RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ESYT2A0FGR8 921 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 GLTPD2A6NH11 291 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 ADM5C9JUS6 153 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 OPLAHO14841 1288 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 SPTLC2O15270 562 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 PPP6R2O75170 966 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 USP2O75604 605 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-208ENST00000468300 ASNSP08243 561 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 TAL1P17542 331 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-208ENST00000468300 SNAP25P60880 206 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 ADALQ6DHV7 355 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 P2RX7Q99572 595 aaKnown RBP9.47□□□□□ -0.89
BRCA1-208ENST00000468300 VCPKMTQ9H867 229 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 FBXO2Q9UK22 296 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-208ENST00000468300 MYH7BA7E2Y1 1941 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 ZC3H4Q9UPT8 1303 aaKnown RBP9.47□□□□□ -0.89
BRCA1-208ENST00000468300 BMP3P12645 472 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 XBP1P17861 261 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 IL17AQ16552 155 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 CCDC96Q2M329 555 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 QRICH1Q2TAL8 776 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 RILPL1Q5EBL4 403 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 SHC4Q6S5L8 630 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 PRDM4Q9UKN5 801 aa9.47□□□□□ -0.89
BRCA1-208ENST00000468300 FAM237AA0A1B0GTK4 181 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 A0A1W2PQ27 194 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 A0A1W2PQ64 194 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 A0A1W2PQD8 194 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 MARCKSP29966 332 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-208ENST00000468300 SAFBQ15424 915 aaKnown RBP eCLIP9.46□□□□□ -0.89
BRCA1-208ENST00000468300 GPR162Q16538 588 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 FAM83BQ5T0W9 1011 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 PIK3AP1Q6ZUJ8 805 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.46□□□□□ -0.89
BRCA1-208ENST00000468300 FUCA2Q9BTY2 467 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 ARHGEF10LQ9HCE6 1279 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 COL11A1P12107 1806 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-208ENST00000468300 LOC285556D6RIA3 1793 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 SMCO2A6NFE2 343 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 TMEM232C9JQI7 657 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 PLA2G6O60733 806 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 PTPRAP18433 802 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 GALNT17Q6IS24 598 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 FMR1NBQ8N0W7 255 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-208ENST00000468300 KCNG4Q8TDN1 519 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 CLIC6Q96NY7 704 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 ZNF341Q9BYN7 854 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 TMEM260Q9NX78 707 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 PRR12Q9ULL5 1215 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 HPSEQ9Y251 543 aa9.46□□□□□ -0.89
BRCA1-208ENST00000468300 hCG_1984214I3L0E3 225 aa9.46□□□□□ -0.9
BRCA1-208ENST00000468300 CALML3P27482 149 aa9.46□□□□□ -0.9
BRCA1-208ENST00000468300 CDC37Q16543 378 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-208ENST00000468300 NOL9Q5SY16 702 aaKnown RBP9.46□□□□□ -0.9
BRCA1-208ENST00000468300 RBM43Q6ZSC3 357 aaKnown RBP9.46□□□□□ -0.9
BRCA1-208ENST00000468300 SCYL3Q8IZE3 742 aa9.46□□□□□ -0.9
BRCA1-208ENST00000468300 ZNF713Q8N859 430 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-208ENST00000468300 KIAA1683Q9H0B3 1180 aa9.46□□□□□ -0.9
BRCA1-208ENST00000468300 GINM1Q9NU53 330 aa9.46□□□□□ -0.9
BRCA1-208ENST00000468300 NDUFA8P51970 172 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 NAPAP54920 295 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 ZYXQ15942 572 aaKnown RBP9.45□□□□□ -0.9
BRCA1-208ENST00000468300 SYDE2Q5VT97 1194 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 CCAR1Q8IX12 1150 aaKnown RBP9.45□□□□□ -0.9
BRCA1-208ENST00000468300 SGSM3Q96HU1 749 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 DACT1Q9NYF0 836 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 SEC63Q9UGP8 760 aaKnown RBP9.45□□□□□ -0.9
BRCA1-208ENST00000468300 SYCE3A1L190 88 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 PTPREP23469 700 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 EPHX2P34913 555 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 ME1P48163 572 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 GNL2Q13823 731 aaKnown RBP9.45□□□□□ -0.9
BRCA1-208ENST00000468300 STK38Q15208 465 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 PPP1R18Q6NYC8 613 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-208ENST00000468300 USP50Q70EL3 339 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-208ENST00000468300 CCDC148Q8NFR7 591 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 WRNIP1Q96S55 665 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 WDR18Q9BV38 432 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 RANBP17Q9H2T7 1088 aaKnown RBP9.45□□□□□ -0.9
BRCA1-208ENST00000468300 TAF1DQ9H5J8 278 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-208ENST00000468300 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 RIC8AQ9NPQ8 531 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 FBXO28Q9NVF7 368 aa9.45□□□□□ -0.9
BRCA1-208ENST00000468300 RBBP6Q7Z6E9 1792 aaKnown RBP9.45□□□□□ -0.9
BRCA1-208ENST00000468300 LMOD1P29536 600 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-208ENST00000468300 CCDC183Q5T5S1 534 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 RESP18Q5W5W9 173 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 SNCAIPQ9Y6H5 919 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 ZNF536O15090 1300 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 A0A0G2JMZ2 1700 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 A0A1B0GVL5 298 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 MEIS2O14770 477 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 GRIN3BO60391 1043 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 POTEIP0CG38 1075 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 POTEJP0CG39 1038 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 CMA1P23946 247 aa9.44□□□□□ -0.9
BRCA1-208ENST00000468300 ATP2C1P98194 919 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-208ENST00000468300 ZNF174Q15697 407 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms