RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 CMTR1Q8N1G2 835 aaKnown RBP13.71□□□□□ -0.21
CPNE1-221ENST00000462352 SRBD1Q8N5C6 995 aaKnown RBP13.71□□□□□ -0.21
CPNE1-221ENST00000462352 ZNF274Q96GC6 653 aaPredicted RBP13.71□□□□□ -0.21
CPNE1-221ENST00000462352 LZTS2Q9BRK4 669 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 TEX13BQ9BXU2 312 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 PORCNQ9H237 461 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 RIOX1Q9H6W3 641 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 EFCC1Q9HA90 598 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.21
CPNE1-221ENST00000462352 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.21
CPNE1-221ENST00000462352 ICAM1P05362 532 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 ERCC3P19447 782 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 SMARCA1P28370 1054 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 MAPK4P31152 587 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 ADD1P35611 737 aaKnown RBP13.7□□□□□ -0.22
CPNE1-221ENST00000462352 PSMC4P43686 418 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 FCGRTP55899 365 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 PPP2R5BQ15173 497 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 CDC37Q16543 378 aaPredicted RBP13.7□□□□□ -0.22
CPNE1-221ENST00000462352 NOL8Q76FK4 1167 aaKnown RBP13.7□□□□□ -0.22
CPNE1-221ENST00000462352 RIOX2Q8IUF8 465 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 CCAR1Q8IX12 1150 aaKnown RBP13.7□□□□□ -0.22
CPNE1-221ENST00000462352 SHCBP1Q8NEM2 672 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 MTMR8Q96EF0 704 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 AGBL1Q96MI9 1066 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 SPZ1Q9BXG8 430 aa13.7□□□□□ -0.22
CPNE1-221ENST00000462352 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 TNPO2O14787 897 aaKnown RBP13.69□□□□□ -0.22
CPNE1-221ENST00000462352 FMNL1O95466 1100 aaPredicted RBP13.69□□□□□ -0.22
CPNE1-221ENST00000462352 SLC25A27O95847 323 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 SLC4A3P48751 1232 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 CCT2P78371 535 aaKnown RBP13.69□□□□□ -0.22
CPNE1-221ENST00000462352 STK3Q13188 491 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 QRICH1Q2TAL8 776 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 GPR142Q7Z601 462 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 NCAPG2Q86XI2 1143 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 HOMER1Q86YM7 354 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 CCDC82Q8N4S0 544 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 TRIM47Q96LD4 638 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 PIGSQ96S52 555 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 NCOA5Q9HCD5 579 aaKnown RBP13.69□□□□□ -0.22
CPNE1-221ENST00000462352 CCPG1Q9ULG6 757 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 RIPK3Q9Y572 518 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 ZSWIM8A7E2V4 1837 aa13.69□□□□□ -0.22
CPNE1-221ENST00000462352 ZBTB5O15062 677 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 ST18O60284 1047 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 LARGE1O95461 756 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 TAL1P17542 331 aaPredicted RBP13.68□□□□□ -0.22
CPNE1-221ENST00000462352 COPB2P35606 906 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 FUT2Q10981 343 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 ARHGEF6Q15052 776 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 WDR78Q5VTH9 848 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 PLEKHH3Q7Z736 793 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 IL27Q8NEV9 243 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 SLKQ9H2G2 1235 aaPredicted RBP13.68□□□□□ -0.22
CPNE1-221ENST00000462352 MROH8Q9H579 483 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 CWC22Q9HCG8 908 aaKnown RBP13.68□□□□□ -0.22
CPNE1-221ENST00000462352 PRDM10Q9NQV6 1147 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 CASP8AP2Q9UKL3 1982 aa13.68□□□□□ -0.22
CPNE1-221ENST00000462352 CNTNAP5Q8WYK1 1306 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 PNMA6FA0A0J9YX94 578 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 PFKFB2O60825 505 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 PPP1R11O60927 126 aaPredicted RBP13.67□□□□□ -0.22
CPNE1-221ENST00000462352 ALAS1P13196 640 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 SCRN1Q12765 414 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 NTRK3Q16288 839 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 ME3Q16798 604 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 TKFCQ3LXA3 575 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 USH1GQ495M9 461 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 FBXO11Q86XK2 927 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 CHST13Q8NET6 341 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 PIBF1Q8WXW3 757 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 COA7Q96BR5 231 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 RRP36Q96EU6 259 aaKnown RBP13.67□□□□□ -0.22
CPNE1-221ENST00000462352 TRERF1Q96PN7 1200 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 HOMER2Q9NSB8 354 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 RNF146Q9NTX7 359 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 PNMA2Q9UL42 364 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 LIMCH1Q9UPQ0 1083 aa13.67□□□□□ -0.22
CPNE1-221ENST00000462352 MGAMO43451 1857 aa13.66□□□□□ -0.22
CPNE1-221ENST00000462352 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
CPNE1-221ENST00000462352 GNRH1P01148 92 aa13.66□□□□□ -0.22
CPNE1-221ENST00000462352 IFNAR1P17181 557 aa13.66□□□□□ -0.22
CPNE1-221ENST00000462352 OTOP1Q7RTM1 612 aa13.66□□□□□ -0.22
CPNE1-221ENST00000462352 CTU1Q7Z7A3 348 aaKnown RBP13.66□□□□□ -0.22
CPNE1-221ENST00000462352 AMNQ9BXJ7 453 aa13.66□□□□□ -0.22
CPNE1-221ENST00000462352 ACAD9Q9H845 621 aa13.66□□□□□ -0.22
CPNE1-221ENST00000462352 SEC63Q9UGP8 760 aaKnown RBP13.66□□□□□ -0.22
CPNE1-221ENST00000462352 FBXO40Q9UH90 709 aa13.66□□□□□ -0.22
CPNE1-221ENST00000462352 TRIM17Q9Y577 477 aa13.66□□□□□ -0.22
CPNE1-221ENST00000462352 IVNS1ABPQ9Y6Y0 642 aa13.66□□□□□ -0.22
CPNE1-221ENST00000462352 BAZ2BQ9UIF8 2168 aaKnown RBP13.66□□□□□ -0.22
CPNE1-221ENST00000462352 CPLX1O14810 134 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 STRNO43815 780 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 CD2BP2O95400 341 aaKnown RBP13.65□□□□□ -0.22
CPNE1-221ENST00000462352 FCER1AP12319 257 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 PTPREP23469 700 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 HOXD10P28358 340 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 PRKCZQ05513 592 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 GRB14Q14449 540 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms