7.04□□□□□ -1.28
CDHR3-208ENST00000471910 SPPL2CQ8IUH8 684 aa7.04□□□□□ -1.28
CDHR3-208ENST00000471910 OXR1Q8N573 874 aa7.04□□□□□ -1.28
CDHR3-208ENST00000471910 NAT16Q8N8M0 369 aa7.04□□□□□ -1.28
CDHR3-208ENST00000471910 MRGPRX3Q96LB0 322 aa7.04□□□□□ -1.28
CDHR3-208ENST00000471910 CCDC140Q96MF4 163 aa7.04□□□□□ -1.28
CDHR3-208ENST00000471910 FCRL3Q96P31 734 aaPredicted RBP7.04□□□□□ -1.28
CDHR3-208ENST00000471910 ADAMTS10Q9H324 1103 aa7.04□□□□□ -1.28
CDHR3-208ENST00000471910 RC3H2Q9HBD1 1191 aaKnown RBP7.04□□□□□ -1.28
CDHR3-208ENST00000471910 MBNL3Q9NUK0 354 aaKnown RBP7.04□□□□□ -1.28
CDHR3-208ENST00000471910 GPR55Q9Y2T6 319 aaPredicted RBP7.04□□□□□ -1.28
CDHR3-208ENST00000471910 DNAJC25-GNG10A0A024R161 153 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 A0A1W2PQU0 124 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 AURKAO14965 403 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 RNASE1P07998 156 aaKnown RBP7.03□□□□□ -1.28
CDHR3-208ENST00000471910 RAC2P15153 192 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 HOXC12P31275 282 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 SEPHS1P49903 392 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 RALGPS1Q5JS13 557 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 GTF2IRD2BQ6EKJ0 949 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 GTF2IRD2Q86UP8 949 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 KSR1Q8IVT5 923 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 ABI1Q8IZP0 508 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 FCRL2Q96LA5 508 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-208ENST00000471910 IPO9Q96P70 1041 aaKnown RBP7.03□□□□□ -1.28
CDHR3-208ENST00000471910 SPATA9Q9BWV2 254 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 CYP26B1Q9NR63 512 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 AP5S1Q9NUS5 200 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 BACE2Q9Y5Z0 518 aa7.03□□□□□ -1.28
CDHR3-208ENST00000471910 FAM221BA6H8Z2 402 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 C2orf71A6NGG8 1288 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 STXBP3O00186 592 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 TBC1D8O95759 1140 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 CPP00450 1065 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 ZGLP1P0C6A0 271 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 GDNFP39905 211 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 HK2P52789 917 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 PPP2R2AP63151 447 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 CHRNEQ04844 493 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 EEF1DP3Q658K8 133 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 SPATC1Q76KD6 591 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 ANKS4BQ8N8V4 417 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 PDZD8Q8NEN9 1154 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 DNAJC7Q99615 494 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 TNFRSF10DQ9UBN6 386 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 PFDN2Q9UHV9 154 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 ZNF281Q9Y2X9 895 aa7.02□□□□□ -1.29
CDHR3-208ENST00000471910 OAS3Q9Y6K5 1087 aaKnown RBP7.02□□□□□ -1.29
CDHR3-208ENST00000471910 KDM2BQ8NHM5 1336 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 TRBV23OR9-2A0A075B6M9 112 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 TMEM82A0PJX8 343 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 BIN1O00499 593 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 IFNGR1P15260 489 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 KIR2DL1P43626 348 aaPredicted RBP7.01□□□□□ -1.29
CDHR3-208ENST00000471910 KIR2DL2P43627 348 aaPredicted RBP7.01□□□□□ -1.29
CDHR3-208ENST00000471910 AFMP43652 599 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 KCNJ6P48051 423 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 SLC14A2Q15849 920 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 RTP2Q5QGT7 225 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 HLA-DQA1Q5Y7H0 255 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 RCSD1Q6JBY9 416 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 CYP2R1Q6VVX0 501 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 BTN2A2Q8WVV5 523 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 MAP6Q96JE9 813 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 AARSD1Q9BTE6 412 aaKnown RBP7.01□□□□□ -1.29
CDHR3-208ENST00000471910 LGR4Q9BXB1 951 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 NKX2-4Q9H2Z4 354 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 ADAMTS6Q9UKP5 1117 aa7.01□□□□□ -1.29
CDHR3-208ENST00000471910 TRAV20A0A0B4J274 112 aa7□□□□□ -1.29
CDHR3-208ENST00000471910 FITM1A5D6W6 292 aa7□□□□□ -1.29
CDHR3-208ENST00000471910 FGF10O15520 208 aaPredicted RBP7□□□□□ -1.29
CDHR3-208ENST00000471910 SNRPB2P08579 225 aaKnown RBP7□□□□□ -1.29
CDHR3-208ENST00000471910 RBM10P98175 930 aaKnown RBP7□□□□□ -1.29
CDHR3-208ENST00000471910 SCRN1Q12765 414 aa7□□□□□ -1.29
CDHR3-208ENST00000471910 ZPBP2Q6X784 338 aa7□□□□□ -1.29
CDHR3-208ENST00000471910 LINC01599Q8WXQ3 324 aa7□□□□□ -1.29
CDHR3-208ENST00000471910 PTCHD1Q96NR3 888 aa7□□□□□ -1.29
CDHR3-208ENST00000471910 PAMP19021 973 aa6.99□□□□□ -1.29
CDHR3-208ENST00000471910 IRAK1P51617 712 aa6.99□□□□□ -1.29
CDHR3-208ENST00000471910 LONRF2Q1L5Z9 754 aa6.99□□□□□ -1.29
CDHR3-208ENST00000471910 ZC3H12BQ5HYM0 836 aaKnown RBP6.99□□□□□ -1.29
CDHR3-208ENST00000471910 NOP9Q86U38 636 aaKnown RBP6.99□□□□□ -1.29
CDHR3-208ENST00000471910 JAMLQ86YT9 394 aa6.99□□□□□ -1.29
CDHR3-208ENST00000471910 KCTD13Q8WZ19 329 aa6.99□□□□□ -1.29
CDHR3-208ENST00000471910 CDC6Q99741 560 aa6.99□□□□□ -1.29
CDHR3-208ENST00000471910 MCMBPQ9BTE3 642 aa6.99□□□□□ -1.29
CDHR3-208ENST00000471910 ERVK13-1Q9NX77 482 aa6.99□□□□□ -1.29
CDHR3-208ENST00000471910 CTNND2Q9UQB3 1225 aa6.99□□□□□ -1.29
CDHR3-208ENST00000471910 A0A1W2PQ27 194 aa6.98□□□□□ -1.29
CDHR3-208ENST00000471910 A0A1W2PQ64 194 aa6.98□□□□□ -1.29
CDHR3-208ENST00000471910 A0A1W2PQC6 194 aa6.98□□□□□ -1.29
CDHR3-208ENST00000471910 A0A1W2PQD8 194 aa6.98□□□□□ -1.29
CDHR3-208ENST00000471910 TBX1O43435 398 aa6.98□□□□□ -1.29
CDHR3-208ENST00000471910 IGSF3O75054 1194 aa6.98□□□□□ -1.29
CDHR3-208ENST00000471910 HPXP02790 462 aa6.98□□□□□ -1.29
CDHR3-208ENST00000471910 ECI1P42126 302 aa6.98□□□□□ -1.29
CDHR3-208ENST00000471910 IQCEQ6IPM2 695 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms