RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 BADQ92934 168 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 TRERF1Q96PN7 1200 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 STARD7Q9NQZ5 370 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.33■□□□□ 0.2
RPP40-203ENST00000464646 SYNGAP1Q96PV0 1343 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 SALL3Q9BXA9 1300 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 A0A1W2PQ45 241 aaPredicted RBP16.32■□□□□ 0.2
RPP40-203ENST00000464646 A0A1W2PQY0 241 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 FGAP02671 866 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 TLE2Q04725 743 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 NSMFQ6X4W1 530 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 ARMCX2Q7L311 632 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 RASGRP2Q7LDG7 609 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 SLC17A8Q8NDX2 589 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 NUP133Q8WUM0 1156 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 GMCL1Q96IK5 515 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 GPCPD1Q9NPB8 672 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 PHF24Q9UPV7 400 aa16.32■□□□□ 0.2
RPP40-203ENST00000464646 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.32■□□□□ 0.2
RPP40-203ENST00000464646 FRMPD2Q68DX3 1309 aaPredicted RBP16.31■□□□□ 0.2
RPP40-203ENST00000464646 SYNRGQ9UMZ2 1314 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 RAG1P15918 1043 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 MFAP1P55081 439 aaKnown RBP16.31■□□□□ 0.2
RPP40-203ENST00000464646 CNTN2Q02246 1040 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 KCNA10Q16322 511 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 CCDC144CPQ8IYA2 1237 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 FAM161BQ96MY7 647 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 ABHD16BQ9H3Z7 469 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 PDLIM7Q9NR12 457 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 IL17RBQ9NRM6 502 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 DIAPH3Q9NSV4 1193 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 TMEM39AQ9NV64 488 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 PRR12Q9ULL5 1215 aa16.31■□□□□ 0.2
RPP40-203ENST00000464646 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 DNAJC25-GNG10A0A024R161 153 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 DCDC2CA8MYV0 355 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 FOXP2O15409 715 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 CLTBP09497 229 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 HSPD1P10809 573 aaKnown RBP16.3■□□□□ 0.2
RPP40-203ENST00000464646 SLC16A2P36021 539 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 TKFCQ3LXA3 575 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 CCDC144BQ3MJ40 725 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 MFSD6Q6ZSS7 791 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 EEPD1Q7L9B9 569 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 ZNF589Q86UQ0 364 aaPredicted RBP16.3■□□□□ 0.2
RPP40-203ENST00000464646 CHD1LQ86WJ1 897 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 EXOC6Q8TAG9 804 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 GLT1D1Q96MS3 346 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 TACC3Q9Y6A5 838 aa16.3■□□□□ 0.2
RPP40-203ENST00000464646 TRIM43BA6NCK2 446 aa16.29■□□□□ 0.2
RPP40-203ENST00000464646 ORC4O43929 436 aa16.29■□□□□ 0.2
RPP40-203ENST00000464646 DUSP11O75319 330 aaKnown RBP16.29■□□□□ 0.2
RPP40-203ENST00000464646 TOP1P11387 765 aaKnown RBP16.29■□□□□ 0.2
RPP40-203ENST00000464646 ACLYP53396 1101 aa16.29■□□□□ 0.2
RPP40-203ENST00000464646 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
RPP40-203ENST00000464646 AAMPQ13685 434 aa16.29■□□□□ 0.2
RPP40-203ENST00000464646 SHHQ15465 462 aa16.29■□□□□ 0.2
RPP40-203ENST00000464646 ALX1Q15699 326 aa16.29■□□□□ 0.2
RPP40-203ENST00000464646 GNASQ5JWF2 1037 aa16.29■□□□□ 0.2
RPP40-203ENST00000464646 TTBK2Q6IQ55 1244 aa16.29■□□□□ 0.2
RPP40-203ENST00000464646 MAMDC4Q6UXC1 1216 aa16.29■□□□□ 0.2
RPP40-203ENST00000464646 ZNF467Q7Z7K2 595 aaPredicted RBP16.29■□□□□ 0.2
RPP40-203ENST00000464646 PCSK9Q8NBP7 692 aaKnown RBP16.29■□□□□ 0.2
RPP40-203ENST00000464646 DCAF4Q8WV16 495 aa16.29■□□□□ 0.2
RPP40-203ENST00000464646 TRIM43Q96BQ3 446 aaPredicted RBP16.29■□□□□ 0.2
RPP40-203ENST00000464646 TSEN34Q9BSV6 310 aaKnown RBP16.29■□□□□ 0.2
RPP40-203ENST00000464646 A1CFQ9NQ94 594 aaKnown RBP16.29■□□□□ 0.2
RPP40-203ENST00000464646 MYADML2A6NDP7 307 aa16.28■□□□□ 0.2
RPP40-203ENST00000464646 ASB14A6NK59 587 aa16.28■□□□□ 0.2
RPP40-203ENST00000464646 ADAMTS4O75173 837 aa16.28■□□□□ 0.2
RPP40-203ENST00000464646 SDSP20132 328 aa16.28■□□□□ 0.2
RPP40-203ENST00000464646 IRX5P78411 483 aaPredicted RBP16.28■□□□□ 0.2
RPP40-203ENST00000464646 TNFAIP2Q03169 654 aa16.28■□□□□ 0.2
RPP40-203ENST00000464646 SNX17Q15036 470 aa16.28■□□□□ 0.2
RPP40-203ENST00000464646 MUM1L1Q5H9M0 696 aa16.28■□□□□ 0.2
RPP40-203ENST00000464646 SYDE2Q5VT97 1194 aa16.28■□□□□ 0.2
RPP40-203ENST00000464646 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
RPP40-203ENST00000464646 TMEM47Q9BQJ4 181 aa16.28■□□□□ 0.2
RPP40-203ENST00000464646 ZKSCAN3Q9BRR0 538 aa16.28■□□□□ 0.2
RPP40-203ENST00000464646 ZNF536O15090 1300 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 PTPDC1A2A3K4 754 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 MOXD2PA6NHM9 499 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 ZNF213O14771 459 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 IGHDP01880 384 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 ASGR1P07306 291 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 BEX3Q00994 111 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 C9orf50Q5SZB4 431 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 AKNAD1Q5T1N1 836 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 ZNF697Q5TEC3 545 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 GPR153Q6NV75 609 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 AP5M1Q9H0R1 490 aa16.27■□□□□ 0.2
RPP40-203ENST00000464646 RNF41Q9H4P4 317 aaPredicted RBP16.27■□□□□ 0.2
RPP40-203ENST00000464646 LTBP2Q14767 1821 aa16.26■□□□□ 0.19
RPP40-203ENST00000464646 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.26■□□□□ 0.19
RPP40-203ENST00000464646 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
RPP40-203ENST00000464646 PLA2G6O60733 806 aa16.26■□□□□ 0.19
RPP40-203ENST00000464646 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms