RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 RASGRP2Q7LDG7 609 aa15.97■□□□□ 0.15
LIMD1-203ENST00000465039 CHST3Q7LGC8 479 aa15.97■□□□□ 0.15
LIMD1-203ENST00000465039 NBPF11Q86T75 865 aa15.97■□□□□ 0.15
LIMD1-203ENST00000465039 RAET1EQ8TD07 263 aa15.97■□□□□ 0.15
LIMD1-203ENST00000465039 GPCPD1Q9NPB8 672 aa15.97■□□□□ 0.15
LIMD1-203ENST00000465039 MAD2L2Q9UI95 211 aa15.97■□□□□ 0.15
LIMD1-203ENST00000465039 CYP46A1Q9Y6A2 500 aa15.97■□□□□ 0.15
LIMD1-203ENST00000465039 ZNF536O15090 1300 aa15.96■□□□□ 0.15
LIMD1-203ENST00000465039 FRMPD2Q68DX3 1309 aaPredicted RBP15.96■□□□□ 0.15
LIMD1-203ENST00000465039 CAPN2P17655 700 aa15.96■□□□□ 0.15
LIMD1-203ENST00000465039 CASTP20810 708 aaKnown RBP15.96■□□□□ 0.15
LIMD1-203ENST00000465039 KCTD2Q14681 263 aa15.96■□□□□ 0.15
LIMD1-203ENST00000465039 APOA5Q6Q788 366 aa15.96■□□□□ 0.15
LIMD1-203ENST00000465039 NCAPG2Q86XI2 1143 aa15.96■□□□□ 0.15
LIMD1-203ENST00000465039 MTMR8Q96EF0 704 aa15.96■□□□□ 0.15
LIMD1-203ENST00000465039 SPZ1Q9BXG8 430 aa15.96■□□□□ 0.15
LIMD1-203ENST00000465039 MTMR7Q9Y216 660 aa15.96■□□□□ 0.15
LIMD1-203ENST00000465039 DIS3Q9Y2L1 958 aaKnown RBP15.96■□□□□ 0.15
LIMD1-203ENST00000465039 PTCH2Q9Y6C5 1203 aa15.96■□□□□ 0.15
LIMD1-203ENST00000465039 PFASO15067 1338 aa15.95■□□□□ 0.14
LIMD1-203ENST00000465039 FGD1P98174 961 aa15.95■□□□□ 0.14
LIMD1-203ENST00000465039 SLC9C1Q4G0N8 1177 aa15.95■□□□□ 0.14
LIMD1-203ENST00000465039 TTBK2Q6IQ55 1244 aa15.95■□□□□ 0.14
LIMD1-203ENST00000465039 TEX2Q8IWB9 1127 aa15.95■□□□□ 0.14
LIMD1-203ENST00000465039 ALDH8A1Q9H2A2 487 aaPredicted RBP15.95■□□□□ 0.14
LIMD1-203ENST00000465039 RIOX1Q9H6W3 641 aa15.95■□□□□ 0.14
LIMD1-203ENST00000465039 ACAD9Q9H845 621 aa15.95■□□□□ 0.14
LIMD1-203ENST00000465039 UPF2Q9HAU5 1272 aaKnown RBP15.95■□□□□ 0.14
LIMD1-203ENST00000465039 SENP2Q9HC62 589 aa15.95■□□□□ 0.14
LIMD1-203ENST00000465039 RBM28Q9NW13 759 aaKnown RBP15.95■□□□□ 0.14
LIMD1-203ENST00000465039 HPS5Q9UPZ3 1129 aa15.95■□□□□ 0.14
LIMD1-203ENST00000465039 CCDC196A0A1B0GTZ2 297 aa15.94■□□□□ 0.14
LIMD1-203ENST00000465039 PEX10O60683 326 aa15.94■□□□□ 0.14
LIMD1-203ENST00000465039 GOLGA8HP0CJ92 632 aa15.94■□□□□ 0.14
LIMD1-203ENST00000465039 GRK4P32298 578 aa15.94■□□□□ 0.14
LIMD1-203ENST00000465039 SLC16A2P36021 539 aa15.94■□□□□ 0.14
LIMD1-203ENST00000465039 COL9A3Q14050 684 aaPredicted RBP15.94■□□□□ 0.14
LIMD1-203ENST00000465039 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
LIMD1-203ENST00000465039 ADGRF4Q8IZF3 695 aa15.94■□□□□ 0.14
LIMD1-203ENST00000465039 CPXCR1Q8N123 301 aa15.94■□□□□ 0.14
LIMD1-203ENST00000465039 MSL3Q8N5Y2 521 aaKnown RBP15.94■□□□□ 0.14
LIMD1-203ENST00000465039 ABHD8Q96I13 439 aa15.94■□□□□ 0.14
LIMD1-203ENST00000465039 RAVER2Q9HCJ3 691 aaKnown RBP15.94■□□□□ 0.14
LIMD1-203ENST00000465039 CCPG1Q9ULG6 757 aa15.94■□□□□ 0.14
LIMD1-203ENST00000465039 RBBP6Q7Z6E9 1792 aaKnown RBP15.93■□□□□ 0.14
LIMD1-203ENST00000465039 LOC102724159A0A0B4J2E5 919 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 ZBTB5O15062 677 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 ZBTB43O43298 467 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 ADCY3O60266 1144 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 HMGCRP04035 888 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 ADORA2AP29274 412 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 PWP2Q15269 919 aaKnown RBP15.93■□□□□ 0.14
LIMD1-203ENST00000465039 CDC37Q16543 378 aaPredicted RBP15.93■□□□□ 0.14
LIMD1-203ENST00000465039 WDR78Q5VTH9 848 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 OLFML2BQ68BL8 750 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 ZNF467Q7Z7K2 595 aaPredicted RBP15.93■□□□□ 0.14
LIMD1-203ENST00000465039 SAMD3Q8N6K7 520 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 FANCBQ8NB91 859 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 RGS22Q8NE09 1264 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 MMP19Q99542 508 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 JMJD4Q9H9V9 463 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 GPHNQ9NQX3 736 aaPredicted RBP15.93■□□□□ 0.14
LIMD1-203ENST00000465039 RNF146Q9NTX7 359 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 GABRQQ9UN88 632 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 ABCB11O95342 1321 aa15.93■□□□□ 0.14
LIMD1-203ENST00000465039 DNAJC25-GNG10A0A024R161 153 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 IGHA2P01877 340 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 RBM25P49756 843 aaKnown RBP15.92■□□□□ 0.14
LIMD1-203ENST00000465039 UBXN2AP68543 259 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 GHRHRQ02643 423 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 ANKRD1Q15327 319 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 Q6ZUG5 572 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 MICU3Q86XE3 530 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 STAG2Q8N3U4 1231 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 NUP133Q8WUM0 1156 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 ZNF333Q96JL9 665 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 AMNQ9BXJ7 453 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
LIMD1-203ENST00000465039 NRBP1Q9UHY1 535 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 RIPK3Q9Y572 518 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 MYH6P13533 1939 aa15.92■□□□□ 0.14
LIMD1-203ENST00000465039 KLF18A0A0U1RQI7 1052 aa15.91■□□□□ 0.14
LIMD1-203ENST00000465039 DHX16O60231 1041 aaKnown RBP15.91■□□□□ 0.14
LIMD1-203ENST00000465039 QRICH1Q2TAL8 776 aa15.91■□□□□ 0.14
LIMD1-203ENST00000465039 CCDC174Q6PII3 467 aa15.91■□□□□ 0.14
LIMD1-203ENST00000465039 TMTC3Q6ZXV5 915 aa15.91■□□□□ 0.14
LIMD1-203ENST00000465039 DPP9Q86TI2 863 aa15.91■□□□□ 0.14
LIMD1-203ENST00000465039 BRF1Q92994 677 aa15.91■□□□□ 0.14
LIMD1-203ENST00000465039 AGBL1Q96MI9 1066 aa15.91■□□□□ 0.14
LIMD1-203ENST00000465039 TRERF1Q96PN7 1200 aa15.91■□□□□ 0.14
LIMD1-203ENST00000465039 LRRC2Q9BYS8 371 aa15.91■□□□□ 0.14
LIMD1-203ENST00000465039 UBA5Q9GZZ9 404 aa15.91■□□□□ 0.14
LIMD1-203ENST00000465039 MAP3K20Q9NYL2 800 aaKnown RBP15.91■□□□□ 0.14
LIMD1-203ENST00000465039 PNMA6FA0A0J9YX94 578 aa15.9■□□□□ 0.14
LIMD1-203ENST00000465039 SEC24BO95487 1268 aa15.9■□□□□ 0.14
LIMD1-203ENST00000465039 ALAS1P13196 640 aa15.9■□□□□ 0.14
LIMD1-203ENST00000465039 RTN1Q16799 776 aa15.9■□□□□ 0.14
LIMD1-203ENST00000465039 MAP3K21Q5TCX8 1036 aa15.9■□□□□ 0.14
LIMD1-203ENST00000465039 FBXO11Q86XK2 927 aa15.9■□□□□ 0.14
LIMD1-203ENST00000465039 MCF2L2Q86YR7 1114 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms