RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 BARHL2Q9NY43 387 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 ISY1Q9ULR0 285 aaKnown RBP16.58■□□□□ 0.24
COL6A1-202ENST00000463060 CIZ1Q9ULV3 898 aaPredicted RBP16.58■□□□□ 0.24
COL6A1-202ENST00000463060 KIF3AQ9Y496 699 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 ZNF536O15090 1300 aa16.58■□□□□ 0.24
COL6A1-202ENST00000463060 MANSC4A6NHS7 340 aaPredicted RBP16.57■□□□□ 0.24
COL6A1-202ENST00000463060 SPDYE16A6NNV3 312 aaPredicted RBP16.57■□□□□ 0.24
COL6A1-202ENST00000463060 PDIA4P13667 645 aaKnown RBP16.57■□□□□ 0.24
COL6A1-202ENST00000463060 MKRN3Q13064 507 aaKnown RBP16.57■□□□□ 0.24
COL6A1-202ENST00000463060 PKP1Q13835 747 aa16.57■□□□□ 0.24
COL6A1-202ENST00000463060 NPY5RQ15761 445 aa16.57■□□□□ 0.24
COL6A1-202ENST00000463060 CDC37Q16543 378 aaPredicted RBP16.57■□□□□ 0.24
COL6A1-202ENST00000463060 OTUD7BQ6GQQ9 843 aa16.57■□□□□ 0.24
COL6A1-202ENST00000463060 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
COL6A1-202ENST00000463060 ATG4CQ96DT6 458 aa16.57■□□□□ 0.24
COL6A1-202ENST00000463060 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
COL6A1-202ENST00000463060 MTMR6Q9Y217 621 aa16.57■□□□□ 0.24
COL6A1-202ENST00000463060 hCG_1984214I3L0E3 225 aa16.56■□□□□ 0.24
COL6A1-202ENST00000463060 STX6O43752 255 aa16.56■□□□□ 0.24
COL6A1-202ENST00000463060 INHBEP58166 350 aa16.56■□□□□ 0.24
COL6A1-202ENST00000463060 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL6A1-202ENST00000463060 DEFB115Q30KQ5 88 aa16.56■□□□□ 0.24
COL6A1-202ENST00000463060 KRT40Q6A162 431 aa16.56■□□□□ 0.24
COL6A1-202ENST00000463060 FAM43AQ8N2R8 423 aa16.56■□□□□ 0.24
COL6A1-202ENST00000463060 ZNF713Q8N859 430 aaPredicted RBP16.56■□□□□ 0.24
COL6A1-202ENST00000463060 GPKOWQ92917 476 aaPredicted RBP eCLIP16.56■□□□□ 0.24
COL6A1-202ENST00000463060 COA7Q96BR5 231 aa16.56■□□□□ 0.24
COL6A1-202ENST00000463060 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
COL6A1-202ENST00000463060 PHF20Q9BVI0 1012 aa16.56■□□□□ 0.24
COL6A1-202ENST00000463060 SEC63Q9UGP8 760 aaKnown RBP16.56■□□□□ 0.24
COL6A1-202ENST00000463060 SMCHD1A6NHR9 2005 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 ATP2A1O14983 1001 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 BRD1O95696 1058 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 TM4SF4P48230 202 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 HERVK_113P62684 666 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 CYP4F22Q6NT55 531 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 FBXO11Q86XK2 927 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 ZIC5Q96T25 663 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 AMNQ9BXJ7 453 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 ZCCHC17Q9NP64 241 aaKnown RBP16.55■□□□□ 0.24
COL6A1-202ENST00000463060 CHMP5Q9NZZ3 219 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 VPS54Q9P1Q0 977 aa16.55■□□□□ 0.24
COL6A1-202ENST00000463060 ZNF214Q9UL59 606 aaPredicted RBP16.55■□□□□ 0.24
COL6A1-202ENST00000463060 A0A0G2JMZ2 1700 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 ESYT2A0FGR8 921 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 PDHXO00330 501 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 ADAMTS3O15072 1205 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 ZBED4O75132 1171 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 ICAM1P05362 532 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 OAZ1P54368 228 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 GUCY1B3Q02153 619 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 HEATR3Q7Z4Q2 680 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 ZMYND12Q9H0C1 365 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 RBPJLQ9UBG7 517 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 KCNJ14Q9UNX9 436 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 PCDHA1Q9Y5I3 950 aa16.54■□□□□ 0.24
COL6A1-202ENST00000463060 IGF2BP3O00425 579 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL6A1-202ENST00000463060 OPLAHO14841 1288 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 CNMDO75829 334 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 MMP1P03956 469 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 OSBPP22059 807 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 IRX3P78415 501 aaPredicted RBP16.53■□□□□ 0.24
COL6A1-202ENST00000463060 NUCB2P80303 420 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 TRAF1Q13077 416 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 TMEM132BQ14DG7 1078 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 PPP1R18Q6NYC8 613 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 MB21D1Q8N884 522 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 AGBL1Q96MI9 1066 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 BTBD7Q9P203 1132 aa16.53■□□□□ 0.24
COL6A1-202ENST00000463060 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.24
COL6A1-202ENST00000463060 WDR33Q9C0J8 1336 aaKnown RBP16.52■□□□□ 0.24
COL6A1-202ENST00000463060 M0R2N6 131 aa16.52■□□□□ 0.24
COL6A1-202ENST00000463060 ZSCAN22P10073 491 aaPredicted RBP16.52■□□□□ 0.24
COL6A1-202ENST00000463060 XBP1P17861 261 aa16.52■□□□□ 0.24
COL6A1-202ENST00000463060 U2AF2P26368 475 aaKnown RBP eCLIP16.52■□□□□ 0.24
COL6A1-202ENST00000463060 FOSBP53539 338 aa16.52■□□□□ 0.24
COL6A1-202ENST00000463060 KIF23Q02241 960 aaPredicted RBP16.52■□□□□ 0.24
COL6A1-202ENST00000463060 NOGQ13253 232 aa16.52■□□□□ 0.24
COL6A1-202ENST00000463060 CCDC174Q6PII3 467 aa16.52■□□□□ 0.24
COL6A1-202ENST00000463060 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
COL6A1-202ENST00000463060 IFNL1Q8IU54 200 aa16.52■□□□□ 0.24
COL6A1-202ENST00000463060 DAGLBQ8NCG7 672 aa16.52■□□□□ 0.24
COL6A1-202ENST00000463060 CAPNS2Q96L46 248 aa16.52■□□□□ 0.24
COL6A1-202ENST00000463060 RAVER2Q9HCJ3 691 aaKnown RBP16.52■□□□□ 0.24
COL6A1-202ENST00000463060 PNMA2Q9UL42 364 aa16.52■□□□□ 0.24
COL6A1-202ENST00000463060 CYP2C8P10632 490 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 TAL1P17542 331 aaPredicted RBP16.51■□□□□ 0.23
COL6A1-202ENST00000463060 NAPAP54920 295 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 GHRHRQ02643 423 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 GALNT17Q6IS24 598 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 CCDC148Q8NFR7 591 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 CCDC12Q8WUD4 166 aaPredicted RBP16.51■□□□□ 0.23
COL6A1-202ENST00000463060 CLEC4DQ8WXI8 215 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 TNFRSF25Q93038 417 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 TXNRD2Q9NNW7 524 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 PNMA3Q9UL41 463 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 RABGAP1Q9Y3P9 1069 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 RIPK3Q9Y572 518 aa16.51■□□□□ 0.23
COL6A1-202ENST00000463060 ABCB11O95342 1321 aa16.5■□□□□ 0.23
COL6A1-202ENST00000463060 ADGRA2Q96PE1 1338 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 235 ms