RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 CDC37Q16543 378 aaPredicted RBP29.66■■■□□ 2.34
U2AF1-208ENST00000471250 MAP3K11Q16584 847 aa29.66■■■□□ 2.34
U2AF1-208ENST00000471250 RBM43Q6ZSC3 357 aaKnown RBP29.66■■■□□ 2.34
U2AF1-208ENST00000471250 SPICE1Q8N0Z3 855 aa29.66■■■□□ 2.34
U2AF1-208ENST00000471250 TSPY26PQ9H489 355 aa29.66■■■□□ 2.34
U2AF1-208ENST00000471250 ZNF112Q9UJU3 913 aa29.66■■■□□ 2.34
U2AF1-208ENST00000471250 CAMK4Q16566 473 aa29.66■■■□□ 2.34
U2AF1-208ENST00000471250 RESP18Q5W5W9 173 aa29.66■■■□□ 2.34
U2AF1-208ENST00000471250 PFKFB1P16118 471 aa29.65■■■□□ 2.34
U2AF1-208ENST00000471250 ZNF579Q8NAF0 562 aaKnown RBP29.65■■■□□ 2.34
U2AF1-208ENST00000471250 GLIS2Q9BZE0 524 aaPredicted RBP29.65■■■□□ 2.34
U2AF1-208ENST00000471250 HPSEQ9Y251 543 aa29.65■■■□□ 2.34
U2AF1-208ENST00000471250 KINO60870 393 aaKnown RBP29.64■■■□□ 2.34
U2AF1-208ENST00000471250 IKQ13123 557 aaPredicted RBP29.64■■■□□ 2.34
U2AF1-208ENST00000471250 FUCA2Q9BTY2 467 aa29.64■■■□□ 2.34
U2AF1-208ENST00000471250 RIC8AQ9NPQ8 531 aa29.64■■■□□ 2.34
U2AF1-208ENST00000471250 CTAGE5O15320 804 aa29.63■■■□□ 2.33
U2AF1-208ENST00000471250 ATP2C1P98194 919 aaPredicted RBP29.63■■■□□ 2.33
U2AF1-208ENST00000471250 DOCK1Q14185 1865 aa29.63■■■□□ 2.33
U2AF1-208ENST00000471250 NONOQ15233 471 aaKnown RBP eCLIP29.63■■■□□ 2.33
U2AF1-208ENST00000471250 FAM83BQ5T0W9 1011 aa29.63■■■□□ 2.33
U2AF1-208ENST00000471250 CCDC84Q86UT8 332 aaPredicted RBP29.63■■■□□ 2.33
U2AF1-208ENST00000471250 REXO1Q8N1G1 1221 aaKnown RBP29.63■■■□□ 2.33
U2AF1-208ENST00000471250 PLA2G6O60733 806 aa29.63■■■□□ 2.33
U2AF1-208ENST00000471250 INPP5BP32019 993 aa29.63■■■□□ 2.33
U2AF1-208ENST00000471250 PRAMEF18Q5VWM3 479 aa29.63■■■□□ 2.33
U2AF1-208ENST00000471250 MRVI1Q9Y6F6 885 aa29.63■■■□□ 2.33
U2AF1-208ENST00000471250 STAT2P52630 851 aa29.62■■■□□ 2.33
U2AF1-208ENST00000471250 GPR162Q16538 588 aa29.62■■■□□ 2.33
U2AF1-208ENST00000471250 INF2Q27J81 1249 aa29.62■■■□□ 2.33
U2AF1-208ENST00000471250 DPY19L2Q6NUT2 758 aa29.62■■■□□ 2.33
U2AF1-208ENST00000471250 FERMT2Q96AC1 680 aa29.62■■■□□ 2.33
U2AF1-208ENST00000471250 RBSNQ9H1K0 784 aa29.62■■■□□ 2.33
U2AF1-208ENST00000471250 BIN2Q9UBW5 565 aaPredicted RBP29.62■■■□□ 2.33
U2AF1-208ENST00000471250 PRR12Q9ULL5 1215 aa29.62■■■□□ 2.33
U2AF1-208ENST00000471250 POLR2AP24928 1970 aaKnown RBP29.62■■■□□ 2.33
U2AF1-208ENST00000471250 GRIN1Q05586 938 aa29.61■■■□□ 2.33
U2AF1-208ENST00000471250 PTGDRQ13258 359 aa29.61■■■□□ 2.33
U2AF1-208ENST00000471250 ZYXQ15942 572 aaKnown RBP29.61■■■□□ 2.33
U2AF1-208ENST00000471250 L3MBTL3Q96JM7 780 aaPredicted RBP29.61■■■□□ 2.33
U2AF1-208ENST00000471250 ZNF202O95125 648 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 XRCC6P12956 609 aaKnown RBP eCLIP29.6■■■□□ 2.33
U2AF1-208ENST00000471250 SCYL3Q8IZE3 742 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 CHURC1Q8WUH1 139 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 AMNQ9BXJ7 453 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 GLT8D2Q9H1C3 349 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 PCDHA1Q9Y5I3 950 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 MCM7P33993 719 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 CLK2P49760 499 aaKnown RBP29.6■■■□□ 2.33
U2AF1-208ENST00000471250 MRPL12P52815 198 aaKnown RBP29.6■■■□□ 2.33
U2AF1-208ENST00000471250 SUPT20HL1Q3ZLR7 823 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 JAKMIP3Q5VZ66 844 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 FAM160B2Q86V87 743 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 CUL5Q93034 780 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 FEZ1Q99689 392 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 KIAA1683Q9H0B3 1180 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 TMEM260Q9NX78 707 aa29.6■■■□□ 2.33
U2AF1-208ENST00000471250 SYKP43405 635 aa29.59■■■□□ 2.33
U2AF1-208ENST00000471250 FBXO11Q86XK2 927 aa29.59■■■□□ 2.33
U2AF1-208ENST00000471250 CKAP2LQ8IYA6 745 aa29.59■■■□□ 2.33
U2AF1-208ENST00000471250 C4orf32Q8N8J7 132 aa29.59■■■□□ 2.33
U2AF1-208ENST00000471250 TIGD1Q96MW7 591 aa29.59■■■□□ 2.33
U2AF1-208ENST00000471250 FEM1BQ9UK73 627 aa29.59■■■□□ 2.33
U2AF1-208ENST00000471250 ZC3H4Q9UPT8 1303 aaKnown RBP29.58■■■□□ 2.33
U2AF1-208ENST00000471250 SSC5DA1L4H1 1573 aa29.58■■■□□ 2.33
U2AF1-208ENST00000471250 SNAP25P60880 206 aa29.58■■■□□ 2.33
U2AF1-208ENST00000471250 WRNIP1Q96S55 665 aa29.58■■■□□ 2.33
U2AF1-208ENST00000471250 CSRNP2Q9H175 543 aa29.58■■■□□ 2.33
U2AF1-208ENST00000471250 PSTPIP2Q9H939 334 aa29.58■■■□□ 2.33
U2AF1-208ENST00000471250 FAM13BQ9NYF5 915 aa29.58■■■□□ 2.33
U2AF1-208ENST00000471250 GRIN3BO60391 1043 aa29.56■■■□□ 2.32
U2AF1-208ENST00000471250 CCDC192P0DO97 292 aa29.56■■■□□ 2.32
U2AF1-208ENST00000471250 ARL6IP4Q66PJ3 421 aaKnown RBP29.56■■■□□ 2.32
U2AF1-208ENST00000471250 NEK8Q86SG6 692 aa29.56■■■□□ 2.32
U2AF1-208ENST00000471250 LPAR1Q92633 364 aa29.56■■■□□ 2.32
U2AF1-208ENST00000471250 DCPSQ96C86 337 aaKnown RBP29.56■■■□□ 2.32
U2AF1-208ENST00000471250 WDR18Q9BV38 432 aa29.56■■■□□ 2.32
U2AF1-208ENST00000471250 KCNH3Q9ULD8 1083 aa29.56■■■□□ 2.32
U2AF1-208ENST00000471250 SPECC1Q5M775 1068 aa29.56■■■□□ 2.32
U2AF1-208ENST00000471250 TBCKQ8TEA7 893 aa29.56■■■□□ 2.32
U2AF1-208ENST00000471250 KLRG1Q96E93 195 aa29.56■■■□□ 2.32
U2AF1-208ENST00000471250 SDF4Q9BRK5 362 aa29.55■■■□□ 2.32
U2AF1-208ENST00000471250 RANBP17Q9H2T7 1088 aaKnown RBP29.55■■■□□ 2.32
U2AF1-208ENST00000471250 WDR46O15213 610 aaKnown RBP29.54■■■□□ 2.32
U2AF1-208ENST00000471250 TRAF1Q13077 416 aa29.54■■■□□ 2.32
U2AF1-208ENST00000471250 ORC2Q13416 577 aaPredicted RBP29.54■■■□□ 2.32
U2AF1-208ENST00000471250 UBE2SQ16763 222 aa29.54■■■□□ 2.32
U2AF1-208ENST00000471250 USP50Q70EL3 339 aaPredicted RBP29.54■■■□□ 2.32
U2AF1-208ENST00000471250 ZKSCAN4Q969J2 545 aaPredicted RBP29.54■■■□□ 2.32
U2AF1-208ENST00000471250 AS3MTQ9HBK9 375 aa29.54■■■□□ 2.32
U2AF1-208ENST00000471250 PICK1Q9NRD5 415 aa29.54■■■□□ 2.32
U2AF1-208ENST00000471250 PTPRAP18433 802 aa29.53■■■□□ 2.32
U2AF1-208ENST00000471250 TYRO3Q06418 890 aa29.53■■■□□ 2.32
U2AF1-208ENST00000471250 NOL9Q5SY16 702 aaKnown RBP29.53■■■□□ 2.32
U2AF1-208ENST00000471250 LAD1O00515 517 aa29.53■■■□□ 2.32
U2AF1-208ENST00000471250 LETM2Q2VYF4 491 aa29.53■■■□□ 2.32
U2AF1-208ENST00000471250 SULF1Q8IWU6 871 aa29.53■■■□□ 2.32
U2AF1-208ENST00000471250 KIFC2Q96AC6 838 aa29.53■■■□□ 2.32
U2AF1-208ENST00000471250 FZD1Q9UP38 647 aa29.53■■■□□ 2.32
U2AF1-208ENST00000471250 GLTPD2A6NH11 291 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms