RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 C12orf50Q8NA57 414 aaPredicted RBP8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 WHAMMQ8TF30 809 aa8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 XAGE3Q8WTP9 111 aa8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 PPP1R13LQ8WUF5 828 aa8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 ZNF512BQ96KM6 892 aaPredicted RBP8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 FGD4Q96M96 766 aa8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 CDC6Q99741 560 aa8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 DHRS4Q9BTZ2 278 aa8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 RRAGCQ9HB90 399 aa8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 NCOA5Q9HCD5 579 aaKnown RBP8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 APEX2Q9UBZ4 518 aa8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 MRPS23Q9Y3D9 190 aaKnown RBP8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 CCDC144AA2RUR9 1427 aa8.09□□□□□ -1.11
PRPF4B-204ENST00000466185 LMTK3Q96Q04 1460 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 CLTCL1P53675 1640 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 IRS4O14654 1257 aaPredicted RBP8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 ITGAVP06756 1048 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 PPP2R2AP63151 447 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 PLEKHG6Q3KR16 790 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 DCAF15Q66K64 600 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 ZNF227Q86WZ6 799 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 THNSL2Q86YJ6 484 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 C2CD4AQ8NCU7 369 aaPredicted RBP8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 AARSD1Q9BTE6 412 aaKnown RBP8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 LGR4Q9BXB1 951 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 FOXQ1Q9C009 403 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 SSU72Q9NP77 194 aaKnown RBP8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 FAM105AQ9NUU6 356 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 LRP2BPQ9P2M1 347 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 ACTL7BQ9Y614 415 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 ADGRB3O60242 1522 aa8.08□□□□□ -1.12
PRPF4B-204ENST00000466185 TRBV23-1A0A0A0MS06 115 aa8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 SPDYE3A6NKU9 549 aa8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 PLD2O14939 933 aa8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 MYCLP1P12525 358 aaPredicted RBP8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 IGF2-ASQ6U949 168 aa8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 ARMCX6Q7L4S7 300 aa8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 SMYD4Q8IYR2 804 aaPredicted RBP8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 LRRN4CLQ8ND94 238 aa8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 PPP1R14AQ96A00 147 aa8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 MRPL18Q9H0U6 180 aaKnown RBP8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 ZNF451Q9Y4E5 1061 aa8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 KDM5AP29375 1690 aaKnown RBP8.07□□□□□ -1.12
PRPF4B-204ENST00000466185 SETD1BQ9UPS6 1966 aaKnown RBP8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 NEURL4Q96JN8 1562 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 A0A087X0B3 334 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 WIPF1O43516 503 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 LRIG2O94898 1065 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 CAPNS1P04632 268 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 INSM1Q01101 510 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 FNDC3BQ53EP0 1204 aaKnown RBP8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 ANKRD39Q53RE8 183 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 NBPF12Q5TAG4 269 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 FDX2Q6P4F2 183 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 LINC00114Q6XXX2 140 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 SCUBE1Q8IWY4 988 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 DNAJB8Q8NHS0 232 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 CHAC2Q8WUX2 184 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 CLUHP3Q96NS8 147 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 PLVAPQ9BX97 442 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 FAM126AQ9BYI3 521 aaPredicted RBP8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 MKRN2Q9H000 416 aaKnown RBP8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 GBP3Q9H0R5 595 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 IRF2BPLQ9H1B7 796 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 PCOLCE2Q9UKZ9 415 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 TMEM131LA2VDJ0 1609 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 UBR1Q8IWV7 1749 aa8.06□□□□□ -1.12
PRPF4B-204ENST00000466185 CLSPNQ9HAW4 1339 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 CFAP65Q6ZU64 1925 aaKnown RBP8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 SPATA31E1Q6ZUB1 1445 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 FAM229AH3BQW9 127 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 SHOXO15266 292 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 POU3F3P20264 500 aaPredicted RBP8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 CNGA1P29973 690 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 GMPRP36959 345 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 STAT3P40763 770 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 GRIA2P42262 883 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 ADAT2Q7Z6V5 191 aaKnown RBP8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 AGGF1Q8N302 714 aaeCLIP8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 MFSD2AQ8NA29 543 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 NEDD1Q8NHV4 660 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 VWCEQ96DN2 955 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 IPO9Q96P70 1041 aaKnown RBP8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 TYW1Q9NV66 732 aaKnown RBP8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 CEP131Q9UPN4 1083 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 ARHGAP23Q9P227 1491 aa8.05□□□□□ -1.12
PRPF4B-204ENST00000466185 SLIT1O75093 1534 aa8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 KRBA1A5PL33 1030 aa8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 PRODHO43272 600 aa8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 TBX1O43435 398 aa8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 KCNQ2O43526 872 aa8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 FGFR1P11362 822 aa8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 PABPC1P11940 636 aaKnown RBP8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 SNRPNP63162 240 aaKnown RBP8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 TRIM28Q13263 835 aaKnown RBP8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 LCE2CQ5TA81 110 aa8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 ANKRD34AQ69YU3 496 aa8.04□□□□□ -1.12
PRPF4B-204ENST00000466185 JAMLQ86YT9 394 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms