RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 PYM1Q9BRP8 204 aaKnown RBP11.73□□□□□ -0.53
UFD1-206ENST00000466373 BIN2Q9UBW5 565 aaPredicted RBP11.73□□□□□ -0.53
UFD1-206ENST00000466373 LIMA1Q9UHB6 759 aaKnown RBP11.73□□□□□ -0.53
UFD1-206ENST00000466373 MRFAP1Q9Y605 127 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 SBF2Q86WG5 1849 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 FLT1P17948 1338 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 EFCAB8A8MWE9 144 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 TECP42680 631 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 ERVK-24P63145 666 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 IRF2BP1Q8IU81 584 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 PIGSQ96S52 555 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 SRRTQ9BXP5 876 aaKnown RBP11.73□□□□□ -0.53
UFD1-206ENST00000466373 GGA1Q9UJY5 639 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 MAST2Q6P0Q8 1798 aa11.73□□□□□ -0.53
UFD1-206ENST00000466373 USP17L5A8MUK1 530 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 PLCG1P19174 1290 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 KRT9P35527 623 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 HPS3Q969F9 1004 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 SLF1Q9BQI6 1058 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 ABHD10Q9NUJ1 306 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 POLLQ9UGP5 575 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 PUF60Q9UHX1 559 aaKnown RBP11.72□□□□□ -0.53
UFD1-206ENST00000466373 ROBO3Q96MS0 1386 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 KIF5CO60282 957 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 CCDC178Q5BJE1 867 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 ADSSL1Q8N142 457 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 LRRC47Q8N1G4 583 aaKnown RBP11.72□□□□□ -0.53
UFD1-206ENST00000466373 TRIM47Q96LD4 638 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 CHP1Q99653 195 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 TCP11L1Q9NUJ3 509 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 TMEM260Q9NX78 707 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 ZNF831Q5JPB2 1677 aa11.72□□□□□ -0.53
UFD1-206ENST00000466373 LRRC10BA6NIK2 292 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 TMCO3Q6UWJ1 677 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 CABP7Q86V35 215 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 NAA15Q9BXJ9 866 aaKnown RBP11.71□□□□□ -0.53
UFD1-206ENST00000466373 SEC63Q9UGP8 760 aaKnown RBP11.71□□□□□ -0.53
UFD1-206ENST00000466373 FHOD1Q9Y613 1164 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 GPR75-ASB3A0A0A6YYF3 556 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 KLRC4O43908 158 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 SERPINB2P05120 415 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 GTF2IP78347 998 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 SPAG1Q07617 926 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 C16orf86Q6ZW13 317 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 FNBP4Q8N3X1 1017 aaPredicted RBP11.71□□□□□ -0.53
UFD1-206ENST00000466373 ZNF287Q9HBT7 754 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 TFR2Q9UP52 801 aa11.71□□□□□ -0.53
UFD1-206ENST00000466373 SNED1Q8TER0 1413 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 NAV1Q8NEY1 1877 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 OR52Z1P0C646 297 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 SLURP2P0DP57 97 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 TXKP42681 527 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 RHBDL3P58872 404 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 NONOQ15233 471 aaKnown RBP eCLIP11.71□□□□□ -0.54
UFD1-206ENST00000466373 SOGA3Q5TF21 947 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 ZNF771Q7L3S4 317 aaPredicted RBP11.71□□□□□ -0.54
UFD1-206ENST00000466373 NEDD1Q8NHV4 660 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 TBCKQ8TEA7 893 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 RRP36Q96EU6 259 aaKnown RBP11.71□□□□□ -0.54
UFD1-206ENST00000466373 PKNOX2Q96KN3 472 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 ZMYND12Q9H0C1 365 aa11.71□□□□□ -0.54
UFD1-206ENST00000466373 ARGLU1Q9NWB6 273 aaPredicted RBP11.71□□□□□ -0.54
UFD1-206ENST00000466373 TTC26A0AVF1 554 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 H7C1D1 291 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 PNMA6AP0CW24 399 aaPredicted RBP11.7□□□□□ -0.54
UFD1-206ENST00000466373 FCER1AP12319 257 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 ASIC1P78348 528 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 BMS1Q14692 1282 aaKnown RBP11.7□□□□□ -0.54
UFD1-206ENST00000466373 KIF4BQ2VIQ3 1234 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 POTEDQ86YR6 584 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 SLC35F6Q8N357 371 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 DAGLBQ8NCG7 672 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 COA7Q96BR5 231 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 UIMC1Q96RL1 719 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 GTPBP4Q9BZE4 634 aaKnown RBP11.7□□□□□ -0.54
UFD1-206ENST00000466373 C6orf50Q9HD87 102 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 KBTBD4Q9NVX7 518 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 ITIH6Q6UXX5 1313 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 PSMA7O14818 248 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 GYS1P13807 737 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 ST5P78524 1137 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 PDE4DQ08499 809 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 STK4Q13043 487 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 TMED8Q6PL24 325 aaPredicted RBP11.7□□□□□ -0.54
UFD1-206ENST00000466373 TBC1D16Q8TBP0 767 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 SPZ1Q9BXG8 430 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 TRIM10Q9UDY6 481 aa11.7□□□□□ -0.54
UFD1-206ENST00000466373 B4DLN1 442 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 NKRFO15226 690 aaKnown RBP eCLIP11.69□□□□□ -0.54
UFD1-206ENST00000466373 ERCC3P19447 782 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 GALNT17Q6IS24 598 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 NEK8Q86SG6 692 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 TMTC1Q8IUR5 882 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 CSGALNACT2Q8N6G5 542 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 CCSER1Q9C0I3 900 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 GPCPD1Q9NPB8 672 aa11.69□□□□□ -0.54
UFD1-206ENST00000466373 IL1R1P14778 569 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms