RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 CWC22Q9HCG8 908 aaKnown RBP13.02□□□□□ -0.33
SREBF1-209ENST00000470247 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.33
SREBF1-209ENST00000470247 PARP14Q460N5 1801 aa13.02□□□□□ -0.33
SREBF1-209ENST00000470247 STXBP3O00186 592 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 PEX10O60683 326 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 HSP90AA1P07900 732 aaKnown RBP13.01□□□□□ -0.33
SREBF1-209ENST00000470247 FDX1P10109 184 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 CYP2C8P10632 490 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 OSBPP22059 807 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 C1QTNF8P60827 252 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 HERVK_113P62684 666 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 AKAP17AQ02040 695 aaKnown RBP13.01□□□□□ -0.33
SREBF1-209ENST00000470247 NOGQ13253 232 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 PABPC4Q13310 644 aaKnown RBP eCLIP13.01□□□□□ -0.33
SREBF1-209ENST00000470247 TMEM132BQ14DG7 1078 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 OTUD7BQ6GQQ9 843 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-209ENST00000470247 IFNL1Q8IU54 200 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 GPKOWQ92917 476 aaPredicted RBP eCLIP13.01□□□□□ -0.33
SREBF1-209ENST00000470247 COA7Q96BR5 231 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 BTBD7Q9P203 1132 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 RBPJLQ9UBG7 517 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 ZNF214Q9UL59 606 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-209ENST00000470247 SMCHD1A6NHR9 2005 aa13.01□□□□□ -0.33
SREBF1-209ENST00000470247 ADGRA2Q96PE1 1338 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 WDR33Q9C0J8 1336 aaKnown RBP13□□□□□ -0.33
SREBF1-209ENST00000470247 ATP2A1O14983 1001 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 ADAMTS3O15072 1205 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 SYT1P21579 422 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 VEGFBP49765 207 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 IRX3P78415 501 aaPredicted RBP13□□□□□ -0.33
SREBF1-209ENST00000470247 NPY5RQ15761 445 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 LARP1BQ659C4 914 aaKnown RBP13□□□□□ -0.33
SREBF1-209ENST00000470247 CCDC174Q6PII3 467 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
SREBF1-209ENST00000470247 FBXO18Q8NFZ0 1043 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 AGBL1Q96MI9 1066 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 RAVER2Q9HCJ3 691 aaKnown RBP13□□□□□ -0.33
SREBF1-209ENST00000470247 TXNRD2Q9NNW7 524 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 ZCCHC17Q9NP64 241 aaKnown RBP13□□□□□ -0.33
SREBF1-209ENST00000470247 BARHL2Q9NY43 387 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 VPS54Q9P1Q0 977 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 RIPK3Q9Y572 518 aa13□□□□□ -0.33
SREBF1-209ENST00000470247 OPLAHO14841 1288 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 ZBED4O75132 1171 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 ICAM1P05362 532 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 HSPA6P17066 643 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 FOSBP53539 338 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 GRM1Q13255 1194 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 PKP1Q13835 747 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 Q3C1V9 767 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 KRT40Q6A162 431 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 HEATR3Q7Z4Q2 680 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 FBXO11Q86XK2 927 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 FAM184AQ8NB25 1140 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 RGS22Q8NE09 1264 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 WASF1Q92558 559 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 AMNQ9BXJ7 453 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 R3HDMLQ9H3Y0 253 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 SH3GLB2Q9NR46 395 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
SREBF1-209ENST00000470247 ZDHHC9Q9Y397 364 aa12.99□□□□□ -0.33
SREBF1-209ENST00000470247 OAZ1P54368 228 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 GUCY1B3Q02153 619 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 SREBF2Q12772 1141 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 CPXCR1Q8N123 301 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 MB21D1Q8N884 522 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 CLEC4DQ8WXI8 215 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 PHF20Q9BVI0 1012 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 ZMYND12Q9H0C1 365 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 DAXXQ9UER7 740 aaPredicted RBP12.98□□□□□ -0.33
SREBF1-209ENST00000470247 PNMA3Q9UL41 463 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 MTMR6Q9Y217 621 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 RABGAP1Q9Y3P9 1069 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 PCDHA1Q9Y5I3 950 aa12.98□□□□□ -0.33
SREBF1-209ENST00000470247 ESYT2A0FGR8 921 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 hCG_1984214I3L0E3 225 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 STX6O43752 255 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 MAP2K2P36507 400 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 STAT3P40763 770 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 USH1GQ495M9 461 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 FAM177A1Q8N128 213 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-209ENST00000470247 ZNF713Q8N859 430 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-209ENST00000470247 TBC1D5Q92609 795 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 MORF4L1Q9UBU8 362 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 CCPG1Q9ULG6 757 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 KIF3AQ9Y496 699 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 MYH6P13533 1939 aa12.97□□□□□ -0.33
SREBF1-209ENST00000470247 A0A0G2JMZ2 1700 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 SMCO2A6NFE2 343 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 M0R2N6 131 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 BRD1O95696 1058 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 MMP1P03956 469 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 BCRP11274 1271 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 PDCP20941 246 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 GCLCP48506 637 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-209ENST00000470247 MUM1L1Q5H9M0 696 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 C17orf99Q6UX52 265 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms