RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 GLT8D2Q9H1C3 349 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 RIC8AQ9NPQ8 531 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 FEM1BQ9UK73 627 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 PRR12Q9ULL5 1215 aa17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 ISY1Q9ULR0 285 aaKnown RBP17.18■□□□□ 0.34
CRAMP1-206ENST00000468839 CCDC194A0A1B0GVG4 234 aa17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 POTECB2RU33 542 aa17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 WDR46O15213 610 aaKnown RBP17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 PTPRAP18433 802 aa17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 USP14P54578 494 aa17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 TRAF1Q13077 416 aa17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 TTC38Q5R3I4 469 aa17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 PIK3AP1Q6ZUJ8 805 aa17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 SPICE1Q8N0Z3 855 aa17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 AMNQ9BXJ7 453 aa17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 TAF1DQ9H5J8 278 aaPredicted RBP17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 DDX19AQ9NUU7 478 aaKnown RBP17.17■□□□□ 0.34
CRAMP1-206ENST00000468839 PTPREP23469 700 aa17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 CMA1P23946 247 aa17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 ADCY7P51828 1080 aa17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 MRPL12P52815 198 aaKnown RBP17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 IKQ13123 557 aaPredicted RBP17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 FBXO11Q86XK2 927 aa17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 TEX2Q8IWB9 1127 aa17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 ENGASEQ8NFI3 743 aa17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 MRPS27Q92552 414 aaKnown RBP17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 FEZ1Q99689 392 aa17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 SRPRBQ9Y5M8 271 aaKnown RBP17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 COL11A1P12107 1806 aaPredicted RBP17.16■□□□□ 0.34
CRAMP1-206ENST00000468839 FAM237AA0A1B0GTK4 181 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 C19orf81C9J6K1 198 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 ADM5C9JUS6 153 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 SOCS7O14512 581 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 MAP3K9P80192 1104 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 NONOQ15233 471 aaKnown RBP eCLIP17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 ZYXQ15942 572 aaKnown RBP17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 KRT26Q7Z3Y9 468 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 PNMA8AQ86V59 439 aaPredicted RBP17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 REXO1Q8N1G1 1221 aaKnown RBP17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 KRI1Q8N9T8 703 aaKnown RBP17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 FSIP1Q8NA03 581 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 ZNF579Q8NAF0 562 aaKnown RBP17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 ZNF280CQ8ND82 737 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 RASGRP4Q8TDF6 673 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 CUL5Q93034 780 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 ZKSCAN4Q969J2 545 aaPredicted RBP17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 RANBP17Q9H2T7 1088 aaKnown RBP17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
CRAMP1-206ENST00000468839 WNT7AO00755 349 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 PPP1R12BO60237 982 aaPredicted RBP17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 ATP2B1P20020 1258 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 BACE1P56817 501 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 FAM160A1Q05DH4 1040 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 TPRNQ4KMQ1 711 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 MCTP2Q6DN12 878 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 CCDC73Q6ZRK6 1079 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 C12orf42Q96LP6 360 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 GOLPH3LQ9H4A5 285 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 EMILIN3Q9NT22 766 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 DACT1Q9NYF0 836 aa17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 FBXO2Q9UK22 296 aaPredicted RBP17.14■□□□□ 0.33
CRAMP1-206ENST00000468839 NR1I2O75469 434 aa17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 ATP2C1P98194 919 aaPredicted RBP17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 SPP2Q13103 211 aa17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 ORC2Q13416 577 aaPredicted RBP17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 SNW1Q13573 536 aaKnown RBP17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 ZNF174Q15697 407 aa17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 FERMT2Q96AC1 680 aa17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 CLSTN2Q9H4D0 955 aa17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 PSTPIP2Q9H939 334 aa17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 BIN2Q9UBW5 565 aaPredicted RBP17.13■□□□□ 0.33
CRAMP1-206ENST00000468839 RBBP6Q7Z6E9 1792 aaKnown RBP17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 FSD2A1L4K1 749 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 NF2P35240 595 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 MAP3K11Q16584 847 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 INF2Q27J81 1249 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 JAKMIP3Q5VZ66 844 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 SHC4Q6S5L8 630 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 LRSAM1Q6UWE0 723 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 FMR1NBQ8N0W7 255 aaPredicted RBP17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 C4orf32Q8N8J7 132 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 PRPF38AQ8NAV1 312 aaKnown RBP17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 NUP62CLQ9H1M0 184 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 FZD1Q9UP38 647 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 HPSEQ9Y251 543 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 AFG3L2Q9Y4W6 797 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 ZHX2Q9Y6X8 837 aa17.12■□□□□ 0.33
CRAMP1-206ENST00000468839 LOC285556D6RIA3 1793 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 A0A1B0GVL5 298 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 SYCE3A1L190 88 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 FDX1P10109 184 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 IREB2P48200 963 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms