RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 USP2O75604 605 aaPredicted RBP6.12□□□□□ -1.43
SMC4-208ENST00000467468 VAV1P15498 845 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 CTSKP43235 329 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 ZNF445P59923 1031 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 POU4F1Q01851 419 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 PKN1Q16512 942 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 MLANAQ16655 118 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 CEP128Q6ZU80 1094 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 FAM169BQ8N8A8 192 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 BRF1Q92994 677 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 MKL1Q969V6 931 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 LIN37Q96GY3 246 aaPredicted RBP6.12□□□□□ -1.43
SMC4-208ENST00000467468 G6PC3Q9BUM1 346 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 ACTR10Q9NZ32 417 aa6.12□□□□□ -1.43
SMC4-208ENST00000467468 DIS3Q9Y2L1 958 aaKnown RBP6.12□□□□□ -1.43
SMC4-208ENST00000467468 H0Y8X5 98 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 CBFA2T2O43439 604 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 TRHRP34981 398 aaPredicted RBP6.11□□□□□ -1.43
SMC4-208ENST00000467468 ZNF143P52747 638 aaPredicted RBP6.11□□□□□ -1.43
SMC4-208ENST00000467468 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
SMC4-208ENST00000467468 BMS1Q14692 1282 aaKnown RBP6.11□□□□□ -1.43
SMC4-208ENST00000467468 KIAA1211LQ6NV74 962 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 ADAT2Q7Z6V5 191 aaKnown RBP6.11□□□□□ -1.43
SMC4-208ENST00000467468 KSR1Q8IVT5 923 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 NLGN1Q8N2Q7 840 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 CRACR2BQ8N4Y2 399 aaPredicted RBP6.11□□□□□ -1.43
SMC4-208ENST00000467468 ZDHHC15Q96MV8 337 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 RNF32Q9H0A6 362 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 KLHL25Q9H0H3 589 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 NOL6Q9H6R4 1146 aaKnown RBP6.11□□□□□ -1.43
SMC4-208ENST00000467468 C19orf44Q9H6X5 657 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 PRKAG3Q9UGI9 489 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 PCDHB10Q9UN67 800 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 R3HCC1Q9Y3T6 440 aaKnown RBP6.11□□□□□ -1.43
SMC4-208ENST00000467468 MRVI1Q9Y6F6 885 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 TAF6LQ9Y6J9 622 aa6.11□□□□□ -1.43
SMC4-208ENST00000467468 ANKRD34BA5PLL1 514 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 WTIPA6NIX2 430 aaPredicted RBP6.1□□□□□ -1.43
SMC4-208ENST00000467468 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.1□□□□□ -1.43
SMC4-208ENST00000467468 SMAD7O15105 426 aaKnown RBP6.1□□□□□ -1.43
SMC4-208ENST00000467468 NRDCO43847 1150 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 EPHX1P07099 455 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 GSTM1P09488 218 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 RTP1P59025 263 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 GALNT18Q6P9A2 607 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 CYP2R1Q6VVX0 501 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 JAZF1Q86VZ6 243 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 IRF2BP1Q8IU81 584 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 KLHL6Q8WZ60 621 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 MRFAP1L1Q96HT8 127 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 HHIPL1Q96JK4 782 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 FAM84AQ96KN4 292 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 PPP1R16BQ96T49 567 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 EPB41L4BQ9H329 900 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 AP5S1Q9NUS5 200 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 ERVK13-1Q9NX77 482 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.1□□□□□ -1.432e-7■■■■□ 26.2
SMC4-208ENST00000467468 SIRPGQ9P1W8 387 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 GPR55Q9Y2T6 319 aaPredicted RBP6.1□□□□□ -1.43
SMC4-208ENST00000467468 YBX2Q9Y2T7 364 aaKnown RBP6.1□□□□□ -1.43
SMC4-208ENST00000467468 SUGT1Q9Y2Z0 365 aa6.1□□□□□ -1.43
SMC4-208ENST00000467468 A0A1W2PQ45 241 aaPredicted RBP6.09□□□□□ -1.43
SMC4-208ENST00000467468 A0A1W2PQY0 241 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 PPM1GO15355 546 aaPredicted RBP6.09□□□□□ -1.43
SMC4-208ENST00000467468 KLF4O43474 513 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 CD3EP07766 207 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 ETFBP38117 255 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 PPP2R5DQ14738 602 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 EGFLAMQ63HQ2 1017 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 ZPBP2Q6X784 338 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 PRR23BQ6ZRT6 265 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 ANKS3Q6ZW76 656 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 FBXO15Q8NCQ5 510 aaPredicted RBP6.09□□□□□ -1.43
SMC4-208ENST00000467468 ADCY4Q8NFM4 1077 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 INTS4Q96HW7 963 aaKnown RBP6.09□□□□□ -1.43
SMC4-208ENST00000467468 SLC12A9Q9BXP2 914 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 NSUN3Q9H649 340 aaKnown RBP6.09□□□□□ -1.43
SMC4-208ENST00000467468 SP110Q9HB58 689 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 GOLGA2P5Q9HBQ8 144 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 DCP1AQ9NPI6 582 aaPredicted RBP6.09□□□□□ -1.43
SMC4-208ENST00000467468 CRTAC1Q9NQ79 661 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 EBF1Q9UH73 591 aa6.09□□□□□ -1.43
SMC4-208ENST00000467468 FADS2P1A8MWK0 482 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 PSPNO60542 156 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 YBX3P16989 372 aaKnown RBP eCLIP6.08□□□□□ -1.44
SMC4-208ENST00000467468 ARL4AP40617 200 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 GRB10Q13322 594 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 RAB33AQ14088 237 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 FXNQ16595 210 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 TIGD5Q53EQ6 642 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 RTP2Q5QGT7 225 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 HLA-DQA1Q5Y7H0 255 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 LARP1BQ659C4 914 aaKnown RBP6.08□□□□□ -1.44
SMC4-208ENST00000467468 POMZP3Q6PJE2 187 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 ZNF662Q6ZS27 426 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 NLRX1Q86UT6 975 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 JAMLQ86YT9 394 aa6.08□□□□□ -1.44
SMC4-208ENST00000467468 BHLHE22Q8NFJ8 381 aaPredicted RBP6.08□□□□□ -1.44
SMC4-208ENST00000467468 RCC1LQ96I51 464 aaKnown RBP6.08□□□□□ -1.44
SMC4-208ENST00000467468 FGD4Q96M96 766 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms