RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 SERPINB2P05120 415 aa18.4■□□□□ 0.54
SLX4-202ENST00000466154 PLCG1P19174 1290 aa18.4■□□□□ 0.54
SLX4-202ENST00000466154 SCNN1DP51172 638 aa18.4■□□□□ 0.54
SLX4-202ENST00000466154 CABP7Q86V35 215 aa18.4■□□□□ 0.54
SLX4-202ENST00000466154 C4orf32Q8N8J7 132 aa18.4■□□□□ 0.54
SLX4-202ENST00000466154 RRP36Q96EU6 259 aaKnown RBP18.4■□□□□ 0.54
SLX4-202ENST00000466154 RWDD2AQ9UIY3 292 aa18.4■□□□□ 0.54
SLX4-202ENST00000466154 POLR3GO15318 223 aaPredicted RBP18.4■□□□□ 0.54
SLX4-202ENST00000466154 CNGA4Q8IV77 575 aa18.4■□□□□ 0.54
SLX4-202ENST00000466154 MAGEC2Q9UBF1 373 aaPredicted RBP18.4■□□□□ 0.54
SLX4-202ENST00000466154 ST5P78524 1137 aa18.4■□□□□ 0.54
SLX4-202ENST00000466154 PANX2Q96RD6 677 aa18.4■□□□□ 0.54
SLX4-202ENST00000466154 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
SLX4-202ENST00000466154 TADA3O75528 432 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 DMTNQ08495 405 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 NAALADL2Q58DX5 795 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 ARL6IP4Q66PJ3 421 aaKnown RBP18.39■□□□□ 0.53
SLX4-202ENST00000466154 TBCKQ8TEA7 893 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 ZNF287Q9HBT7 754 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 FLT1P17948 1338 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 G3V3G9 751 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 TUBB4AP04350 444 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 PDE4DQ08499 809 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 STIM1Q13586 685 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 NONOQ15233 471 aaKnown RBP eCLIP18.39■□□□□ 0.53
SLX4-202ENST00000466154 DCAF8Q5TAQ9 597 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 CHP1Q99653 195 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 POLLQ9UGP5 575 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 GUCA1BQ9UMX6 200 aa18.39■□□□□ 0.53
SLX4-202ENST00000466154 WNK3Q9BYP7 1800 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 MARCH6O60337 910 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 DYMQ7RTS9 669 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 GJA10Q969M2 543 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 C6orf50Q9HD87 102 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 B4DLN1 442 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 DOK7Q18PE1 504 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 ABHD10Q9NUJ1 306 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 ZNF219Q9P2Y4 722 aaPredicted RBP18.38■□□□□ 0.53
SLX4-202ENST00000466154 TRIM10Q9UDY6 481 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 A0A1B0GUL6 1792 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 FCER1AP12319 257 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 IDEP14735 1019 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 ERVK-24P63145 666 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 SLC35F6Q8N357 371 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 CSGALNACT2Q8N6G5 542 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 LRRC15Q8TF66 581 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 PYM1Q9BRP8 204 aaKnown RBP18.38■□□□□ 0.53
SLX4-202ENST00000466154 EXOC1Q9NV70 894 aa18.38■□□□□ 0.53
SLX4-202ENST00000466154 PSMA7O14818 248 aa18.37■□□□□ 0.53
SLX4-202ENST00000466154 OR52Z1P0C646 297 aa18.37■□□□□ 0.53
SLX4-202ENST00000466154 TNNI2P48788 182 aa18.37■□□□□ 0.53
SLX4-202ENST00000466154 TSR1Q2NL82 804 aaKnown RBP18.37■□□□□ 0.53
SLX4-202ENST00000466154 DPP8Q6V1X1 898 aaPredicted RBP18.37■□□□□ 0.53
SLX4-202ENST00000466154 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
SLX4-202ENST00000466154 MORC2Q9Y6X9 1032 aaPredicted RBP18.37■□□□□ 0.53
SLX4-202ENST00000466154 PALM3A6NDB9 673 aaPredicted RBP18.37■□□□□ 0.53
SLX4-202ENST00000466154 ERICH4A6NGS2 130 aa18.37■□□□□ 0.53
SLX4-202ENST00000466154 EFCAB8A8MWE9 144 aa18.37■□□□□ 0.53
SLX4-202ENST00000466154 SLC16A2P36021 539 aa18.37■□□□□ 0.53
SLX4-202ENST00000466154 BMS1Q14692 1282 aaKnown RBP18.37■□□□□ 0.53
SLX4-202ENST00000466154 SLC39A2Q9NP94 309 aa18.37■□□□□ 0.53
SLX4-202ENST00000466154 MRFAP1Q9Y605 127 aa18.37■□□□□ 0.53
SLX4-202ENST00000466154 COL22A1Q8NFW1 1626 aaPredicted RBP18.37■□□□□ 0.53
SLX4-202ENST00000466154 SSBP05455 408 aaKnown RBP eCLIP18.36■□□□□ 0.53
SLX4-202ENST00000466154 KLK7P49862 253 aa18.36■□□□□ 0.53
SLX4-202ENST00000466154 KIFC2Q96AC6 838 aa18.36■□□□□ 0.53
SLX4-202ENST00000466154 SH3GLB2Q9NR46 395 aa18.36■□□□□ 0.53
SLX4-202ENST00000466154 PDS5AQ29RF7 1337 aaKnown RBP18.36■□□□□ 0.53
SLX4-202ENST00000466154 H2AFXP16104 143 aaPredicted RBP18.36■□□□□ 0.53
SLX4-202ENST00000466154 TRIM21P19474 475 aaKnown RBP18.36■□□□□ 0.53
SLX4-202ENST00000466154 MTIF2P46199 727 aaKnown RBP18.36■□□□□ 0.53
SLX4-202ENST00000466154 MAP3K9P80192 1104 aa18.36■□□□□ 0.53
SLX4-202ENST00000466154 SPAG1Q07617 926 aa18.36■□□□□ 0.53
SLX4-202ENST00000466154 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
SLX4-202ENST00000466154 CDK5RAP3Q96JB5 506 aa18.36■□□□□ 0.53
SLX4-202ENST00000466154 NRAPQ86VF7 1730 aa18.36■□□□□ 0.53
SLX4-202ENST00000466154 SCN7AQ01118 1682 aa18.36■□□□□ 0.53
SLX4-202ENST00000466154 CCDC96Q2M329 555 aa18.36■□□□□ 0.53
SLX4-202ENST00000466154 NEK8Q86SG6 692 aa18.36■□□□□ 0.53
SLX4-202ENST00000466154 REXO1Q8N1G1 1221 aaKnown RBP18.36■□□□□ 0.53
SLX4-202ENST00000466154 TTC26A0AVF1 554 aa18.35■□□□□ 0.53
SLX4-202ENST00000466154 RHOXF2BP0C7M4 288 aa18.35■□□□□ 0.53
SLX4-202ENST00000466154 PBX1P40424 430 aa18.35■□□□□ 0.53
SLX4-202ENST00000466154 RHOXF2Q9BQY4 288 aa18.35■□□□□ 0.53
SLX4-202ENST00000466154 ENC1O14682 589 aa18.35■□□□□ 0.53
SLX4-202ENST00000466154 GNA11P29992 359 aa18.35■□□□□ 0.53
SLX4-202ENST00000466154 UBE2SQ16763 222 aa18.35■□□□□ 0.53
SLX4-202ENST00000466154 ADSSL1Q8N142 457 aa18.35■□□□□ 0.53
SLX4-202ENST00000466154 LIMA1Q9UHB6 759 aaKnown RBP18.35■□□□□ 0.53
SLX4-202ENST00000466154 IRS2Q9Y4H2 1338 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 FAM196BA6NMK8 535 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 PNMA6AP0CW24 399 aaPredicted RBP18.34■□□□□ 0.53
SLX4-202ENST00000466154 STK4Q13043 487 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 TBC1D16Q8TBP0 767 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 CCDC47Q96A33 483 aaKnown RBP18.34■□□□□ 0.53
SLX4-202ENST00000466154 LAMB2P55268 1798 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 GYS1P13807 737 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 ATP2B4P23634 1241 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 CACNB3P54284 484 aa18.34■□□□□ 0.53
SLX4-202ENST00000466154 PPP4CP60510 307 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms