RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 CAP1Q01518 475 aa3.56□□□□□ -1.84
COMMD3-209ENST00000471350 MVKQ03426 396 aa3.56□□□□□ -1.84
COMMD3-209ENST00000471350 VWA3BQ502W6 1294 aa3.56□□□□□ -1.84
COMMD3-209ENST00000471350 RPTNQ6XPR3 784 aa3.56□□□□□ -1.84
COMMD3-209ENST00000471350 NLRC3Q7RTR2 1065 aa3.56□□□□□ -1.84
COMMD3-209ENST00000471350 REXO1Q8N1G1 1221 aaKnown RBP3.56□□□□□ -1.84
COMMD3-209ENST00000471350 LINC01356Q8N9X3 169 aa3.56□□□□□ -1.84
COMMD3-209ENST00000471350 ZNF296Q8WUU4 475 aaPredicted RBP3.56□□□□□ -1.84
COMMD3-209ENST00000471350 DHRS1Q96LJ7 313 aa3.56□□□□□ -1.84
COMMD3-209ENST00000471350 JMJD8Q96S16 334 aa3.56□□□□□ -1.84
COMMD3-209ENST00000471350 MKRN2Q9H000 416 aaKnown RBP3.56□□□□□ -1.84
COMMD3-209ENST00000471350 GZF1Q9H116 711 aaPredicted RBP3.56□□□□□ -1.84
COMMD3-209ENST00000471350 LUC7LQ9NQ29 371 aaKnown RBP3.56□□□□□ -1.84
COMMD3-209ENST00000471350 CHST7Q9NS84 486 aa3.56□□□□□ -1.84
COMMD3-209ENST00000471350 FBXL21Q9UKT6 434 aa3.56□□□□□ -1.84
COMMD3-209ENST00000471350 A0A1W2PQ27 194 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 A0A1W2PQ64 194 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 A0A1W2PQC6 194 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 A0A1W2PQD8 194 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 WTIPA6NIX2 430 aaPredicted RBP3.55□□□□□ -1.84
COMMD3-209ENST00000471350 PLA2G1BP04054 148 aaKnown RBP3.55□□□□□ -1.84
COMMD3-209ENST00000471350 MPOP05164 745 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 VAV1P15498 845 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 NCKAP1LP55160 1127 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 EFEMP1Q12805 493 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 PLEKHN1Q494U1 663 aaPredicted RBP3.55□□□□□ -1.84
COMMD3-209ENST00000471350 SEZ6Q53EL9 994 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 GALNT18Q6P9A2 607 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 CNKSR3Q6P9H4 555 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 CRTC3Q6UUV7 619 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 GK5Q6ZS86 529 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 TMC6Q7Z403 805 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 NKD1Q969G9 470 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 SLC9A7Q96T83 725 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 ADAM7Q9H2U9 754 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 AP5S1Q9NUS5 200 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 GFOD1Q9NXC2 390 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 UBP1Q9NZI7 540 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 PCDHB12Q9Y5F1 795 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 HCFC2Q9Y5Z7 792 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 TAF6LQ9Y6J9 622 aa3.55□□□□□ -1.84
COMMD3-209ENST00000471350 A0A1W2PQ45 241 aaPredicted RBP3.54□□□□□ -1.84
COMMD3-209ENST00000471350 A0A1W2PQY0 241 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 C9IYK1 514 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 PRICKLE3O43900 615 aaPredicted RBP3.54□□□□□ -1.84
COMMD3-209ENST00000471350 IMPDH2P12268 514 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 PRKCAP17252 672 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 DLX2Q07687 328 aaPredicted RBP3.54□□□□□ -1.84
COMMD3-209ENST00000471350 LAPTM5Q13571 262 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 MRPL58Q14197 206 aaKnown RBP3.54□□□□□ -1.84
COMMD3-209ENST00000471350 ERICH6BQ5W0A0 696 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 ZDHHC14Q8IZN3 488 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 GIPC2Q8TF65 315 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 TEPSINQ96N21 525 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 SLC6A18Q96N87 628 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 SLC12A9Q9BXP2 914 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 PRR13Q9NZ81 148 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 IMPACTQ9P2X3 320 aa3.54□□□□□ -1.84
COMMD3-209ENST00000471350 A0A1W2PQJ5 194 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 MEIS1O00470 390 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 BUB1BO60566 1050 aaPredicted RBP3.53□□□□□ -1.84
COMMD3-209ENST00000471350 SASH1O94885 1247 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 HTRA3P83110 453 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 AUHQ13825 339 aaKnown RBP3.53□□□□□ -1.84
COMMD3-209ENST00000471350 CWF19L1Q69YN2 538 aaKnown RBP3.53□□□□□ -1.84
COMMD3-209ENST00000471350 PPFIBP1Q86W92 1011 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 KIAA0825Q8IV33 1275 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 SLITRK4Q8IW52 837 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 NAT16Q8N8M0 369 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 RGS22Q8NE09 1264 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 EAF1Q96JC9 268 aaPredicted RBP3.53□□□□□ -1.84
COMMD3-209ENST00000471350 PWWP2AQ96N64 755 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 DSCC1Q9BVC3 393 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 CDADC1Q9BWV3 514 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 NT5C1AQ9BXI3 368 aa3.53□□□□□ -1.84
COMMD3-209ENST00000471350 SRRTQ9BXP5 876 aaKnown RBP3.53□□□□□ -1.84
COMMD3-209ENST00000471350 NUDT19A8MXV4 375 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 CELA3BP08861 270 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 DBHP09172 617 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 ATF2P15336 505 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 LIMS1P48059 325 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 RBM10P98175 930 aaKnown RBP3.52□□□□□ -1.85
COMMD3-209ENST00000471350 CYP4F8P98187 520 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 RAB3GAP1Q15042 981 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 NOL9Q5SY16 702 aaKnown RBP3.52□□□□□ -1.85
COMMD3-209ENST00000471350 INTS3Q68E01 1043 aaKnown RBP3.52□□□□□ -1.85
COMMD3-209ENST00000471350 FRMD5Q7Z6J6 570 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 PRRT2Q7Z6L0 340 aaPredicted RBP3.52□□□□□ -1.85
COMMD3-209ENST00000471350 SP8Q8IXZ3 490 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 CCDC144CPQ8IYA2 1237 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 TMEM87AQ8NBN3 555 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 NUP43Q8NFH3 380 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 SMARCC1Q92922 1105 aaPredicted RBP3.52□□□□□ -1.85
COMMD3-209ENST00000471350 FERD3LQ96RJ6 166 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 SPON2Q9BUD6 331 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 FBLN5Q9UBX5 448 aa3.52□□□□□ -1.85
COMMD3-209ENST00000471350 ZC3H12DA2A288 527 aaKnown RBP3.51□□□□□ -1.85
COMMD3-209ENST00000471350 H0Y8X5 98 aa3.51□□□□□ -1.85
COMMD3-209ENST00000471350 FGF10O15520 208 aaPredicted RBP3.51□□□□□ -1.85
COMMD3-209ENST00000471350 SRGAP3O43295 1099 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms